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Lag0032243 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0032243
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationchr11:28211233..28211864
RNA-Seq ExpressionLag0032243
SyntenyLag0032243
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
PON78020.1 hypothetical protein PanWU01x14_023740 [Parasponia andersonii]8.2e-1339.68Show/hide
Query:  VEEDPKEPEEQNPEQLSDAVREVGVEGAQWRLSKTLKRTFQSAYLKKEANTWMGFIKQRLLPMTHDSKVSRERVLLAFVILRSLSIDVGKIIASEISGCW
        V+E  +  E     +L   +  V   GA+W +S     T   + L   A  W  F+K RLLP TH   VS++R+LL   +L   SI+VG++I SEI  C 
Subjt:  VEEDPKEPEEQNPEQLSDAVREVGVEGAQWRLSKTLKRTFQSAYLKKEANTWMGFIKQRLLPMTHDSKVSRERVLLAFVILRSLSIDVGKIIASEISGCW

Query:  KKKVGKLFFPNTITMLCKRAGVLENE
         +K G LFFP+ IT LC+ A  L NE
Subjt:  KKKVGKLFFPNTITMLCKRAGVLENE

TYH88163.1 hypothetical protein ES332_D01G168900v1 [Gossypium tomentosum]2.8e-1340.32Show/hide
Query:  VEEDPKEP--EEQNPEQLSDAVREVGVEGAQWRLSKTLKRTFQSAYLKKEANTWMGFIKQRLLPMTHDSKVSRERVLLAFVILRSLSIDVGKIIASEISG
        VEED   P     N + L   +  V   G+QW + K    + +  YLK  AN W  F++   +P++H   +S ER+LL + IL   SI+VGKII  EI  
Subjt:  VEEDPKEP--EEQNPEQLSDAVREVGVEGAQWRLSKTLKRTFQSAYLKKEANTWMGFIKQRLLPMTHDSKVSRERVLLAFVILRSLSIDVGKIIASEISG

Query:  CWKKKVGKLFFPNTITMLCKRAGV
        C KKK G ++FP+ IT LC +A V
Subjt:  CWKKKVGKLFFPNTITMLCKRAGV

TYI22425.1 hypothetical protein ES332_A06G102500v1 [Gossypium tomentosum]8.2e-1338.17Show/hide
Query:  VEEDPKEPEEQN-----PEQLSDAVREVGVEGAQWRLSKTLKRTFQSAYLKKEANTWMGFIKQRLLPMTHDSKVSRERVLLAFVILRSLSIDVGKIIASE
        VEED   P   N      +Q+ D +  +   G+QW + K    + Q  YLK  A  W  F++   +P++H S +  E++L  +VIL   SI+VGKII  E
Subjt:  VEEDPKEPEEQN-----PEQLSDAVREVGVEGAQWRLSKTLKRTFQSAYLKKEANTWMGFIKQRLLPMTHDSKVSRERVLLAFVILRSLSIDVGKIIASE

Query:  ISGCWKKKVGKLFFPNTITMLCKRAGVLENE
        I  C KKK+G  +FP+ IT +C RA V   E
Subjt:  ISGCWKKKVGKLFFPNTITMLCKRAGVLENE

XP_024971944.1 uncharacterized protein LOC112510826 [Cynara cardunculus var. scolymus]8.8e-1538.14Show/hide
Query:  QLSDAVREVGVEGAQWRL-SKTLKRTFQSAYLKKEANTWMGFIKQRLLPMTHDSKVSRERVLLAFVILRSLSIDVGKIIASEISGCWKKKVGKLFFPNTI
        +L +  RE+G  G +W   S  + RT++++ LK  AN W+ FI+  L P THDS +S E+++L + ++   +I+VGK++   I  C K++ GKLFFP+ I
Subjt:  QLSDAVREVGVEGAQWRL-SKTLKRTFQSAYLKKEANTWMGFIKQRLLPMTHDSKVSRERVLLAFVILRSLSIDVGKIIASEISGCWKKKVGKLFFPNTI

Query:  TMLCKRAGVLENEGDVTL
          L  +AGV E   D+ +
Subjt:  TMLCKRAGVLENEGDVTL

XP_024995361.1 formin-like protein 3 [Cynara cardunculus var. scolymus]7.4e-1437.98Show/hide
Query:  EQLSDAVREVGVEGAQWRLSKTLKRTFQSAYLKKEANTWMGFIKQRLLPMTHDSKVSRERVLLAFVILRSLSIDVGKIIASEISGCWKKKVGKLFFPNTI
        E+L   + +V  EG  W   K   R  ++ YLK EAN W  F++  + PM+HD+ +  ERVL+ + IL +   DVG++I S I  C ++  GKL +P+ I
Subjt:  EQLSDAVREVGVEGAQWRLSKTLKRTFQSAYLKKEANTWMGFIKQRLLPMTHDSKVSRERVLLAFVILRSLSIDVGKIIASEISGCWKKKVGKLFFPNTI

Query:  TMLCKRAGVLENEGDVTLFDKGIIDTPNL
          L ++A VL    DV   +K  ID  NL
Subjt:  TMLCKRAGVLENEGDVTLFDKGIIDTPNL

TrEMBL top hitse value%identityAlignment
A0A2P5BNT0 Uncharacterized protein (Fragment)1.2e-1235.25Show/hide
Query:  VVEEDPKEPEEQNPEQLSDAVREVGVEGAQWRLSKTLKRTFQSAYLKKEANTWMGFIKQRLLPMTHDSKVSRERVLLAFVILRSLSIDVGKIIASEISGC
        +V+E  +  E+    +L+  +  V + GA+W +S     T   + L   A  W  F+K RLLP TH   VS+ERVLL + +L   SI++G++I  EI  C
Subjt:  VVEEDPKEPEEQNPEQLSDAVREVGVEGAQWRLSKTLKRTFQSAYLKKEANTWMGFIKQRLLPMTHDSKVSRERVLLAFVILRSLSIDVGKIIASEISGC

Query:  WKKKVGKLFFPNTITMLCKRAGVLENEGDVTLFDKGIID
          +K G LFFP+ I  +C+ A       +  L + G ID
Subjt:  WKKKVGKLFFPNTITMLCKRAGVLENEGDVTLFDKGIID

A0A2P5DXM3 Uncharacterized protein4.0e-1339.68Show/hide
Query:  VEEDPKEPEEQNPEQLSDAVREVGVEGAQWRLSKTLKRTFQSAYLKKEANTWMGFIKQRLLPMTHDSKVSRERVLLAFVILRSLSIDVGKIIASEISGCW
        V+E  +  E     +L   +  V   GA+W +S     T   + L   A  W  F+K RLLP TH   VS++R+LL   +L   SI+VG++I SEI  C 
Subjt:  VEEDPKEPEEQNPEQLSDAVREVGVEGAQWRLSKTLKRTFQSAYLKKEANTWMGFIKQRLLPMTHDSKVSRERVLLAFVILRSLSIDVGKIIASEISGCW

Query:  KKKVGKLFFPNTITMLCKRAGVLENE
         +K G LFFP+ IT LC+ A  L NE
Subjt:  KKKVGKLFFPNTITMLCKRAGVLENE

A0A5D2MA47 Uncharacterized protein1.4e-1340.32Show/hide
Query:  VEEDPKEP--EEQNPEQLSDAVREVGVEGAQWRLSKTLKRTFQSAYLKKEANTWMGFIKQRLLPMTHDSKVSRERVLLAFVILRSLSIDVGKIIASEISG
        VEED   P     N + L   +  V   G+QW + K    + +  YLK  AN W  F++   +P++H   +S ER+LL + IL   SI+VGKII  EI  
Subjt:  VEEDPKEP--EEQNPEQLSDAVREVGVEGAQWRLSKTLKRTFQSAYLKKEANTWMGFIKQRLLPMTHDSKVSRERVLLAFVILRSLSIDVGKIIASEISG

Query:  CWKKKVGKLFFPNTITMLCKRAGV
        C KKK G ++FP+ IT LC +A V
Subjt:  CWKKKVGKLFFPNTITMLCKRAGV

A0A5D2Q4A4 Uncharacterized protein4.0e-1338.17Show/hide
Query:  VEEDPKEPEEQN-----PEQLSDAVREVGVEGAQWRLSKTLKRTFQSAYLKKEANTWMGFIKQRLLPMTHDSKVSRERVLLAFVILRSLSIDVGKIIASE
        VEED   P   N      +Q+ D +  +   G+QW + K    + Q  YLK  A  W  F++   +P++H S +  E++L  +VIL   SI+VGKII  E
Subjt:  VEEDPKEPEEQN-----PEQLSDAVREVGVEGAQWRLSKTLKRTFQSAYLKKEANTWMGFIKQRLLPMTHDSKVSRERVLLAFVILRSLSIDVGKIIASE

Query:  ISGCWKKKVGKLFFPNTITMLCKRAGVLENE
        I  C KKK+G  +FP+ IT +C RA V   E
Subjt:  ISGCWKKKVGKLFFPNTITMLCKRAGVLENE

W9QTD9 Uncharacterized protein2.0e-1233.79Show/hide
Query:  VVEEDPKEPEEQNPEQLSDAVREVGVEGAQWRLSKTLKRTFQSAYLKKEANTWMGFIKQRLLPMTHDSKVSRERVLLAFVILRSLSIDVGKIIASEISGC
        VV+E      E   EQL   + EV +EGA W++S     T     LK+ A  W  F+  R +P TH   V+++RVLL + IL  +S+++ +I   EI  C
Subjt:  VVEEDPKEPEEQNPEQLSDAVREVGVEGAQWRLSKTLKRTFQSAYLKKEANTWMGFIKQRLLPMTHDSKVSRERVLLAFVILRSLSIDVGKIIASEISGC

Query:  -WKKKVGKLFFPNTITMLCKRAGVLENEGDVTLFDKGIIDTPNLA
           +K G L+FP+ IT L  +A V  ++ +  + + G I T +++
Subjt:  -WKKKVGKLFFPNTITMLCKRAGVLENEGDVTLFDKGIIDTPNLA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGAAAACGAGAGCAAGAAAAGAGAGAGATAATGAGGAAGAAGAGAAGGTTGTGGAAGATGTTGTTGCCACAGTAGTTGAAGAAGACCCGAAGGAACCAGAAGAACA
AAATCCAGAGCAGTTAAGTGATGCTGTGAGGGAAGTTGGTGTTGAGGGGGCACAGTGGAGGCTTTCAAAAACTCTGAAGAGGACGTTTCAGTCAGCCTATTTGAAGAAGG
AAGCAAATACATGGATGGGGTTTATCAAACAAAGGTTGCTTCCAATGACTCATGACTCGAAGGTTTCAAGGGAACGAGTTCTTCTAGCTTTCGTGATTTTGAGGTCTCTC
AGCATTGATGTAGGAAAGATTATTGCTAGTGAAATATCTGGTTGCTGGAAAAAGAAAGTGGGGAAATTGTTTTTCCCGAATACGATCACAATGCTTTGCAAGCGAGCAGG
GGTTCTGGAGAATGAAGGAGATGTCACACTATTTGACAAGGGAATCATTGATACGCCTAACTTGGCGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCGAAAACGAGAGCAAGAAAAGAGAGAGATAATGAGGAAGAAGAGAAGGTTGTGGAAGATGTTGTTGCCACAGTAGTTGAAGAAGACCCGAAGGAACCAGAAGAACA
AAATCCAGAGCAGTTAAGTGATGCTGTGAGGGAAGTTGGTGTTGAGGGGGCACAGTGGAGGCTTTCAAAAACTCTGAAGAGGACGTTTCAGTCAGCCTATTTGAAGAAGG
AAGCAAATACATGGATGGGGTTTATCAAACAAAGGTTGCTTCCAATGACTCATGACTCGAAGGTTTCAAGGGAACGAGTTCTTCTAGCTTTCGTGATTTTGAGGTCTCTC
AGCATTGATGTAGGAAAGATTATTGCTAGTGAAATATCTGGTTGCTGGAAAAAGAAAGTGGGGAAATTGTTTTTCCCGAATACGATCACAATGCTTTGCAAGCGAGCAGG
GGTTCTGGAGAATGAAGGAGATGTCACACTATTTGACAAGGGAATCATTGATACGCCTAACTTGGCGTAG
Protein sequenceShow/hide protein sequence
MAKTRARKERDNEEEEKVVEDVVATVVEEDPKEPEEQNPEQLSDAVREVGVEGAQWRLSKTLKRTFQSAYLKKEANTWMGFIKQRLLPMTHDSKVSRERVLLAFVILRSL
SIDVGKIIASEISGCWKKKVGKLFFPNTITMLCKRAGVLENEGDVTLFDKGIIDTPNLA