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Lag0032246 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0032246
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRetrovirus-related Pol polyprotein from transposon 17.6
Genome locationchr11:28391639..28392055
RNA-Seq ExpressionLag0032246
SyntenyLag0032246
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_023874613.1 uncharacterized protein LOC111987139 [Quercus suber]8.4e-1639.33Show/hide
Query:  MASLTNALNKLTSFEVVKSISTLAEGYS--KKEGQDMEEVQYIGNKPFT---QGVSNFYHPSLRNHENFSYSNMKNVLQPPPGFASSSTPEKKNNLEEMV
        +ASL++ ++ LT+  + +    +A             E+VQYI N+ +      + N+YHP LRNHENFSY N KNVLQPPPGF  S   EKK +LE+ +
Subjt:  MASLTNALNKLTSFEVVKSISTLAEGYS--KKEGQDMEEVQYIGNKPFT---QGVSNFYHPSLRNHENFSYSNMKNVLQPPPGFASSSTPEKKNNLEEMV

Query:  TLFIKEQKVLNV-------NLQMRVNNHHTALKNMEVQIGQIASAVNALQ
          F++E K           N++   +N    +KN+EVQIGQ+A+ +NA Q
Subjt:  TLFIKEQKVLNV-------NLQMRVNNHHTALKNMEVQIGQIASAVNALQ

XP_023903214.1 uncharacterized protein LOC112015077 [Quercus suber]8.4e-1640Show/hide
Query:  MASLTNALNKLTSFEVVKSISTLAEGYS--KKEGQDMEEVQYIGNKPFT---QGVSNFYHPSLRNHENFSYSNMKNVLQPPPGFASSSTPEKKNNLEEMV
        +ASL++ ++ L++  + +S   +A             E+VQYI N+ +      + N+YHP LRNHENFSY N KNVLQPPPGF  S   EKK +LE+ +
Subjt:  MASLTNALNKLTSFEVVKSISTLAEGYS--KKEGQDMEEVQYIGNKPFT---QGVSNFYHPSLRNHENFSYSNMKNVLQPPPGFASSSTPEKKNNLEEMV

Query:  TLFIKEQKVLNVNLQMRVNNHHT-------ALKNMEVQIGQIASAVNALQ
          F++E K        R++N  T        +KN+EVQIGQ+A+ +NA Q
Subjt:  TLFIKEQKVLNVNLQMRVNNHHT-------ALKNMEVQIGQIASAVNALQ

XP_023929660.1 uncharacterized protein LOC112040975 [Quercus suber]3.8e-1640Show/hide
Query:  MASLTNALNKLTSFEVVKSISTLAEGYS--KKEGQDMEEVQYIGNKPFT---QGVSNFYHPSLRNHENFSYSNMKNVLQPPPGFASSSTPEKKNNLEEMV
        +ASL++ ++ LT+  + +S+  +A             E VQYI N+ +      + N+YHP LRNHENFSY N KNVLQPPPGF  S   EKK +LE+ +
Subjt:  MASLTNALNKLTSFEVVKSISTLAEGYS--KKEGQDMEEVQYIGNKPFT---QGVSNFYHPSLRNHENFSYSNMKNVLQPPPGFASSSTPEKKNNLEEMV

Query:  TLFIKEQKV-------LNVNLQMRVNNHHTALKNMEVQIGQIASAVNALQ
          F++E K           N++   +N    +KN+EVQIGQ+A+ +NA Q
Subjt:  TLFIKEQKV-------LNVNLQMRVNNHHTALKNMEVQIGQIASAVNALQ

XP_030969898.1 uncharacterized protein LOC115990189 [Quercus lobata]1.1e-1540.67Show/hide
Query:  MASLTNALNKLTSFEVVKSISTLAEGYS--KKEGQDMEEVQYIGNKPFT---QGVSNFYHPSLRNHENFSYSNMKNVLQPPPGFASSSTPEKKNNLEEMV
        +ASL+  ++ LT+  + +S   +A             E+VQYI N+ +      + N+YHP LRNHENFSY N KNVLQPPPGF  S   EKK +LE+ +
Subjt:  MASLTNALNKLTSFEVVKSISTLAEGYS--KKEGQDMEEVQYIGNKPFT---QGVSNFYHPSLRNHENFSYSNMKNVLQPPPGFASSSTPEKKNNLEEMV

Query:  TLFIKEQKVLNVNLQMRVNNHHT-------ALKNMEVQIGQIASAVNALQ
          F++E K        R++N  T        +KN+EVQIGQ+A+ +NA Q
Subjt:  TLFIKEQKVLNVNLQMRVNNHHT-------ALKNMEVQIGQIASAVNALQ

XP_030970157.1 uncharacterized protein LOC115990464 [Quercus lobata]1.0e-1640.67Show/hide
Query:  MASLTNALNKLTSFEVVKSISTLAEGYSKKEGQDM--EEVQYIGNKPFT---QGVSNFYHPSLRNHENFSYSNMKNVLQPPPGFASSSTPEKKNNLEEMV
        +ASL++ ++ LT+  + +S   +A         ++  E+VQYI N+ +      + N+YHP LRNHENFSY N KNVLQPPPGF  S   EKK +LE+ +
Subjt:  MASLTNALNKLTSFEVVKSISTLAEGYSKKEGQDM--EEVQYIGNKPFT---QGVSNFYHPSLRNHENFSYSNMKNVLQPPPGFASSSTPEKKNNLEEMV

Query:  TLFIKEQKVLNV-------NLQMRVNNHHTALKNMEVQIGQIASAVNALQ
          F++E K           N++   NN    +KN+EVQIGQ+A+ +NA Q
Subjt:  TLFIKEQKVLNV-------NLQMRVNNHHTALKNMEVQIGQIASAVNALQ

TrEMBL top hitse value%identityAlignment
A0A2I4FP56 uncharacterized protein LOC1090008374.7e-1242.98Show/hide
Query:  EEVQYIGNKPFT---QGVSNFYHPSLRNHENFSYSNMKNVLQP-PPGFASSSTPEKKNNLEEMVTLFI-------KEQKVLNVNLQMRVNNHHTALKNME
        E+VQYI N+ +      + N +HP LRNHEN SY N KNVLQP PP   +S + +KK +LE  +  F+       KE      N++   +N   A+KN+E
Subjt:  EEVQYIGNKPFT---QGVSNFYHPSLRNHENFSYSNMKNVLQP-PPGFASSSTPEKKNNLEEMVTLFI-------KEQKVLNVNLQMRVNNHHTALKNME

Query:  VQIGQIASAVNALQ
        VQIGQ+A+ +NA Q
Subjt:  VQIGQIASAVNALQ

A0A2I4G4Q3 uncharacterized protein LOC1090047129.4e-1338.71Show/hide
Query:  MASLTNALNKLTSFEVVKS----ISTLAEGYSKKEGQDMEEVQYIGNKPFT---QGVSNFYHPSLRNHENFSYSNMKNVL--QPPPGFASSSTPEKKNNL
        +A+L++ ++ LT+  + +S    ++T     S +  Q  E+VQYI N+ +      + N+YHP  +NHEN SY N KNVL  QPPPGF S S+ EKK +L
Subjt:  MASLTNALNKLTSFEVVKS----ISTLAEGYSKKEGQDMEEVQYIGNKPFT---QGVSNFYHPSLRNHENFSYSNMKNVL--QPPPGFASSSTPEKKNNL

Query:  EEMVTLFIKEQKVLNVNLQMRVNNHHT--------ALKNMEVQIGQIASAVNALQ
        E+ +  FI+E          R++N  T          KN+EVQIGQ+A+ +NA Q
Subjt:  EEMVTLFIKEQKVLNVNLQMRVNNHHT--------ALKNMEVQIGQIASAVNALQ

A0A6P9DWY0 uncharacterized protein LOC1183440261.1e-1338.67Show/hide
Query:  MASLTNALNKLTSFEVVKSISTLAEGYSKKEGQD--MEEVQYIGNKPFT---QGVSNFYHPSLRNHENFSYSNMKNVLQPPPGFASSSTPEKKNNLEEMV
        +ASL++ ++ LT+  + +S   +A         +   E+VQYI N+ +      + N+YH  LRNHEN SY N KNVLQP PGF  S   EKK +LE+ +
Subjt:  MASLTNALNKLTSFEVVKSISTLAEGYSKKEGQD--MEEVQYIGNKPFT---QGVSNFYHPSLRNHENFSYSNMKNVLQPPPGFASSSTPEKKNNLEEMV

Query:  TLFIKEQKVLNVNLQMRVNNHHT-------ALKNMEVQIGQIASAVNALQ
          F++E          R++N  T       A+KN+EVQIGQ+A+ +NA Q
Subjt:  TLFIKEQKVLNVNLQMRVNNHHT-------ALKNMEVQIGQIASAVNALQ

A0A6P9F5T6 uncharacterized protein LOC1089899761.2e-1243.22Show/hide
Query:  QDMEEVQYIGNKPFT---QGVSNFYHPSLRNHENFSYSNMKNVL--QPPPGFASSSTPEKKNNLEEMVTLFIKEQKVLNVNLQMRVNNHHT-------AL
        +  E+VQYI N  +      + N+Y+P L+NHEN SY N KNVL  QPPPGF S S+ EKK +LE+ +  F++E  V       R++N  T        +
Subjt:  QDMEEVQYIGNKPFT---QGVSNFYHPSLRNHENFSYSNMKNVL--QPPPGFASSSTPEKKNNLEEMVTLFIKEQKVLNVNLQMRVNNHHT-------AL

Query:  KNMEVQIGQIASAVNALQ
        KN+EVQIGQ+A  +N+ Q
Subjt:  KNMEVQIGQIASAVNALQ

A0A803P9R0 Uncharacterized protein2.0e-1536.91Show/hide
Query:  ASLTNALNKLTSFEVVKSIST----LAEGYSKKEGQDMEEVQYIGNKPFT---QG--VSNFYHPSLRNHENFSYSNMKNVLQPPPGFASSSTPEKKNNLE
        A ++   N++ +    K+ ST    +A   S+     +E+ QY+ N+P+    QG  + N+YHP LRNHEN SY N KN+LQPPPGF +   PEKK +LE
Subjt:  ASLTNALNKLTSFEVVKSIST----LAEGYSKKEGQDMEEVQYIGNKPFT---QG--VSNFYHPSLRNHENFSYSNMKNVLQPPPGFASSSTPEKKNNLE

Query:  EMVTLFIKE-------QKVLNVNLQMRVNNHHTALKNMEVQIGQIASAV
        +++  F+ E        +V   N++  ++N   ++KN+E+Q+GQ+A A+
Subjt:  EMVTLFIKE-------QKVLNVNLQMRVNNHHTALKNMEVQIGQIASAV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCATCGTTAACCAATGCGCTGAACAAGTTGACTTCATTTGAGGTGGTCAAATCCATTTCCACCTTAGCTGAAGGATATTCGAAGAAAGAAGGTCAAGATATGGAAGA
AGTCCAGTACATAGGAAACAAACCATTTACTCAAGGAGTATCGAACTTCTACCACCCCAGTCTGCGCAATCACGAGAACTTCTCATATTCGAATATGAAGAATGTTTTGC
AGCCACCGCCAGGTTTTGCATCATCCAGTACGCCTGAAAAAAAGAATAACCTGGAGGAGATGGTGACTTTGTTTATTAAAGAACAAAAAGTGTTAAACGTGAATCTCCAG
ATGAGAGTAAATAACCACCACACAGCTCTGAAAAACATGGAAGTGCAAATAGGACAGATCGCTTCAGCGGTGAATGCCCTTCAATAG
mRNA sequenceShow/hide mRNA sequence
ATGGCATCGTTAACCAATGCGCTGAACAAGTTGACTTCATTTGAGGTGGTCAAATCCATTTCCACCTTAGCTGAAGGATATTCGAAGAAAGAAGGTCAAGATATGGAAGA
AGTCCAGTACATAGGAAACAAACCATTTACTCAAGGAGTATCGAACTTCTACCACCCCAGTCTGCGCAATCACGAGAACTTCTCATATTCGAATATGAAGAATGTTTTGC
AGCCACCGCCAGGTTTTGCATCATCCAGTACGCCTGAAAAAAAGAATAACCTGGAGGAGATGGTGACTTTGTTTATTAAAGAACAAAAAGTGTTAAACGTGAATCTCCAG
ATGAGAGTAAATAACCACCACACAGCTCTGAAAAACATGGAAGTGCAAATAGGACAGATCGCTTCAGCGGTGAATGCCCTTCAATAG
Protein sequenceShow/hide protein sequence
MASLTNALNKLTSFEVVKSISTLAEGYSKKEGQDMEEVQYIGNKPFTQGVSNFYHPSLRNHENFSYSNMKNVLQPPPGFASSSTPEKKNNLEEMVTLFIKEQKVLNVNLQ
MRVNNHHTALKNMEVQIGQIASAVNALQ