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Lag0032253 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0032253
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionZinc CCHC-type-like protein
Genome locationchr11:28585091..28586044
RNA-Seq ExpressionLag0032253
SyntenyLag0032253
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR001878 - Zinc finger, CCHC-type
IPR025558 - Domain of unknown function DUF4283
IPR025836 - Zinc knuckle CX2CX4HX4C
IPR036875 - Zinc finger, CCHC-type superfamily
IPR040256 - Uncharacterized protein At4g02000-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
GAU41525.1 hypothetical protein TSUD_140560 [Trifolium subterraneum]6.2e-2236.02Show/hide
Query:  MRIINLPMGFRNECVARKIGSILGEFLDWDSNKQYTSWGNSIRIKVRLDISKPLRRGLMLESDGVEDNCWVTIRYERLPDFCFGCGRIGHAAKECQEIED
        +R+ +LP   R+E +A+K+G+I+G F + D  K     G  +R+K  LD+ KPL+RG  ++    + N WV  +YERLP+FCF CG+IGH  KEC+++ED
Subjt:  MRIINLPMGFRNECVARKIGSILGEFLDWDSNKQYTSWGNSIRIKVRLDISKPLRRGLMLESDGVEDNCWVTIRYERLPDFCFGCGRIGHAAKECQEIED

Query:  MEEARRYNL-----EYGAWLKFQGFSRLFTKLDIPPDKERKDSEPNMTSKDAGNEMSKGEG
        ++E    ++      YG WL+     R+F       ++ RKD+     SK+     S+ +G
Subjt:  MEEARRYNL-----EYGAWLKFQGFSRLFTKLDIPPDKERKDSEPNMTSKDAGNEMSKGEG

KAF5469007.1 hypothetical protein F2P56_013112 [Juglans regia]1.1e-2147.93Show/hide
Query:  MRIINLPMGFRNECVARKIGSILGEFLDWDSNKQYTSWGNSIRIKVRLDISKPLRRGLMLESDGVEDNCWVTIRYERLPDFCFGCGRIGHAAKECQEIED
        +RI +LP+  RN  V + IGS++GEFL+ D  K    WG  +R++V LDIS PL+R   L+  G E+ CWV + YERLPDFC+ CG +GH+ +EC E   
Subjt:  MRIINLPMGFRNECVARKIGSILGEFLDWDSNKQYTSWGNSIRIKVRLDISKPLRRGLMLESDGVEDNCWVTIRYERLPDFCFGCGRIGHAAKECQEIED

Query:  MEEARRYNLEYGAWLKFQGFS
        +  A    L YGAWL+  GFS
Subjt:  MEEARRYNLEYGAWLKFQGFS

XP_022132681.1 uncharacterized protein LOC111005481 [Momordica charantia]6.2e-2240.34Show/hide
Query:  MRIINLPMGFRNECVARKIGSILGEFLDWDSNKQYTSWGNSIRIKVRLDISKPLRRGLMLESDGVEDNCWVTIRYERLPDFCFGCGRIGHAAKECQEIED
        +   +L +   N+ +A ++G+ +G F D +SN     WG+ +R++VR D+ KPL RG+ L  DG    CW+ I+YERLPDF + CGR+ H  K+C +   
Subjt:  MRIINLPMGFRNECVARKIGSILGEFLDWDSNKQYTSWGNSIRIKVRLDISKPLRRGLMLESDGVEDNCWVTIRYERLPDFCFGCGRIGHAAKECQEIED

Query:  MEEARRYNLEYGAWLKFQG
          ++   NL+YG WL+FQG
Subjt:  MEEARRYNLEYGAWLKFQG

XP_022156185.1 uncharacterized protein LOC111023135 [Momordica charantia]1.2e-2540.38Show/hide
Query:  MRIINLPMGFRNECVARKIGSILGEFLDWDSNKQYTSWGNSIRIKVRLDISKPLRRGLMLESDGVEDNCWVTIRYERLPDFCFGCGRIGHAAKECQ-EIE
        + + +LPM + N+ +A ++G+ +G F+D D N++  SWG S+RI+V +DI+KPLRRG+ +  DG    CW+ I+YERLPDFC+ CG IGH++ +C     
Subjt:  MRIINLPMGFRNECVARKIGSILGEFLDWDSNKQYTSWGNSIRIKVRLDISKPLRRGLMLESDGVEDNCWVTIRYERLPDFCFGCGRIGHAAKECQ-EIE

Query:  DMEEARRYNLEYGAWLKFQGFSRLFTKLDIPPDKERKDS--EPNMTSKDAGNEMSK
          ++  R   EYG WL+F G      K        R+DS    +M SK+ G E +K
Subjt:  DMEEARRYNLEYGAWLKFQGFSRLFTKLDIPPDKERKDS--EPNMTSKDAGNEMSK

XP_035546641.1 uncharacterized protein LOC108984200 [Juglans regia]1.1e-2147.93Show/hide
Query:  MRIINLPMGFRNECVARKIGSILGEFLDWDSNKQYTSWGNSIRIKVRLDISKPLRRGLMLESDGVEDNCWVTIRYERLPDFCFGCGRIGHAAKECQEIED
        +RI +LP+  RN  V + IGS++GEFL+ D  K    WG  +R++V LDIS PL+R   L+  G E+ CWV + YERLPDFC+ CG +GH+ +EC E   
Subjt:  MRIINLPMGFRNECVARKIGSILGEFLDWDSNKQYTSWGNSIRIKVRLDISKPLRRGLMLESDGVEDNCWVTIRYERLPDFCFGCGRIGHAAKECQEIED

Query:  MEEARRYNLEYGAWLKFQGFS
        +  A    L YGAWL+  GFS
Subjt:  MEEARRYNLEYGAWLKFQGFS

TrEMBL top hitse value%identityAlignment
A0A2Z6NZV1 Uncharacterized protein3.0e-2236.02Show/hide
Query:  MRIINLPMGFRNECVARKIGSILGEFLDWDSNKQYTSWGNSIRIKVRLDISKPLRRGLMLESDGVEDNCWVTIRYERLPDFCFGCGRIGHAAKECQEIED
        +R+ +LP   R+E +A+K+G+I+G F + D  K     G  +R+K  LD+ KPL+RG  ++    + N WV  +YERLP+FCF CG+IGH  KEC+++ED
Subjt:  MRIINLPMGFRNECVARKIGSILGEFLDWDSNKQYTSWGNSIRIKVRLDISKPLRRGLMLESDGVEDNCWVTIRYERLPDFCFGCGRIGHAAKECQEIED

Query:  MEEARRYNL-----EYGAWLKFQGFSRLFTKLDIPPDKERKDSEPNMTSKDAGNEMSKGEG
        ++E    ++      YG WL+     R+F       ++ RKD+     SK+     S+ +G
Subjt:  MEEARRYNL-----EYGAWLKFQGFSRLFTKLDIPPDKERKDSEPNMTSKDAGNEMSKGEG

A0A6J1BSZ1 uncharacterized protein LOC1110054813.0e-2240.34Show/hide
Query:  MRIINLPMGFRNECVARKIGSILGEFLDWDSNKQYTSWGNSIRIKVRLDISKPLRRGLMLESDGVEDNCWVTIRYERLPDFCFGCGRIGHAAKECQEIED
        +   +L +   N+ +A ++G+ +G F D +SN     WG+ +R++VR D+ KPL RG+ L  DG    CW+ I+YERLPDF + CGR+ H  K+C +   
Subjt:  MRIINLPMGFRNECVARKIGSILGEFLDWDSNKQYTSWGNSIRIKVRLDISKPLRRGLMLESDGVEDNCWVTIRYERLPDFCFGCGRIGHAAKECQEIED

Query:  MEEARRYNLEYGAWLKFQG
          ++   NL+YG WL+FQG
Subjt:  MEEARRYNLEYGAWLKFQG

A0A6J1DU55 uncharacterized protein LOC1110231355.9e-2640.38Show/hide
Query:  MRIINLPMGFRNECVARKIGSILGEFLDWDSNKQYTSWGNSIRIKVRLDISKPLRRGLMLESDGVEDNCWVTIRYERLPDFCFGCGRIGHAAKECQ-EIE
        + + +LPM + N+ +A ++G+ +G F+D D N++  SWG S+RI+V +DI+KPLRRG+ +  DG    CW+ I+YERLPDFC+ CG IGH++ +C     
Subjt:  MRIINLPMGFRNECVARKIGSILGEFLDWDSNKQYTSWGNSIRIKVRLDISKPLRRGLMLESDGVEDNCWVTIRYERLPDFCFGCGRIGHAAKECQ-EIE

Query:  DMEEARRYNLEYGAWLKFQGFSRLFTKLDIPPDKERKDS--EPNMTSKDAGNEMSK
          ++  R   EYG WL+F G      K        R+DS    +M SK+ G E +K
Subjt:  DMEEARRYNLEYGAWLKFQGFSRLFTKLDIPPDKERKDS--EPNMTSKDAGNEMSK

A0A6P9EH14 uncharacterized protein LOC1089842005.1e-2247.93Show/hide
Query:  MRIINLPMGFRNECVARKIGSILGEFLDWDSNKQYTSWGNSIRIKVRLDISKPLRRGLMLESDGVEDNCWVTIRYERLPDFCFGCGRIGHAAKECQEIED
        +RI +LP+  RN  V + IGS++GEFL+ D  K    WG  +R++V LDIS PL+R   L+  G E+ CWV + YERLPDFC+ CG +GH+ +EC E   
Subjt:  MRIINLPMGFRNECVARKIGSILGEFLDWDSNKQYTSWGNSIRIKVRLDISKPLRRGLMLESDGVEDNCWVTIRYERLPDFCFGCGRIGHAAKECQEIED

Query:  MEEARRYNLEYGAWLKFQGFS
        +  A    L YGAWL+  GFS
Subjt:  MEEARRYNLEYGAWLKFQGFS

A0A803PZC2 Uncharacterized protein2.0e-2141.88Show/hide
Query:  MRIINLPMGFRNECVARKIGSILGEFLDWDSNKQYTSWGNSIRIKVRLDISKPLRRGLMLESDGVEDNCWVTIRYERLPDFCFGCGRIGHAAKECQE-IE
        +++  LP   +++ +A  +G+I+GEFLD         WG  +RI+VRL I KPL RG M+    ++D+ W+  RYERLP+FCF CGR+GH  ++C   +E
Subjt:  MRIINLPMGFRNECVARKIGSILGEFLDWDSNKQYTSWGNSIRIKVRLDISKPLRRGLMLESDGVEDNCWVTIRYERLPDFCFGCGRIGHAAKECQE-IE

Query:  DMEEARRYNLEYGAWLK
         M+     +LEYG W+K
Subjt:  DMEEARRYNLEYGAWLK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G36228.1 nucleic acid binding;zinc ion binding2.2e-0926.67Show/hide
Query:  MRIINLPMGFRNECVARKIGSILGEFLDWDSNKQYTSWGNSIRIKVRLDISKPLR--RGLMLESDGVEDNCWVTIRYERLPDFCFGCGRIGHAAKECQEI
        + I  +P+ + +E     I S LGE +  D N++ TS    IR+KVR+D ++PLR  R +   S    +   +   YE+L   C  C R+ H    C  +
Subjt:  MRIINLPMGFRNECVARKIGSILGEFLDWDSNKQYTSWGNSIRIKVRLDISKPLR--RGLMLESDGVEDNCWVTIRYERLPDFCFGCGRIGHAAKECQEI

Query:  EDMEEARRYNLEYGAWLKFQGFSRLFTKLDIPPDKERKDSEPNMTSKDAG
           EE                   +  + D+    ER D E ++  +D G
Subjt:  EDMEEARRYNLEYGAWLKFQGFSRLFTKLDIPPDKERKDSEPNMTSKDAG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGAATAATAAACCTTCCAATGGGCTTTCGGAATGAATGTGTGGCAAGGAAGATTGGTAGCATCCTGGGAGAATTTTTGGACTGGGATAGCAATAAGCAATACACGTC
TTGGGGAAACAGCATAAGAATTAAAGTAAGATTGGACATTTCAAAACCCCTTCGTAGGGGCCTTATGTTAGAGTCAGATGGGGTGGAAGATAACTGCTGGGTGACAATCA
GATACGAGCGATTACCAGACTTTTGTTTTGGTTGTGGAAGGATAGGACACGCAGCCAAAGAGTGCCAAGAAATAGAGGATATGGAGGAGGCAAGAAGATACAACCTGGAG
TATGGTGCCTGGCTAAAATTTCAGGGCTTCTCCAGACTTTTCACGAAACTAGACATTCCACCTGATAAAGAAAGAAAGGACAGTGAACCAAATATGACTTCAAAAGATGC
TGGGAACGAGATGTCAAAAGGGGAAGGTCTCAATGTAGATTTGAATCATGAAAGCCCTATATTTGGGGAGTCTATGGAATTCGAAATCAGAAGCAAGAGTTTAGGAGACA
ATGCCAATGATTTGGATATTATCAGAATAAATGAAAATGGTGGAGTCTGGACTACTGATATTAATGAAACAAGCAAAAAAGAAGAGGATTTTCTAAGAAGTGATCATGAA
GAGGTCCCAGAAGGCTCAAGCAATACATCATCAAAAATGGATAGTAGCCCGAATAAAGAGGACAGGATTCTAAAGAAACCAAGTTGGAAAAGGAGGCCAAGACAAGATCT
ATCAGGAAGTTCAGAATTGGGCAAATCATGCAGACAGAAGAGAAAGAGCAATTCACTTAGTGGGACATCAAATGAAGAAAATTCAAGGAAGAAAAGTAGAGATGGGGAAG
CTGAAGATATAGACAGGGGTGTAGAGTTTGAAATGTTGGCAGTGGCTGTAGAACAGCCCTGCCTTCAGCCATGA
mRNA sequenceShow/hide mRNA sequence
ATGAGAATAATAAACCTTCCAATGGGCTTTCGGAATGAATGTGTGGCAAGGAAGATTGGTAGCATCCTGGGAGAATTTTTGGACTGGGATAGCAATAAGCAATACACGTC
TTGGGGAAACAGCATAAGAATTAAAGTAAGATTGGACATTTCAAAACCCCTTCGTAGGGGCCTTATGTTAGAGTCAGATGGGGTGGAAGATAACTGCTGGGTGACAATCA
GATACGAGCGATTACCAGACTTTTGTTTTGGTTGTGGAAGGATAGGACACGCAGCCAAAGAGTGCCAAGAAATAGAGGATATGGAGGAGGCAAGAAGATACAACCTGGAG
TATGGTGCCTGGCTAAAATTTCAGGGCTTCTCCAGACTTTTCACGAAACTAGACATTCCACCTGATAAAGAAAGAAAGGACAGTGAACCAAATATGACTTCAAAAGATGC
TGGGAACGAGATGTCAAAAGGGGAAGGTCTCAATGTAGATTTGAATCATGAAAGCCCTATATTTGGGGAGTCTATGGAATTCGAAATCAGAAGCAAGAGTTTAGGAGACA
ATGCCAATGATTTGGATATTATCAGAATAAATGAAAATGGTGGAGTCTGGACTACTGATATTAATGAAACAAGCAAAAAAGAAGAGGATTTTCTAAGAAGTGATCATGAA
GAGGTCCCAGAAGGCTCAAGCAATACATCATCAAAAATGGATAGTAGCCCGAATAAAGAGGACAGGATTCTAAAGAAACCAAGTTGGAAAAGGAGGCCAAGACAAGATCT
ATCAGGAAGTTCAGAATTGGGCAAATCATGCAGACAGAAGAGAAAGAGCAATTCACTTAGTGGGACATCAAATGAAGAAAATTCAAGGAAGAAAAGTAGAGATGGGGAAG
CTGAAGATATAGACAGGGGTGTAGAGTTTGAAATGTTGGCAGTGGCTGTAGAACAGCCCTGCCTTCAGCCATGA
Protein sequenceShow/hide protein sequence
MRIINLPMGFRNECVARKIGSILGEFLDWDSNKQYTSWGNSIRIKVRLDISKPLRRGLMLESDGVEDNCWVTIRYERLPDFCFGCGRIGHAAKECQEIEDMEEARRYNLE
YGAWLKFQGFSRLFTKLDIPPDKERKDSEPNMTSKDAGNEMSKGEGLNVDLNHESPIFGESMEFEIRSKSLGDNANDLDIIRINENGGVWTTDINETSKKEEDFLRSDHE
EVPEGSSNTSSKMDSSPNKEDRILKKPSWKRRPRQDLSGSSELGKSCRQKRKSNSLSGTSNEENSRKKSRDGEAEDIDRGVEFEMLAVAVEQPCLQP