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Lag0032229 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0032229
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRNA-directed DNA polymerase-like protein
Genome locationchr11:27732635..27733308
RNA-Seq ExpressionLag0032229
SyntenyLag0032229
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TYK05713.1 RNA-directed DNA polymerase-like protein [Cucumis melo var. makuwa]8.4e-0534.82Show/hide
Query:  SKRKPSSTLTEGSSQNGKEIDEVTENVEKSEWIGRKGAPIRTGGDYGKFKRLEMPVSNGVNPDSTPLPEMLEVFENTFLNGLKPTIMTTVVSIQPVGLED
        S R   S   E +   GKE +  +  +  S+   +K     +  D  KFK++EMPV  G +PDS  L     V E+TF+NGL P I   V   +P G  +
Subjt:  SKRKPSSTLTEGSSQNGKEIDEVTENVEKSEWIGRKGAPIRTGGDYGKFKRLEMPVSNGVNPDSTPLPEMLEVFENTFLNGLKPTIMTTVVSIQPVGLED

Query:  IMKQVQLIEDRD
         M+  QL+E+R+
Subjt:  IMKQVQLIEDRD
XP_038898276.1 uncharacterized protein LOC120085983 isoform X1 [Benincasa hispida]5.5e-0445Show/hide
Query:  STPLPEML-EVFENTFLNGLKPTIMTTVVSIQPVGLEDIMKQVQLIEDRDEAIQLAIATL
        STPLP++  EV  + F+NGL+PT+   V+S +P  LE+ M + QL+ DR+ A+++A+A L
Subjt:  STPLPEML-EVFENTFLNGLKPTIMTTVVSIQPVGLEDIMKQVQLIEDRDEAIQLAIATL
TrEMBL top hitse value%identityAlignment
A0A5D3C197 RNA-directed DNA polymerase-like protein4.1e-0534.82Show/hide
Query:  SKRKPSSTLTEGSSQNGKEIDEVTENVEKSEWIGRKGAPIRTGGDYGKFKRLEMPVSNGVNPDSTPLPEMLEVFENTFLNGLKPTIMTTVVSIQPVGLED
        S R   S   E +   GKE +  +  +  S+   +K     +  D  KFK++EMPV  G +PDS  L     V E+TF+NGL P I   V   +P G  +
Subjt:  SKRKPSSTLTEGSSQNGKEIDEVTENVEKSEWIGRKGAPIRTGGDYGKFKRLEMPVSNGVNPDSTPLPEMLEVFENTFLNGLKPTIMTTVVSIQPVGLED

Query:  IMKQVQLIEDRD
         M+  QL+E+R+
Subjt:  IMKQVQLIEDRD
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATGTTAGCTGATGTGATGGTGAGCAAGAGGAAACCATCTTCTACTCTCACCGAAGGGTCTAGTCAAAATGGAAAAGAAATAGATGAGGTCACTGAGAATGTTGAGAA
ATCAGAGTGGATTGGCCGCAAGGGAGCACCGATTCGAACTGGGGGAGACTATGGAAAGTTTAAGCGATTGGAAATGCCCGTTTCCAATGGCGTGAACCCCGACTCCACAC
CCTTACCGGAGATGCTGGAGGTGTTCGAAAATACGTTTCTGAATGGGTTAAAACCGACGATCATGACAACAGTGGTCAGTATACAGCCAGTTGGGCTAGAAGATATCATG
AAGCAAGTTCAATTGATTGAAGACAGGGATGAAGCCATTCAGCTAGCCATCGCGACCTTGATGGATACATAA
mRNA sequenceShow/hide mRNA sequence
ATGATGTTAGCTGATGTGATGGTGAGCAAGAGGAAACCATCTTCTACTCTCACCGAAGGGTCTAGTCAAAATGGAAAAGAAATAGATGAGGTCACTGAGAATGTTGAGAA
ATCAGAGTGGATTGGCCGCAAGGGAGCACCGATTCGAACTGGGGGAGACTATGGAAAGTTTAAGCGATTGGAAATGCCCGTTTCCAATGGCGTGAACCCCGACTCCACAC
CCTTACCGGAGATGCTGGAGGTGTTCGAAAATACGTTTCTGAATGGGTTAAAACCGACGATCATGACAACAGTGGTCAGTATACAGCCAGTTGGGCTAGAAGATATCATG
AAGCAAGTTCAATTGATTGAAGACAGGGATGAAGCCATTCAGCTAGCCATCGCGACCTTGATGGATACATAA
Protein sequenceShow/hide protein sequence
MMLADVMVSKRKPSSTLTEGSSQNGKEIDEVTENVEKSEWIGRKGAPIRTGGDYGKFKRLEMPVSNGVNPDSTPLPEMLEVFENTFLNGLKPTIMTTVVSIQPVGLEDIM
KQVQLIEDRDEAIQLAIATLMDT