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Lag0032201 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0032201
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionCDGSH iron-sulfur domain-containing protein NEET
Genome locationchr11:27152319..27152783
RNA-Seq ExpressionLag0032201
SyntenyLag0032201
Gene Ontology termsGO:0010506 - regulation of autophagy (biological process)
GO:0005741 - mitochondrial outer membrane (cellular component)
GO:0046872 - metal ion binding (molecular function)
GO:0051537 - 2 iron, 2 sulfur cluster binding (molecular function)
InterPro domainsIPR018967 - Iron-binding zinc finger, CDGSH type
IPR042216 - MitoNEET, CDGSH iron-sulfur domain
IPR045131 - CDGSH iron-sulfur domain-containing protein 1/2


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6605678.1 CDGSH iron-sulfur domain-containing protein NEET, partial [Cucurbita argyrosperma subsp. sororia]3.2e-3676.92Show/hide
Query:  MASTVATSSLSIIHPPRRNVNGGGL---RRLVVVRAEGGEPINPAIRKSEDKVVDSVLVAELAKPLTAYCRCWRSGTFPLCDGSHVKHNKATGDNVGPLL
        MAS  ATS+L    PP  N   GG+   R +VVVRAEGG+ INPAIRKSEDKVVDSV+VA+LAKPLT YCRCWRS TFPLCDGSHVKHNKATGDNVGPLL
Subjt:  MASTVATSSLSIIHPPRRNVNGGGL---RRLVVVRAEGGEPINPAIRKSEDKVVDSVLVAELAKPLTAYCRCWRSGTFPLCDGSHVKHNKATGDNVGPLL

Query:  LKKQ
        LKKQ
Subjt:  LKKQ

KAG7035586.1 CDGSH iron-sulfur domain-containing protein NEET [Cucurbita argyrosperma subsp. argyrosperma]9.2e-3676.92Show/hide
Query:  MASTVATSSLSIIHPPRRNVNGGGL---RRLVVVRAEGGEPINPAIRKSEDKVVDSVLVAELAKPLTAYCRCWRSGTFPLCDGSHVKHNKATGDNVGPLL
        MAS  ATS+L    PP  N   GG+   R +VVVRAEGG+ INPAIRKSEDKVVDSV+VA+LAKPLT YCRCWRS TFPLCDGSHVKHNKATGDNVGPLL
Subjt:  MASTVATSSLSIIHPPRRNVNGGGL---RRLVVVRAEGGEPINPAIRKSEDKVVDSVLVAELAKPLTAYCRCWRSGTFPLCDGSHVKHNKATGDNVGPLL

Query:  LKKQ
        LKKQ
Subjt:  LKKQ

XP_022958373.1 CDGSH iron-sulfur domain-containing protein NEET [Cucurbita moschata]4.1e-3676.92Show/hide
Query:  MASTVATSSLSIIHPPRRNVNGGGL---RRLVVVRAEGGEPINPAIRKSEDKVVDSVLVAELAKPLTAYCRCWRSGTFPLCDGSHVKHNKATGDNVGPLL
        MAS  ATS+L    PP  N   GG+   R +VVVRAEGG+ INPAIRKSEDKVVDSV+VA+LAKPLT YCRCWRS TFPLCDGSHVKHNKATGDNVGPLL
Subjt:  MASTVATSSLSIIHPPRRNVNGGGL---RRLVVVRAEGGEPINPAIRKSEDKVVDSVLVAELAKPLTAYCRCWRSGTFPLCDGSHVKHNKATGDNVGPLL

Query:  LKKQ
        LKKQ
Subjt:  LKKQ

XP_022996357.1 CDGSH iron-sulfur domain-containing protein NEET [Cucurbita maxima]1.3e-3779.61Show/hide
Query:  MASTVATSSLSIIHPPRRNVNGGGL--RRLVVVRAEGGEPINPAIRKSEDKVVDSVLVAELAKPLTAYCRCWRSGTFPLCDGSHVKHNKATGDNVGPLLL
        MAS  ATS+L    PP  N   GG+  RR+VVVRAEGGE INPAIRKSEDKVVDSV+VA+LAKPLT YCRCWRS TFPLCDGSHVKHNKATGDNVGPLLL
Subjt:  MASTVATSSLSIIHPPRRNVNGGGL--RRLVVVRAEGGEPINPAIRKSEDKVVDSVLVAELAKPLTAYCRCWRSGTFPLCDGSHVKHNKATGDNVGPLLL

Query:  KKQ
        KKQ
Subjt:  KKQ

XP_023534172.1 CDGSH iron-sulfur domain-containing protein NEET [Cucurbita pepo subsp. pepo]3.7e-3779.61Show/hide
Query:  MASTVATSSLSIIHPPRRNVNGGGL--RRLVVVRAEGGEPINPAIRKSEDKVVDSVLVAELAKPLTAYCRCWRSGTFPLCDGSHVKHNKATGDNVGPLLL
        MAS  ATS+L    PP  N   GG+  RR+VVVRAEGGE INPAIRKSEDKVVDSV+VA+LAKPLT YCRCWRS TFPLCDGSHVKHNKATGDNVGPLLL
Subjt:  MASTVATSSLSIIHPPRRNVNGGGL--RRLVVVRAEGGEPINPAIRKSEDKVVDSVLVAELAKPLTAYCRCWRSGTFPLCDGSHVKHNKATGDNVGPLLL

Query:  KKQ
        KKQ
Subjt:  KKQ

TrEMBL top hitse value%identityAlignment
A0A0A0KL88 ZnF_CDGSH domain-containing protein2.1e-3380.61Show/hide
Query:  TSSLSI-IHPPRRNVNGGGLRRLVVVRAEG---GEPINPAIRKSEDKVVDSVLVAELAKPLTAYCRCWRSGTFPLCDGSHVKHNKATGDNVGPLLLKK
        +SSLS   H   RN N  G RR VVVRAEG   GE INPAIRKSEDKVVDSVLV EL+KPLT YCRCWRSGTFPLCDGSHVKHNKATGDNVGPLLLKK
Subjt:  TSSLSI-IHPPRRNVNGGGLRRLVVVRAEG---GEPINPAIRKSEDKVVDSVLVAELAKPLTAYCRCWRSGTFPLCDGSHVKHNKATGDNVGPLLLKK

A0A5A7UKN7 CDGSH iron-sulfur domain-containing protein NEET2.1e-3375Show/hide
Query:  MASTVATSSLSIIHPPR------RNVNGGGLRRLVVVRAEG--GEPINPAIRKSEDKVVDSVLVAELAKPLTAYCRCWRSGTFPLCDGSHVKHNKATGDN
        MAS VA SS S     R      R+ N  G RR VVVRAEG  GE INPAIRKSE+KVVDSVL+AEL+KPLT YCRCWRSGTFPLCDGSHVKHNKATGDN
Subjt:  MASTVATSSLSIIHPPR------RNVNGGGLRRLVVVRAEG--GEPINPAIRKSEDKVVDSVLVAELAKPLTAYCRCWRSGTFPLCDGSHVKHNKATGDN

Query:  VGPLLLKK
        VGPLLLKK
Subjt:  VGPLLLKK

A0A6J1E4B9 CDGSH iron-sulfur domain-containing protein NEET2.9e-3572.57Show/hide
Query:  MASTVAT-----SSLSIIHPPRRNV------NGGGLRRLVVVRAE-GGEPINPAIRKSEDKVVDSVLVAELAKPLTAYCRCWRSGTFPLCDGSHVKHNKA
        MAS + T     +S+S  H   RN+       GGG RRL VVRAE G EPINPAIRKSEDKVVDSVL+++LAKPLTAYCRCWRS TFPLCDGSHVKHNKA
Subjt:  MASTVAT-----SSLSIIHPPRRNV------NGGGLRRLVVVRAE-GGEPINPAIRKSEDKVVDSVLVAELAKPLTAYCRCWRSGTFPLCDGSHVKHNKA

Query:  TGDNVGPLLLKKQ
        TGDNVGPLLLKKQ
Subjt:  TGDNVGPLLLKKQ

A0A6J1H2X5 CDGSH iron-sulfur domain-containing protein NEET2.0e-3676.92Show/hide
Query:  MASTVATSSLSIIHPPRRNVNGGGL---RRLVVVRAEGGEPINPAIRKSEDKVVDSVLVAELAKPLTAYCRCWRSGTFPLCDGSHVKHNKATGDNVGPLL
        MAS  ATS+L    PP  N   GG+   R +VVVRAEGG+ INPAIRKSEDKVVDSV+VA+LAKPLT YCRCWRS TFPLCDGSHVKHNKATGDNVGPLL
Subjt:  MASTVATSSLSIIHPPRRNVNGGGL---RRLVVVRAEGGEPINPAIRKSEDKVVDSVLVAELAKPLTAYCRCWRSGTFPLCDGSHVKHNKATGDNVGPLL

Query:  LKKQ
        LKKQ
Subjt:  LKKQ

A0A6J1K1P5 CDGSH iron-sulfur domain-containing protein NEET6.2e-3879.61Show/hide
Query:  MASTVATSSLSIIHPPRRNVNGGGL--RRLVVVRAEGGEPINPAIRKSEDKVVDSVLVAELAKPLTAYCRCWRSGTFPLCDGSHVKHNKATGDNVGPLLL
        MAS  ATS+L    PP  N   GG+  RR+VVVRAEGGE INPAIRKSEDKVVDSV+VA+LAKPLT YCRCWRS TFPLCDGSHVKHNKATGDNVGPLLL
Subjt:  MASTVATSSLSIIHPPRRNVNGGGL--RRLVVVRAEGGEPINPAIRKSEDKVVDSVLVAELAKPLTAYCRCWRSGTFPLCDGSHVKHNKATGDNVGPLLL

Query:  KKQ
        KKQ
Subjt:  KKQ

SwissProt top hitse value%identityAlignment
Q05B71 CDGSH iron-sulfur domain-containing protein 25.8e-1760.32Show/hide
Query:  INPAIRKSEDKVVDSVLVAELAKPLTAYCRCWRSGTFPLCDGSHVKHNKATGDNVGPLLLKKQ
        IN  I+K   KVV+ + + +L     AYCRCWRS TFP CDGSH KHN+ TGDNVGPL+LKK+
Subjt:  INPAIRKSEDKVVDSVLVAELAKPLTAYCRCWRSGTFPLCDGSHVKHNKATGDNVGPLLLKKQ

Q6AZG1 CDGSH iron-sulfur domain-containing protein 2B5.8e-1760.32Show/hide
Query:  INPAIRKSEDKVVDSVLVAELAKPLTAYCRCWRSGTFPLCDGSHVKHNKATGDNVGPLLLKKQ
        IN  I+K   KVV+ + + +L     AYCRCWRS TFP+CDGSH KHN+ TGDNVGPL+LKK+
Subjt:  INPAIRKSEDKVVDSVLVAELAKPLTAYCRCWRSGTFPLCDGSHVKHNKATGDNVGPLLLKKQ

Q6PCF8 CDGSH iron-sulfur domain-containing protein 2A5.8e-1760.32Show/hide
Query:  INPAIRKSEDKVVDSVLVAELAKPLTAYCRCWRSGTFPLCDGSHVKHNKATGDNVGPLLLKKQ
        IN  I+K   KVV+ + + +L     AYCRCWRS TFP+CDGSH KHN+ TGDNVGPL+LKK+
Subjt:  INPAIRKSEDKVVDSVLVAELAKPLTAYCRCWRSGTFPLCDGSHVKHNKATGDNVGPLLLKKQ

Q7T326 CDGSH iron-sulfur domain-containing protein 23.4e-1758.73Show/hide
Query:  INPAIRKSEDKVVDSVLVAELAKPLTAYCRCWRSGTFPLCDGSHVKHNKATGDNVGPLLLKKQ
        IN  I+K   KVV+ + + +L  P   YCRCWRS TFP+CD SH+KHN+ TGDNVGPL+LKK+
Subjt:  INPAIRKSEDKVVDSVLVAELAKPLTAYCRCWRSGTFPLCDGSHVKHNKATGDNVGPLLLKKQ

Q9FLI7 CDGSH iron-sulfur domain-containing protein NEET1.3e-3267.62Show/hide
Query:  MASTVATSSLSIIHPPRRNVNGGGL----RRLVVVRAEGGEPINPAIRKSEDKVVDSVLVAELAKPLTAYCRCWRSGTFPLCDGSHVKHNKATGDNVGPL
        +AST  T        P + V GG +    +R+VVVRAEGG  INP IRK+EDKVVDSV+V EL+K +T YCRCWRSGTFPLCDGSHVKHNKA GDNVGPL
Subjt:  MASTVATSSLSIIHPPRRNVNGGGL----RRLVVVRAEGGEPINPAIRKSEDKVVDSVLVAELAKPLTAYCRCWRSGTFPLCDGSHVKHNKATGDNVGPL

Query:  LLKKQ
        LLKKQ
Subjt:  LLKKQ

Arabidopsis top hitse value%identityAlignment
AT5G51720.1 2 iron, 2 sulfur cluster binding9.1e-3467.62Show/hide
Query:  MASTVATSSLSIIHPPRRNVNGGGL----RRLVVVRAEGGEPINPAIRKSEDKVVDSVLVAELAKPLTAYCRCWRSGTFPLCDGSHVKHNKATGDNVGPL
        +AST  T        P + V GG +    +R+VVVRAEGG  INP IRK+EDKVVDSV+V EL+K +T YCRCWRSGTFPLCDGSHVKHNKA GDNVGPL
Subjt:  MASTVATSSLSIIHPPRRNVNGGGL----RRLVVVRAEGGEPINPAIRKSEDKVVDSVLVAELAKPLTAYCRCWRSGTFPLCDGSHVKHNKATGDNVGPL

Query:  LLKKQ
        LLKKQ
Subjt:  LLKKQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGTCCACTGTGGCCACTTCTTCCTTATCAATAATCCATCCTCCTCGTCGCAACGTCAACGGCGGCGGACTGCGGCGACTGGTGGTGGTCAGAGCTGAAGGCGGCGA
ACCCATAAACCCTGCAATCAGGAAGAGCGAAGACAAAGTGGTGGACTCTGTGCTTGTCGCTGAACTGGCCAAGCCCCTCACTGCTTATTGCAGATGTTGGAGGTCAGGCA
CATTTCCTCTGTGTGATGGAAGCCATGTGAAGCACAACAAGGCCACTGGAGATAATGTTGGTCCTTTGCTCTTAAAGAAGCAGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCGTCCACTGTGGCCACTTCTTCCTTATCAATAATCCATCCTCCTCGTCGCAACGTCAACGGCGGCGGACTGCGGCGACTGGTGGTGGTCAGAGCTGAAGGCGGCGA
ACCCATAAACCCTGCAATCAGGAAGAGCGAAGACAAAGTGGTGGACTCTGTGCTTGTCGCTGAACTGGCCAAGCCCCTCACTGCTTATTGCAGATGTTGGAGGTCAGGCA
CATTTCCTCTGTGTGATGGAAGCCATGTGAAGCACAACAAGGCCACTGGAGATAATGTTGGTCCTTTGCTCTTAAAGAAGCAGTAG
Protein sequenceShow/hide protein sequence
MASTVATSSLSIIHPPRRNVNGGGLRRLVVVRAEGGEPINPAIRKSEDKVVDSVLVAELAKPLTAYCRCWRSGTFPLCDGSHVKHNKATGDNVGPLLLKKQ