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Lag0032207 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0032207
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionReverse transcriptase, RNA-dependent DNA polymerase
Genome locationchr11:27321700..27322104
RNA-Seq ExpressionLag0032207
SyntenyLag0032207
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_016902197.1 PREDICTED: uncharacterized protein LOC107991581 isoform X1 [Cucumis melo]4.3e-1745.74Show/hide
Query:  MTNPSSTTATSSVATGAGNFSSPPLNQLLNQITSIKLNRGNYLLRKNLAMPILWSYKLEGHLLGTTECPPMFIQRANESANPSAITIVEATRASSSETAV
        M N   T A  S++  +  FS+PPLNQ+LNQ+T++KL+R NYLL K LA+PIL  YKLEGHL   T CP  F+     SA+ S  T+ E         A 
Subjt:  MTNPSSTTATSSVATGAGNFSSPPLNQLLNQITSIKLNRGNYLLRKNLAMPILWSYKLEGHLLGTTECPPMFIQRANESANPSAITIVEATRASSSETAV

Query:  SGVSSSESRAVINPQYDAWVAVDQLPLGW
         G SSS +  ++NP ++ WV  D L LGW
Subjt:  SGVSSSESRAVINPQYDAWVAVDQLPLGW

XP_016902203.1 PREDICTED: uncharacterized protein LOC107991581 isoform X3 [Cucumis melo]4.3e-1745.74Show/hide
Query:  MTNPSSTTATSSVATGAGNFSSPPLNQLLNQITSIKLNRGNYLLRKNLAMPILWSYKLEGHLLGTTECPPMFIQRANESANPSAITIVEATRASSSETAV
        M N   T A  S++  +  FS+PPLNQ+LNQ+T++KL+R NYLL K LA+PIL  YKLEGHL   T CP  F+     SA+ S  T+ E         A 
Subjt:  MTNPSSTTATSSVATGAGNFSSPPLNQLLNQITSIKLNRGNYLLRKNLAMPILWSYKLEGHLLGTTECPPMFIQRANESANPSAITIVEATRASSSETAV

Query:  SGVSSSESRAVINPQYDAWVAVDQLPLGW
         G SSS +  ++NP ++ WV  D L LGW
Subjt:  SGVSSSESRAVINPQYDAWVAVDQLPLGW

XP_016902204.1 PREDICTED: uncharacterized protein LOC107991581 isoform X4 [Cucumis melo]4.3e-1745.74Show/hide
Query:  MTNPSSTTATSSVATGAGNFSSPPLNQLLNQITSIKLNRGNYLLRKNLAMPILWSYKLEGHLLGTTECPPMFIQRANESANPSAITIVEATRASSSETAV
        M N   T A  S++  +  FS+PPLNQ+LNQ+T++KL+R NYLL K LA+PIL  YKLEGHL   T CP  F+     SA+ S  T+ E         A 
Subjt:  MTNPSSTTATSSVATGAGNFSSPPLNQLLNQITSIKLNRGNYLLRKNLAMPILWSYKLEGHLLGTTECPPMFIQRANESANPSAITIVEATRASSSETAV

Query:  SGVSSSESRAVINPQYDAWVAVDQLPLGW
         G SSS +  ++NP ++ WV  D L LGW
Subjt:  SGVSSSESRAVINPQYDAWVAVDQLPLGW

XP_016902205.1 PREDICTED: uncharacterized protein LOC107991581 isoform X5 [Cucumis melo]4.3e-1745.74Show/hide
Query:  MTNPSSTTATSSVATGAGNFSSPPLNQLLNQITSIKLNRGNYLLRKNLAMPILWSYKLEGHLLGTTECPPMFIQRANESANPSAITIVEATRASSSETAV
        M N   T A  S++  +  FS+PPLNQ+LNQ+T++KL+R NYLL K LA+PIL  YKLEGHL   T CP  F+     SA+ S  T+ E         A 
Subjt:  MTNPSSTTATSSVATGAGNFSSPPLNQLLNQITSIKLNRGNYLLRKNLAMPILWSYKLEGHLLGTTECPPMFIQRANESANPSAITIVEATRASSSETAV

Query:  SGVSSSESRAVINPQYDAWVAVDQLPLGW
         G SSS +  ++NP ++ WV  D L LGW
Subjt:  SGVSSSESRAVINPQYDAWVAVDQLPLGW

XP_038882253.1 uncharacterized protein LOC120073479 [Benincasa hispida]6.7e-1850Show/hide
Query:  FSSPPLNQLLNQITSIKLNRGNYLLRKNLAMPILWSYKLEGHLLGTTECPPMFIQRANESANPSAITIVEATRASSSETAVSGVSSSESRAVINPQYDAW
        FS+PPLNQLLNQITSIKL RG ++L K L++PIL  Y+LEGHL  T  CP MFI   +  A P  +             A  G  SS     +NPQY+AW
Subjt:  FSSPPLNQLLNQITSIKLNRGNYLLRKNLAMPILWSYKLEGHLLGTTECPPMFIQRANESANPSAITIVEATRASSSETAVSGVSSSESRAVINPQYDAW

Query:  VAVDQLPLGW
        V  +QL LGW
Subjt:  VAVDQLPLGW

TrEMBL top hitse value%identityAlignment
A0A1S4E1U6 uncharacterized protein LOC107991581 isoform X12.1e-1745.74Show/hide
Query:  MTNPSSTTATSSVATGAGNFSSPPLNQLLNQITSIKLNRGNYLLRKNLAMPILWSYKLEGHLLGTTECPPMFIQRANESANPSAITIVEATRASSSETAV
        M N   T A  S++  +  FS+PPLNQ+LNQ+T++KL+R NYLL K LA+PIL  YKLEGHL   T CP  F+     SA+ S  T+ E         A 
Subjt:  MTNPSSTTATSSVATGAGNFSSPPLNQLLNQITSIKLNRGNYLLRKNLAMPILWSYKLEGHLLGTTECPPMFIQRANESANPSAITIVEATRASSSETAV

Query:  SGVSSSESRAVINPQYDAWVAVDQLPLGW
         G SSS +  ++NP ++ WV  D L LGW
Subjt:  SGVSSSESRAVINPQYDAWVAVDQLPLGW

A0A1S4E1U9 uncharacterized protein LOC107991581 isoform X42.1e-1745.74Show/hide
Query:  MTNPSSTTATSSVATGAGNFSSPPLNQLLNQITSIKLNRGNYLLRKNLAMPILWSYKLEGHLLGTTECPPMFIQRANESANPSAITIVEATRASSSETAV
        M N   T A  S++  +  FS+PPLNQ+LNQ+T++KL+R NYLL K LA+PIL  YKLEGHL   T CP  F+     SA+ S  T+ E         A 
Subjt:  MTNPSSTTATSSVATGAGNFSSPPLNQLLNQITSIKLNRGNYLLRKNLAMPILWSYKLEGHLLGTTECPPMFIQRANESANPSAITIVEATRASSSETAV

Query:  SGVSSSESRAVINPQYDAWVAVDQLPLGW
         G SSS +  ++NP ++ WV  D L LGW
Subjt:  SGVSSSESRAVINPQYDAWVAVDQLPLGW

A0A1S4E1V2 uncharacterized protein LOC107991581 isoform X32.1e-1745.74Show/hide
Query:  MTNPSSTTATSSVATGAGNFSSPPLNQLLNQITSIKLNRGNYLLRKNLAMPILWSYKLEGHLLGTTECPPMFIQRANESANPSAITIVEATRASSSETAV
        M N   T A  S++  +  FS+PPLNQ+LNQ+T++KL+R NYLL K LA+PIL  YKLEGHL   T CP  F+     SA+ S  T+ E         A 
Subjt:  MTNPSSTTATSSVATGAGNFSSPPLNQLLNQITSIKLNRGNYLLRKNLAMPILWSYKLEGHLLGTTECPPMFIQRANESANPSAITIVEATRASSSETAV

Query:  SGVSSSESRAVINPQYDAWVAVDQLPLGW
         G SSS +  ++NP ++ WV  D L LGW
Subjt:  SGVSSSESRAVINPQYDAWVAVDQLPLGW

A0A1S4E2K3 uncharacterized protein LOC107991581 isoform X52.1e-1745.74Show/hide
Query:  MTNPSSTTATSSVATGAGNFSSPPLNQLLNQITSIKLNRGNYLLRKNLAMPILWSYKLEGHLLGTTECPPMFIQRANESANPSAITIVEATRASSSETAV
        M N   T A  S++  +  FS+PPLNQ+LNQ+T++KL+R NYLL K LA+PIL  YKLEGHL   T CP  F+     SA+ S  T+ E         A 
Subjt:  MTNPSSTTATSSVATGAGNFSSPPLNQLLNQITSIKLNRGNYLLRKNLAMPILWSYKLEGHLLGTTECPPMFIQRANESANPSAITIVEATRASSSETAV

Query:  SGVSSSESRAVINPQYDAWVAVDQLPLGW
         G SSS +  ++NP ++ WV  D L LGW
Subjt:  SGVSSSESRAVINPQYDAWVAVDQLPLGW

A0A5D3BVJ1 Uncharacterized protein2.7e-1746.28Show/hide
Query:  ATSSVATGAGNFSSPPLNQLLNQITSIKLNRGNYLLRKNLAMPILWSYKLEGHLLGTTECPPMFIQRANESANPSAITIVEATRASSSETAVSGVSSSES
        A S V     NFS+PPLNQLLNQ++S+KL+RGNYLL K LA+PI+ SYK EGHL G   CPP FI      +        EAT  +SS         S +
Subjt:  ATSSVATGAGNFSSPPLNQLLNQITSIKLNRGNYLLRKNLAMPILWSYKLEGHLLGTTECPPMFIQRANESANPSAITIVEATRASSSETAVSGVSSSES

Query:  RAVINPQYDAWVAVDQLPLGW
           +NP++D W+    L LGW
Subjt:  RAVINPQYDAWVAVDQLPLGW

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACAAACCCCTCTTCAACCACTGCAACTTCATCTGTCGCTACCGGAGCTGGAAATTTCAGCAGCCCTCCTCTTAACCAGCTGCTGAATCAAATCACCTCTATCAAGCT
AAATCGAGGTAACTATCTTCTCCGGAAGAATCTTGCAATGCCAATCCTCTGGAGCTACAAACTTGAGGGACACCTCTTGGGCACGACAGAATGCCCTCCTATGTTCATTC
AACGAGCCAATGAATCAGCTAATCCGTCCGCAATCACTATAGTGGAAGCAACTAGAGCATCGAGCTCAGAAACAGCAGTTAGCGGAGTCTCCTCCTCCGAATCAAGAGCT
GTCATAAATCCCCAATATGATGCTTGGGTAGCAGTCGATCAATTGCCACTTGGATGGTGTTGCTTTTTGGAGTAG
mRNA sequenceShow/hide mRNA sequence
ATGACAAACCCCTCTTCAACCACTGCAACTTCATCTGTCGCTACCGGAGCTGGAAATTTCAGCAGCCCTCCTCTTAACCAGCTGCTGAATCAAATCACCTCTATCAAGCT
AAATCGAGGTAACTATCTTCTCCGGAAGAATCTTGCAATGCCAATCCTCTGGAGCTACAAACTTGAGGGACACCTCTTGGGCACGACAGAATGCCCTCCTATGTTCATTC
AACGAGCCAATGAATCAGCTAATCCGTCCGCAATCACTATAGTGGAAGCAACTAGAGCATCGAGCTCAGAAACAGCAGTTAGCGGAGTCTCCTCCTCCGAATCAAGAGCT
GTCATAAATCCCCAATATGATGCTTGGGTAGCAGTCGATCAATTGCCACTTGGATGGTGTTGCTTTTTGGAGTAG
Protein sequenceShow/hide protein sequence
MTNPSSTTATSSVATGAGNFSSPPLNQLLNQITSIKLNRGNYLLRKNLAMPILWSYKLEGHLLGTTECPPMFIQRANESANPSAITIVEATRASSSETAVSGVSSSESRA
VINPQYDAWVAVDQLPLGWCCFLE