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Lag0032212 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0032212
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionReverse transcriptase, RNA-dependent DNA polymerase
Genome locationchr11:27381857..27382384
RNA-Seq ExpressionLag0032212
SyntenyLag0032212
Gene Ontology termsGO:0044237 - cellular metabolic process (biological process)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0066132.1 putative leucine-rich repeat receptor-like protein kinase [Cucumis melo var. makuwa]6.5e-2947.02Show/hide
Query:  MTSVNSTGSSAAVTGPANFSSPPLNQLLNQITSIKLDRGNFLLWKNLALPILRSYKLDGHLSGEKSYPPKMIQVVPAAVATQSTA------SATSPEVVV
        M +      S   T   +F++PPLNQ+LNQ+T+IKLDR N+LLWK LALPIL+ YKL+GHL+GEK  P K + +  +A +  S           +P+ + 
Subjt:  MTSVNSTGSSAAVTGPANFSSPPLNQLLNQITSIKLDRGNFLLWKNLALPILRSYKLDGHLSGEKSYPPKMIQVVPAAVATQSTA------SATSPEVVV

Query:  ASEASGASVEEINPLYESWVAVDQLLLGWLYNSMTPEIATQVMGFESAQGL
        +S  S  ++  INPL+E W+  D LLLGWLYNSMTP++A Q+MGF +A+ L
Subjt:  ASEASGASVEEINPLYESWVAVDQLLLGWLYNSMTPEIATQVMGFESAQGL

XP_016900937.1 PREDICTED: uncharacterized protein LOC107991116 [Cucumis melo]8.4e-2944.51Show/hide
Query:  NSTGSSAAVTGPANFSSPPLNQLLNQITSIKLDRGNFLLWKNLALPILRSYKLDGHLSGEKSYPPKMIQVVPAAVATQSTASATSPEVVVASEASGAS--
        N+   S   T   +F++P LNQ+LNQ+T+IKLDRGN+LLWK LALPIL+SYKL+ HL GE    PK+I      + TQ   S        + E S +S  
Subjt:  NSTGSSAAVTGPANFSSPPLNQLLNQITSIKLDRGNFLLWKNLALPILRSYKLDGHLSGEKSYPPKMIQVVPAAVATQSTASATSPEVVVASEASGAS--

Query:  VEEINPLYESWVAVDQLLLGWLYNSMTPEIATQVMGFESAQGLWALCRSYLVYSLEQKKITFGKCFNNVGKAV
        V  +NP YE W+  D LLLGWLYNSMTPE+  Q+MGF +A+ LW   +         K+    + F    K V
Subjt:  VEEINPLYESWVAVDQLLLGWLYNSMTPEIATQVMGFESAQGLWALCRSYLVYSLEQKKITFGKCFNNVGKAV

XP_022151683.1 uncharacterized protein LOC111019598 [Momordica charantia]2.6e-3055.8Show/hide
Query:  AVTGPANFSSPPLNQLLNQITSIKLDRGNFLLWKNLALPILRSYKLDGHLSGEKSYPPKMIQVVPAAVATQ---STASATSPEVVVASEASGASVEEINP
        AV   A F+SPPLNQLLNQITSIK+DRGNFLLW+NLALPILRSYKL  +L+G+K  PP    +VP    T    ST+S +SP               +NP
Subjt:  AVTGPANFSSPPLNQLLNQITSIKLDRGNFLLWKNLALPILRSYKLDGHLSGEKSYPPKMIQVVPAAVATQ---STASATSPEVVVASEASGASVEEINP

Query:  LYESWVAVDQLLLGWLYNSMTPEIATQVMGFESAQGLW
         YE+W+ VD+LLLGWLYNSM  ++A QVMGF +++ LW
Subjt:  LYESWVAVDQLLLGWLYNSMTPEIATQVMGFESAQGLW

XP_031745012.1 uncharacterized protein LOC116405217 [Cucumis sativus]2.9e-2948.94Show/hide
Query:  STGSSAAVTGPANFSSPPLNQLLNQITSIKLDRGNFLLWKNLALPILRSYKLDGHLSGEKSYPPKMIQVVPAAVATQSTASATSPEVVVASEASGASVEE
        + G S   +   NFS+PPLNQ+LNQ+ S+KLDRGN+LLW+ LALPIL+SYKL GHL+ E   PPK I       +++ST + T                 
Subjt:  STGSSAAVTGPANFSSPPLNQLLNQITSIKLDRGNFLLWKNLALPILRSYKLDGHLSGEKSYPPKMIQVVPAAVATQSTASATSPEVVVASEASGASVEE

Query:  INPLYESWVAVDQLLLGWLYNSMTPEIATQVMGFESAQGLW
        +NP ++ WV  D LLLGW+YNSMTPE+A Q+MGF +A+ LW
Subjt:  INPLYESWVAVDQLLLGWLYNSMTPEIATQVMGFESAQGLW

XP_038882253.1 uncharacterized protein LOC120073479 [Benincasa hispida]3.8e-2952.52Show/hide
Query:  AVTGPANFSSPPLNQLLNQITSIKLDRGNFLLWKNLALPILRSYKLDGHLSGEKSYPPKMIQVVPAAVATQSTASATSPEVVVASEASGA----SVEEIN
        A T P  FS+PPLNQLLNQITSIKL+RG F+LWK L+LPIL+ Y+L+GHLS  K  P   I          ST+S   P  V +  + GA     ++ +N
Subjt:  AVTGPANFSSPPLNQLLNQITSIKLDRGNFLLWKNLALPILRSYKLDGHLSGEKSYPPKMIQVVPAAVATQSTASATSPEVVVASEASGA----SVEEIN

Query:  PLYESWVAVDQLLLGWLYNSMTPEIATQVMGFESAQGLW
        P YE+WV  +QLLLGWLYNSMT E+  Q+MG++SA+ LW
Subjt:  PLYESWVAVDQLLLGWLYNSMTPEIATQVMGFESAQGLW

TrEMBL top hitse value%identityAlignment
A0A1S4DY80 uncharacterized protein LOC1079911164.1e-2944.51Show/hide
Query:  NSTGSSAAVTGPANFSSPPLNQLLNQITSIKLDRGNFLLWKNLALPILRSYKLDGHLSGEKSYPPKMIQVVPAAVATQSTASATSPEVVVASEASGAS--
        N+   S   T   +F++P LNQ+LNQ+T+IKLDRGN+LLWK LALPIL+SYKL+ HL GE    PK+I      + TQ   S        + E S +S  
Subjt:  NSTGSSAAVTGPANFSSPPLNQLLNQITSIKLDRGNFLLWKNLALPILRSYKLDGHLSGEKSYPPKMIQVVPAAVATQSTASATSPEVVVASEASGAS--

Query:  VEEINPLYESWVAVDQLLLGWLYNSMTPEIATQVMGFESAQGLWALCRSYLVYSLEQKKITFGKCFNNVGKAV
        V  +NP YE W+  D LLLGWLYNSMTPE+  Q+MGF +A+ LW   +         K+    + F    K V
Subjt:  VEEINPLYESWVAVDQLLLGWLYNSMTPEIATQVMGFESAQGLWALCRSYLVYSLEQKKITFGKCFNNVGKAV

A0A5A7VCS1 Putative leucine-rich repeat receptor-like protein kinase3.1e-2947.02Show/hide
Query:  MTSVNSTGSSAAVTGPANFSSPPLNQLLNQITSIKLDRGNFLLWKNLALPILRSYKLDGHLSGEKSYPPKMIQVVPAAVATQSTA------SATSPEVVV
        M +      S   T   +F++PPLNQ+LNQ+T+IKLDR N+LLWK LALPIL+ YKL+GHL+GEK  P K + +  +A +  S           +P+ + 
Subjt:  MTSVNSTGSSAAVTGPANFSSPPLNQLLNQITSIKLDRGNFLLWKNLALPILRSYKLDGHLSGEKSYPPKMIQVVPAAVATQSTA------SATSPEVVV

Query:  ASEASGASVEEINPLYESWVAVDQLLLGWLYNSMTPEIATQVMGFESAQGL
        +S  S  ++  INPL+E W+  D LLLGWLYNSMTP++A Q+MGF +A+ L
Subjt:  ASEASGASVEEINPLYESWVAVDQLLLGWLYNSMTPEIATQVMGFESAQGL

A0A5A7VPY0 Uncharacterized protein1.6e-2850.69Show/hide
Query:  NSTGSSAAVTGPANFSSPPLNQLLNQITSIKLDRGNFLLWKNLALPILRSYKLDGHLSGEKSYPPKMIQVVPAAVATQSTASATSPEVVVASEASGAS--
        N+   S   T   +F++P LNQ+LNQ+T+IKLDRGN+LLWK LALPIL+SYKL+ HL GE    PK+I      + TQ   S        + E S +S  
Subjt:  NSTGSSAAVTGPANFSSPPLNQLLNQITSIKLDRGNFLLWKNLALPILRSYKLDGHLSGEKSYPPKMIQVVPAAVATQSTASATSPEVVVASEASGAS--

Query:  VEEINPLYESWVAVDQLLLGWLYNSMTPEIATQVMGFESAQGLW
        V  +NP YE W+  D LLLGWLYNSMTPE+  Q+MGF +A+ LW
Subjt:  VEEINPLYESWVAVDQLLLGWLYNSMTPEIATQVMGFESAQGLW

A0A5D3BVJ1 Uncharacterized protein2.0e-2850.38Show/hide
Query:  NFSSPPLNQLLNQITSIKLDRGNFLLWKNLALPILRSYKLDGHLSGEKSYPPKMI--QVVPAAVATQSTASATSPEVVVASEASGASVEEINPLYESWVA
        NFS+PPLNQLLNQ++S+KLDRGN+LLWK LALPI++SYK +GHL+GE   PPK I  Q+  +      TA AT       + +   + + +NP ++ W+ 
Subjt:  NFSSPPLNQLLNQITSIKLDRGNFLLWKNLALPILRSYKLDGHLSGEKSYPPKMI--QVVPAAVATQSTASATSPEVVVASEASGASVEEINPLYESWVA

Query:  VDQLLLGWLYNSMTPEIATQVMGFESAQGLW
           LLLGW+YNSMT E+A Q+ GF +A+ LW
Subjt:  VDQLLLGWLYNSMTPEIATQVMGFESAQGLW

A0A6J1DCW4 uncharacterized protein LOC1110195981.3e-3055.8Show/hide
Query:  AVTGPANFSSPPLNQLLNQITSIKLDRGNFLLWKNLALPILRSYKLDGHLSGEKSYPPKMIQVVPAAVATQ---STASATSPEVVVASEASGASVEEINP
        AV   A F+SPPLNQLLNQITSIK+DRGNFLLW+NLALPILRSYKL  +L+G+K  PP    +VP    T    ST+S +SP               +NP
Subjt:  AVTGPANFSSPPLNQLLNQITSIKLDRGNFLLWKNLALPILRSYKLDGHLSGEKSYPPKMIQVVPAAVATQ---STASATSPEVVVASEASGASVEEINP

Query:  LYESWVAVDQLLLGWLYNSMTPEIATQVMGFESAQGLW
         YE+W+ VD+LLLGWLYNSM  ++A QVMGF +++ LW
Subjt:  LYESWVAVDQLLLGWLYNSMTPEIATQVMGFESAQGLW

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACTAGCGTCAACTCCACCGGATCTTCCGCTGCAGTCACCGGACCTGCCAATTTCAGCAGTCCTCCGTTAAATCAATTGTTGAATCAGATAACCTCAATTAAGCTGGA
TCGAGGTAATTTCCTTCTATGGAAAAATTTAGCGTTGCCAATTTTACGTAGCTATAAGCTAGATGGTCACCTGTCCGGAGAGAAATCCTATCCTCCGAAGATGATTCAGG
TTGTCCCAGCTGCGGTTGCTACTCAATCGACAGCAAGTGCAACGAGTCCAGAAGTCGTTGTTGCCAGTGAGGCTTCTGGTGCAAGTGTTGAAGAAATCAACCCTCTGTAT
GAGTCGTGGGTTGCTGTGGATCAGTTACTGTTAGGTTGGCTATATAACTCTATGACCCCTGAAATAGCCACTCAGGTCATGGGGTTTGAGAGTGCTCAGGGATTGTGGGC
GCTGTGCAGGAGTTATTTGGTGTACAGTCTAGAGCAGAAGAAGATTACCTTCGGCAAGTGTTTCAACAATGTAGGAAAGGCAGTATGA
mRNA sequenceShow/hide mRNA sequence
ATGACTAGCGTCAACTCCACCGGATCTTCCGCTGCAGTCACCGGACCTGCCAATTTCAGCAGTCCTCCGTTAAATCAATTGTTGAATCAGATAACCTCAATTAAGCTGGA
TCGAGGTAATTTCCTTCTATGGAAAAATTTAGCGTTGCCAATTTTACGTAGCTATAAGCTAGATGGTCACCTGTCCGGAGAGAAATCCTATCCTCCGAAGATGATTCAGG
TTGTCCCAGCTGCGGTTGCTACTCAATCGACAGCAAGTGCAACGAGTCCAGAAGTCGTTGTTGCCAGTGAGGCTTCTGGTGCAAGTGTTGAAGAAATCAACCCTCTGTAT
GAGTCGTGGGTTGCTGTGGATCAGTTACTGTTAGGTTGGCTATATAACTCTATGACCCCTGAAATAGCCACTCAGGTCATGGGGTTTGAGAGTGCTCAGGGATTGTGGGC
GCTGTGCAGGAGTTATTTGGTGTACAGTCTAGAGCAGAAGAAGATTACCTTCGGCAAGTGTTTCAACAATGTAGGAAAGGCAGTATGA
Protein sequenceShow/hide protein sequence
MTSVNSTGSSAAVTGPANFSSPPLNQLLNQITSIKLDRGNFLLWKNLALPILRSYKLDGHLSGEKSYPPKMIQVVPAAVATQSTASATSPEVVVASEASGASVEEINPLY
ESWVAVDQLLLGWLYNSMTPEIATQVMGFESAQGLWALCRSYLVYSLEQKKITFGKCFNNVGKAV