; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0032222 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0032222
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationchr11:27658887..27660731
RNA-Seq ExpressionLag0032222
SyntenyLag0032222
Gene Ontology termsGO:0003824 - catalytic activity (molecular function)
InterPro domainsIPR036691 - Endonuclease/exonuclease/phosphatase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA3453480.1 reverse transcriptase [Gossypium australe]1.1e-2232.44Show/hide
Query:  GFSNIISVGSSGNSRGLMLLWQSHLNISMNSFSKGHIDVTIKE--LDWWWNFTGFYGNPDQNRIKRSCSLLERLHGSCKLPLVIGGDFHE----------
        GF+N I+V + G+  GL L W+  + +++ S+SK HIDV IKE  +   W FTGFYG+P     K   +LLERL      P ++ GDF+E          
Subjt:  GFSNIISVGSSGNSRGLMLLWQSHLNISMNSFSKGHIDVTIKE--LDWWWNFTGFYGNPDQNRIKRSCSLLERLHGSCKLPLVIGGDFHE----------

Query:  -----------------CDLIDVGFSRDRYTWARNKNNKEATREHLDRFLTNDKMWSKAKDMKVEHLNFHHSDHRPILLKIGWTNSYQQAIFSKKKIKME
                         C L+DVGFS   +TW R   ++   RE LDR + N+K  +     +++HL F  SDH P+LL    T      I   ++   E
Subjt:  -----------------CDLIDVGFSRDRYTWARNKNNKEATREHLDRFLTNDKMWSKAKDMKVEHLNFHHSDHRPILLKIGWTNSYQQAIFSKKKIKME

Query:  EFWPDLEGSKNAFKYAWLSSSEASNINFSKKKNQEGLAEMSKWNKNRLKGSIQGAIKRKEKE
         +W   E  +   +  W SSSE   +    K  Q GL + +K  K +     +G +K+K  E
Subjt:  EFWPDLEGSKNAFKYAWLSSSEASNINFSKKKNQEGLAEMSKWNKNRLKGSIQGAIKRKEKE

TXG57064.1 hypothetical protein EZV62_018377 [Acer yangbiense]2.9e-2330.34Show/hide
Query:  MGFSNIISVGSSGNSRGLMLLWQSHLNISMNSFSKGHIDVTI-KELDWWWNFTGFYGNPDQNRIKRSCSLLERLHGSCKLPLVIGGDFHE----------
        +GF N  SV  SG S GL+LLW S   +S+ S SKGHIDV + ++ +  W F+GFYG  +Q   + S  LL RL        + GGDF+E          
Subjt:  MGFSNIISVGSSGNSRGLMLLWQSHLNISMNSFSKGHIDVTI-KELDWWWNFTGFYGNPDQNRIKRSCSLLERLHGSCKLPLVIGGDFHE----------

Query:  -----------------CDLIDVGFSRDRYTWARNKNNKEATREHLDRFLTNDKMWSKAKDMKVEHLNFHHSDHRPILLKIGWTNSYQQA-IFSKKKIKM
                         C+L+D+GF   + TW   ++     +E +DR L +          +V+HL ++ SDHRP+LL   + + +Q A   ++K  K 
Subjt:  -----------------CDLIDVGFSRDRYTWARNKNNKEATREHLDRFLTNDKMWSKAKDMKVEHLNFHHSDHRPILLKIGWTNSYQQA-IFSKKKIKM

Query:  EEFWPDLEGSKNAFKYAWLSSSEASNINFSKKKNQEGLAEMSKWNKNRLKGSIQGAIKRKEKEIKTL
        E FW   E      + AW       ++   ++K      ++S W+  +  GS++  I+ K+KE++ L
Subjt:  EEFWPDLEGSKNAFKYAWLSSSEASNINFSKKKNQEGLAEMSKWNKNRLKGSIQGAIKRKEKEIKTL

TXG59697.1 hypothetical protein EZV62_014270 [Acer yangbiense]1.7e-2336.45Show/hide
Query:  FSNIISVGSSGNSRGLMLLWQSHLNISMNSFSKGHIDVTIKELD-WWWNFTGFYGNPDQNRIKRSCSLLERLHGSCKLPLVIGGDFHECDLIDVGFSRDR
        F +   V   G S  LMLLW+  L +S+ SFS GHID  I+  D + W F+GFYG+P  ++   S +LL RL     LP V       CDL+D+G S   
Subjt:  FSNIISVGSSGNSRGLMLLWQSHLNISMNSFSKGHIDVTIKELD-WWWNFTGFYGNPDQNRIKRSCSLLERLHGSCKLPLVIGGDFHECDLIDVGFSRDR

Query:  YTWARNKNNKEATREHLDRFLTNDKMWSKAKDMKVEHLNFHHSDHRPILLKIGWTNSYQQAIFSKKKIKMEEFWPDLEGSKNAFKYAWLSSSEASNINFS
         TW   +  ++  +E LDRFL +     K  +  VEHL F+ SDHR ILL++    S +     +     E FW   E      K AW S+S  +++   
Subjt:  YTWARNKNNKEATREHLDRFLTNDKMWSKAKDMKVEHLNFHHSDHRPILLKIGWTNSYQQAIFSKKKIKMEEFWPDLEGSKNAFKYAWLSSSEASNINFS

Query:  KKK
        K+K
Subjt:  KKK

XP_022157437.1 uncharacterized protein LOC111024135 [Momordica charantia]6.5e-3138.33Show/hide
Query:  MGFSNIISVGSSGNSRGLMLLWQSHLNISMNSFSKGHIDVTIKELDWWWNFTGFYGNPDQNRIKRSCSLLERLHGSCKLPLVIGGDFHECDLIDVGFSRD
        + F   +SV S+G S GLMLLW S  N+ + S S GHID  I +    W FTGFYGNP   +   S  LLERL     LP +IGGDF+E     V  +  
Subjt:  MGFSNIISVGSSGNSRGLMLLWQSHLNISMNSFSKGHIDVTIKELDWWWNFTGFYGNPDQNRIKRSCSLLERLHGSCKLPLVIGGDFHECDLIDVGFSRD

Query:  RYTWARNKNNKEATR--EHLDRFLTNDKMWSKAKDMKVEHLNFHHSDHRPILLKIGWTNSYQQAIFSKKKIKMEEFWPDLEGSKNAFKYAWLSSSEASNI
             RN++        E LDRFL N+ M +K  ++KV HL    SDHRPIL    +          ++KI+ EE W  ++G ++     W  S     I
Subjt:  RYTWARNKNNKEATR--EHLDRFLTNDKMWSKAKDMKVEHLNFHHSDHRPILLKIGWTNSYQQAIFSKKKIKMEEFWPDLEGSKNAFKYAWLSSSEASNI

Query:  NFSKKKNQEGLAEMSKWNKNRLKGSIQGAIKRKEKEIKTL
           + K    L+ +++WNK RL  S++GAI  KEKE++ L
Subjt:  NFSKKKNQEGLAEMSKWNKNRLKGSIQGAIKRKEKEIKTL

XP_042950313.1 uncharacterized protein LOC122282426 [Carya illinoinensis]1.4e-2231.58Show/hide
Query:  MGFSNIISVGSSGNSRGLMLLWQSHLNISMNSFSKGHIDVTIKELDWW-WNFTGFYGNPDQNRIKRSCSLLERLHGSCKLPLVIGGDFH-----------
        +GF N  SV S G S GL LLW S L + + SFS+ HIDV IK  D   W FTG YG+PD +R   + +L+  L    +LP ++GGD +           
Subjt:  MGFSNIISVGSSGNSRGLMLLWQSHLNISMNSFSKGHIDVTIKELDWW-WNFTGFYGNPDQNRIKRSCSLLERLHGSCKLPLVIGGDFH-----------

Query:  ----------------ECDLIDVGFSRDRYTWARNKNNKEATREHLDRFLTNDKMWSKAKDMKVEHLNFHHSDHRPILLKIGWTNSYQQAIFSKKKIKME
                        EC+L D+G+   R+TW   +       EHLDRF+ ND +      + V+H N  HSDH PIL +   ++++Q      K+  +E
Subjt:  ----------------ECDLIDVGFSRDRYTWARNKNNKEATREHLDRFLTNDKMWSKAKDMKVEHLNFHHSDHRPILLKIGWTNSYQQAIFSKKKIKME

Query:  EFWPDLEGSKNAFKYAWLSSSEASNINFSKKKNQ-EGLAEMSK-WNKNRLKGSIQGAIKRKEKEIK
          W   E  +   +  W  S    N       N  +G  +  K WN++       G +K+K  E +
Subjt:  EFWPDLEGSKNAFKYAWLSSSEASNINFSKKKNQ-EGLAEMSK-WNKNRLKGSIQGAIKRKEKEIK

TrEMBL top hitse value%identityAlignment
A0A5B6U6G4 Reverse transcriptase5.4e-2332.44Show/hide
Query:  GFSNIISVGSSGNSRGLMLLWQSHLNISMNSFSKGHIDVTIKE--LDWWWNFTGFYGNPDQNRIKRSCSLLERLHGSCKLPLVIGGDFHE----------
        GF+N I+V + G+  GL L W+  + +++ S+SK HIDV IKE  +   W FTGFYG+P     K   +LLERL      P ++ GDF+E          
Subjt:  GFSNIISVGSSGNSRGLMLLWQSHLNISMNSFSKGHIDVTIKE--LDWWWNFTGFYGNPDQNRIKRSCSLLERLHGSCKLPLVIGGDFHE----------

Query:  -----------------CDLIDVGFSRDRYTWARNKNNKEATREHLDRFLTNDKMWSKAKDMKVEHLNFHHSDHRPILLKIGWTNSYQQAIFSKKKIKME
                         C L+DVGFS   +TW R   ++   RE LDR + N+K  +     +++HL F  SDH P+LL    T      I   ++   E
Subjt:  -----------------CDLIDVGFSRDRYTWARNKNNKEATREHLDRFLTNDKMWSKAKDMKVEHLNFHHSDHRPILLKIGWTNSYQQAIFSKKKIKME

Query:  EFWPDLEGSKNAFKYAWLSSSEASNINFSKKKNQEGLAEMSKWNKNRLKGSIQGAIKRKEKE
         +W   E  +   +  W SSSE   +    K  Q GL + +K  K +     +G +K+K  E
Subjt:  EFWPDLEGSKNAFKYAWLSSSEASNINFSKKKNQEGLAEMSKWNKNRLKGSIQGAIKRKEKE

A0A5C7HJN1 Uncharacterized protein1.4e-2330.34Show/hide
Query:  MGFSNIISVGSSGNSRGLMLLWQSHLNISMNSFSKGHIDVTI-KELDWWWNFTGFYGNPDQNRIKRSCSLLERLHGSCKLPLVIGGDFHE----------
        +GF N  SV  SG S GL+LLW S   +S+ S SKGHIDV + ++ +  W F+GFYG  +Q   + S  LL RL        + GGDF+E          
Subjt:  MGFSNIISVGSSGNSRGLMLLWQSHLNISMNSFSKGHIDVTI-KELDWWWNFTGFYGNPDQNRIKRSCSLLERLHGSCKLPLVIGGDFHE----------

Query:  -----------------CDLIDVGFSRDRYTWARNKNNKEATREHLDRFLTNDKMWSKAKDMKVEHLNFHHSDHRPILLKIGWTNSYQQA-IFSKKKIKM
                         C+L+D+GF   + TW   ++     +E +DR L +          +V+HL ++ SDHRP+LL   + + +Q A   ++K  K 
Subjt:  -----------------CDLIDVGFSRDRYTWARNKNNKEATREHLDRFLTNDKMWSKAKDMKVEHLNFHHSDHRPILLKIGWTNSYQQA-IFSKKKIKM

Query:  EEFWPDLEGSKNAFKYAWLSSSEASNINFSKKKNQEGLAEMSKWNKNRLKGSIQGAIKRKEKEIKTL
        E FW   E      + AW       ++   ++K      ++S W+  +  GS++  I+ K+KE++ L
Subjt:  EEFWPDLEGSKNAFKYAWLSSSEASNINFSKKKNQEGLAEMSKWNKNRLKGSIQGAIKRKEKEIKTL

A0A5C7HK10 CCHC-type domain-containing protein1.6e-2237.11Show/hide
Query:  NIISVGSSGNSRGLMLLWQSHLNISMNSFSKGHIDVTIKELD-WWWNFTGFYGNPDQNRIKRSCSLLERLHGSCKLPLVIGGDFHECDLIDVGFSRDRYT
        ++I++   G S GLML+W+  + +++ SFS GHIDV I+  D + W F+G YG+P   +  RS  LL RL    +LP + GGDF+E   ++      ++T
Subjt:  NIISVGSSGNSRGLMLLWQSHLNISMNSFSKGHIDVTIKELD-WWWNFTGFYGNPDQNRIKRSCSLLERLHGSCKLPLVIGGDFHECDLIDVGFSRDRYT

Query:  WARNKNNKEATREHLDRFLTNDKMWSKAKDMKVEHLNFHHSDHRPILLKIGWTNSYQQA
        W   +  K   +E +DR L N+    + + +KV+HL FH SDHR ILLK   ++ + ++
Subjt:  WARNKNNKEATREHLDRFLTNDKMWSKAKDMKVEHLNFHHSDHRPILLKIGWTNSYQQA

A0A5C7HRM0 Uncharacterized protein8.3e-2436.45Show/hide
Query:  FSNIISVGSSGNSRGLMLLWQSHLNISMNSFSKGHIDVTIKELD-WWWNFTGFYGNPDQNRIKRSCSLLERLHGSCKLPLVIGGDFHECDLIDVGFSRDR
        F +   V   G S  LMLLW+  L +S+ SFS GHID  I+  D + W F+GFYG+P  ++   S +LL RL     LP V       CDL+D+G S   
Subjt:  FSNIISVGSSGNSRGLMLLWQSHLNISMNSFSKGHIDVTIKELD-WWWNFTGFYGNPDQNRIKRSCSLLERLHGSCKLPLVIGGDFHECDLIDVGFSRDR

Query:  YTWARNKNNKEATREHLDRFLTNDKMWSKAKDMKVEHLNFHHSDHRPILLKIGWTNSYQQAIFSKKKIKMEEFWPDLEGSKNAFKYAWLSSSEASNINFS
         TW   +  ++  +E LDRFL +     K  +  VEHL F+ SDHR ILL++    S +     +     E FW   E      K AW S+S  +++   
Subjt:  YTWARNKNNKEATREHLDRFLTNDKMWSKAKDMKVEHLNFHHSDHRPILLKIGWTNSYQQAIFSKKKIKMEEFWPDLEGSKNAFKYAWLSSSEASNINFS

Query:  KKK
        K+K
Subjt:  KKK

A0A6J1DUG8 uncharacterized protein LOC1110241353.1e-3138.33Show/hide
Query:  MGFSNIISVGSSGNSRGLMLLWQSHLNISMNSFSKGHIDVTIKELDWWWNFTGFYGNPDQNRIKRSCSLLERLHGSCKLPLVIGGDFHECDLIDVGFSRD
        + F   +SV S+G S GLMLLW S  N+ + S S GHID  I +    W FTGFYGNP   +   S  LLERL     LP +IGGDF+E     V  +  
Subjt:  MGFSNIISVGSSGNSRGLMLLWQSHLNISMNSFSKGHIDVTIKELDWWWNFTGFYGNPDQNRIKRSCSLLERLHGSCKLPLVIGGDFHECDLIDVGFSRD

Query:  RYTWARNKNNKEATR--EHLDRFLTNDKMWSKAKDMKVEHLNFHHSDHRPILLKIGWTNSYQQAIFSKKKIKMEEFWPDLEGSKNAFKYAWLSSSEASNI
             RN++        E LDRFL N+ M +K  ++KV HL    SDHRPIL    +          ++KI+ EE W  ++G ++     W  S     I
Subjt:  RYTWARNKNNKEATR--EHLDRFLTNDKMWSKAKDMKVEHLNFHHSDHRPILLKIGWTNSYQQAIFSKKKIKMEEFWPDLEGSKNAFKYAWLSSSEASNI

Query:  NFSKKKNQEGLAEMSKWNKNRLKGSIQGAIKRKEKEIKTL
           + K    L+ +++WNK RL  S++GAI  KEKE++ L
Subjt:  NFSKKKNQEGLAEMSKWNKNRLKGSIQGAIKRKEKEIKTL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGCTTCAGTAACATCATTAGCGTAGGTAGTTCTGGGAACAGCAGAGGGCTAATGCTTCTTTGGCAAAGCCACTTGAACATCTCAATGAATTCGTTCTCCAAAGGCCA
TATTGACGTTACGATAAAGGAGCTGGATTGGTGGTGGAATTTTACAGGTTTTTATGGAAACCCTGACCAAAATAGAATAAAAAGATCCTGCAGTTTGTTGGAAAGGTTGC
ACGGTAGTTGCAAGCTCCCTTTGGTTATTGGTGGAGACTTCCACGAGTGTGACCTTATTGATGTGGGTTTTTCTAGAGACAGGTACACATGGGCGAGGAACAAAAACAAT
AAGGAAGCGACTCGAGAGCACTTGGACAGATTTCTTACCAATGATAAAATGTGGTCTAAAGCAAAAGATATGAAGGTGGAACACTTAAACTTTCACCACTCTGACCACAG
ACCAATTTTGTTGAAAATTGGGTGGACAAACTCATACCAGCAAGCTATATTCTCGAAGAAGAAAATCAAAATGGAAGAATTCTGGCCAGACCTTGAAGGAAGCAAAAATG
CTTTCAAGTATGCATGGCTTTCATCAAGTGAGGCCTCGAATATTAATTTCTCAAAAAAAAAAAATCAGGAAGGCTTGGCTGAGATGAGTAAATGGAATAAAAATAGGCTG
AAAGGATCGATCCAAGGTGCCATCAAAAGAAAAGAAAAGGAAATTAAGACGCTGACCGTAAGCCCCAACAAAACTACAAAGCAGAGAGAGATCTTGAGAAATTGGTGGAA
GAAGAAAAGAGCTACTGGAAAATTAGGGCGAGGGAGGATTGGCTCAAAACTACTCTATCCTAATAAGTGGATCACCTCAAGAGGAATTCAAGCAGAGCAGAGGCCGAAGA
CAAGGGGACCCCCTCTCCCCTACCTATTTCTCTATTGTGCTGAAGGATTTTCAGCTCTACTCAAAAGGGAGAAAACAGAGGAATCTAAAAAAATTCTCAGCATTTCTGGC
AAGGCTAAAATGAAATGTGATCTCATTTTTTGGGCAGAGGCAGACAGTTCCGAGCCCGTCGTGGGTCGTTTTGAACGAGTGTTTTGCTCACCTAACCGGTTGTTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGCTTCAGTAACATCATTAGCGTAGGTAGTTCTGGGAACAGCAGAGGGCTAATGCTTCTTTGGCAAAGCCACTTGAACATCTCAATGAATTCGTTCTCCAAAGGCCA
TATTGACGTTACGATAAAGGAGCTGGATTGGTGGTGGAATTTTACAGGTTTTTATGGAAACCCTGACCAAAATAGAATAAAAAGATCCTGCAGTTTGTTGGAAAGGTTGC
ACGGTAGTTGCAAGCTCCCTTTGGTTATTGGTGGAGACTTCCACGAGTGTGACCTTATTGATGTGGGTTTTTCTAGAGACAGGTACACATGGGCGAGGAACAAAAACAAT
AAGGAAGCGACTCGAGAGCACTTGGACAGATTTCTTACCAATGATAAAATGTGGTCTAAAGCAAAAGATATGAAGGTGGAACACTTAAACTTTCACCACTCTGACCACAG
ACCAATTTTGTTGAAAATTGGGTGGACAAACTCATACCAGCAAGCTATATTCTCGAAGAAGAAAATCAAAATGGAAGAATTCTGGCCAGACCTTGAAGGAAGCAAAAATG
CTTTCAAGTATGCATGGCTTTCATCAAGTGAGGCCTCGAATATTAATTTCTCAAAAAAAAAAAATCAGGAAGGCTTGGCTGAGATGAGTAAATGGAATAAAAATAGGCTG
AAAGGATCGATCCAAGGTGCCATCAAAAGAAAAGAAAAGGAAATTAAGACGCTGACCGTAAGCCCCAACAAAACTACAAAGCAGAGAGAGATCTTGAGAAATTGGTGGAA
GAAGAAAAGAGCTACTGGAAAATTAGGGCGAGGGAGGATTGGCTCAAAACTACTCTATCCTAATAAGTGGATCACCTCAAGAGGAATTCAAGCAGAGCAGAGGCCGAAGA
CAAGGGGACCCCCTCTCCCCTACCTATTTCTCTATTGTGCTGAAGGATTTTCAGCTCTACTCAAAAGGGAGAAAACAGAGGAATCTAAAAAAATTCTCAGCATTTCTGGC
AAGGCTAAAATGAAATGTGATCTCATTTTTTGGGCAGAGGCAGACAGTTCCGAGCCCGTCGTGGGTCGTTTTGAACGAGTGTTTTGCTCACCTAACCGGTTGTTTTGA
Protein sequenceShow/hide protein sequence
MGFSNIISVGSSGNSRGLMLLWQSHLNISMNSFSKGHIDVTIKELDWWWNFTGFYGNPDQNRIKRSCSLLERLHGSCKLPLVIGGDFHECDLIDVGFSRDRYTWARNKNN
KEATREHLDRFLTNDKMWSKAKDMKVEHLNFHHSDHRPILLKIGWTNSYQQAIFSKKKIKMEEFWPDLEGSKNAFKYAWLSSSEASNINFSKKKNQEGLAEMSKWNKNRL
KGSIQGAIKRKEKEIKTLTVSPNKTTKQREILRNWWKKKRATGKLGRGRIGSKLLYPNKWITSRGIQAEQRPKTRGPPLPYLFLYCAEGFSALLKREKTEESKKILSISG
KAKMKCDLIFWAEADSSEPVVGRFERVFCSPNRLF