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Lag0032254 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0032254
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRT_RNaseH_2 domain-containing protein
Genome locationchr11:28629657..28630370
RNA-Seq ExpressionLag0032254
SyntenyLag0032254
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
EXB53755.1 hypothetical protein L484_022412 [Morus notabilis]1.4e-0638.54Show/hide
Query:  PRFLMTGIANHGWSQLCAKSKLVNSNIVREFYANIYDQEGFQAIVRGVPVDWSPGAINSLFNLKDF--SHTDFNEMVVAPSNDQLNVVVREVGIEG
        P F+   I  HGW Q C         +VREFYAN+ D       V+ V V ++  AINS+F L++    + DF   V   +++QL VV+ EV IEG
Subjt:  PRFLMTGIANHGWSQLCAKSKLVNSNIVREFYANIYDQEGFQAIVRGVPVDWSPGAINSLFNLKDF--SHTDFNEMVVAPSNDQLNVVVREVGIEG

PON46472.1 hypothetical protein PanWU01x14_251180, partial [Parasponia andersonii]4.2e-0640Show/hide
Query:  AEAAKYVEMLR-RDFLFERGF--DN-----DLPRFLMTGIANHGWSQLCAKSKLVNSNIVREFYANIYDQEGFQAIVRGVPVDWSPGAINSLFNLKD--F
        A A +Y   ++ R    E+GF  DN      LP F+   I  H W Q CA  +     +VREFYAN+ D E     VRGV V WS  AIN++F L D   
Subjt:  AEAAKYVEMLR-RDFLFERGF--DN-----DLPRFLMTGIANHGWSQLCAKSKLVNSNIVREFYANIYDQEGFQAIVRGVPVDWSPGAINSLFNLKD--F

Query:  SHTDF
         H++F
Subjt:  SHTDF

PON65868.1 hypothetical protein PanWU01x14_113570 [Parasponia andersonii]1.6e-0534.09Show/hide
Query:  KGKCIAEAAKYVEMLR-RDFLFERGF--DN----DLPRFLMTGIANHGWSQLCAKSKLVNSNIVREFYANIYDQEGFQAIVRGVPVDWSPGAINSLFNLK
        K K  A   +Y E ++ R    E+GF  DN    + P F+   I  H W   CA  +     +VREFYAN+ + +     VRGV V  S  AIN+++ L 
Subjt:  KGKCIAEAAKYVEMLR-RDFLFERGF--DN----DLPRFLMTGIANHGWSQLCAKSKLVNSNIVREFYANIYDQEGFQAIVRGVPVDWSPGAINSLFNLK

Query:  D--FSHTDFNEMVVAPSNDQLNVVVREVGIEG
        D    H++F E +  P   +L  V+  V I G
Subjt:  D--FSHTDFNEMVVAPSNDQLNVVVREVGIEG

PON90635.1 hypothetical protein TorRG33x02_134920 [Trema orientale]5.5e-0635.16Show/hide
Query:  AEAAKYVEMLRRDFL-FERGF---DND---LPRFLMTGIANHGWSQLCAKSKLVNSNIVREFYANIYDQEGFQAIVRGVPVDWSPGAINSLFNLKD--FS
        A  A+Y E ++   L  E+GF   +N+    P F+   I  H W   CA  +     +VREFYAN+ D E     V+GV V WS  AIN+LF L D    
Subjt:  AEAAKYVEMLRRDFL-FERGF---DND---LPRFLMTGIANHGWSQLCAKSKLVNSNIVREFYANIYDQEGFQAIVRGVPVDWSPGAINSLFNLKD--FS

Query:  HTDFNEMVVAPSNDQLNVVVREVGIEGL
        H+ F E V   +  +L +V+  +   G+
Subjt:  HTDFNEMVVAPSNDQLNVVVREVGIEGL

XP_017248025.1 PREDICTED: uncharacterized protein LOC108219212 [Daucus carota subsp. sativus]9.3e-0632.2Show/hide
Query:  KYVEMLRRDFLFERGFDNDLPRF----LMTGIANHGWSQLCAKSKLVNSNIVREFYANIYDQEGFQAIVRGVPVDWSPGAINSLFNLKDFSHTDFNEMVV
        +++ ++ +    ERGF   LP      LM  I   GW  LC   + V  +IVREFYAN   ++   AIVRG+ VD++  AI  L  +++   T+ + +  
Subjt:  KYVEMLRRDFLFERGFDNDLPRF----LMTGIANHGWSQLCAKSKLVNSNIVREFYANIYDQEGFQAIVRGVPVDWSPGAINSLFNLKDFSHTDFNEMVV

Query:  APSNDQLNVVVREVGIEG
           N  L+ +V E+ + G
Subjt:  APSNDQLNVVVREVGIEG

TrEMBL top hitse value%identityAlignment
A0A2P5BCG4 Uncharacterized protein (Fragment)2.0e-0640Show/hide
Query:  AEAAKYVEMLR-RDFLFERGF--DN-----DLPRFLMTGIANHGWSQLCAKSKLVNSNIVREFYANIYDQEGFQAIVRGVPVDWSPGAINSLFNLKD--F
        A A +Y   ++ R    E+GF  DN      LP F+   I  H W Q CA  +     +VREFYAN+ D E     VRGV V WS  AIN++F L D   
Subjt:  AEAAKYVEMLR-RDFLFERGF--DN-----DLPRFLMTGIANHGWSQLCAKSKLVNSNIVREFYANIYDQEGFQAIVRGVPVDWSPGAINSLFNLKD--F

Query:  SHTDF
         H++F
Subjt:  SHTDF

A0A2P5CXV1 Uncharacterized protein7.7e-0634.09Show/hide
Query:  KGKCIAEAAKYVEMLR-RDFLFERGF--DN----DLPRFLMTGIANHGWSQLCAKSKLVNSNIVREFYANIYDQEGFQAIVRGVPVDWSPGAINSLFNLK
        K K  A   +Y E ++ R    E+GF  DN    + P F+   I  H W   CA  +     +VREFYAN+ + +     VRGV V  S  AIN+++ L 
Subjt:  KGKCIAEAAKYVEMLR-RDFLFERGF--DN----DLPRFLMTGIANHGWSQLCAKSKLVNSNIVREFYANIYDQEGFQAIVRGVPVDWSPGAINSLFNLK

Query:  D--FSHTDFNEMVVAPSNDQLNVVVREVGIEG
        D    H++F E +  P   +L  V+  V I G
Subjt:  D--FSHTDFNEMVVAPSNDQLNVVVREVGIEG

A0A2P5DAQ2 Uncharacterized protein1.7e-0530.63Show/hide
Query:  LRRDFLFERGFDNDLPRFLMTGIANHGWSQLCAKSKLVNSNIVREFYANIYDQEGFQAIVRGVPVDWSPGAINSLFNLKD--FSHTDFNEMVVAPSNDQL
        + ++F+++     + P F+   I  H W   CA  +     +VREFY N+ + +     +RGV V  S  AIN++F+L D    H++F E +  P   +L
Subjt:  LRRDFLFERGFDNDLPRFLMTGIANHGWSQLCAKSKLVNSNIVREFYANIYDQEGFQAIVRGVPVDWSPGAINSLFNLKD--FSHTDFNEMVVAPSNDQL

Query:  NVVVREVGIEG
         +V+  V I G
Subjt:  NVVVREVGIEG

A0A2P5EYL5 Uncharacterized protein2.6e-0635.16Show/hide
Query:  AEAAKYVEMLRRDFL-FERGF---DND---LPRFLMTGIANHGWSQLCAKSKLVNSNIVREFYANIYDQEGFQAIVRGVPVDWSPGAINSLFNLKD--FS
        A  A+Y E ++   L  E+GF   +N+    P F+   I  H W   CA  +     +VREFYAN+ D E     V+GV V WS  AIN+LF L D    
Subjt:  AEAAKYVEMLRRDFL-FERGF---DND---LPRFLMTGIANHGWSQLCAKSKLVNSNIVREFYANIYDQEGFQAIVRGVPVDWSPGAINSLFNLKD--FS

Query:  HTDFNEMVVAPSNDQLNVVVREVGIEGL
        H+ F E V   +  +L +V+  +   G+
Subjt:  HTDFNEMVVAPSNDQLNVVVREVGIEGL

W9QTD9 Uncharacterized protein7.0e-0738.54Show/hide
Query:  PRFLMTGIANHGWSQLCAKSKLVNSNIVREFYANIYDQEGFQAIVRGVPVDWSPGAINSLFNLKDF--SHTDFNEMVVAPSNDQLNVVVREVGIEG
        P F+   I  HGW Q C         +VREFYAN+ D       V+ V V ++  AINS+F L++    + DF   V   +++QL VV+ EV IEG
Subjt:  PRFLMTGIANHGWSQLCAKSKLVNSNIVREFYANIYDQEGFQAIVRGVPVDWSPGAINSLFNLKDF--SHTDFNEMVVAPSNDQLNVVVREVGIEG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCAGAGGTACCCCGTCGTCCTCGTCGCCGTCAGAATCAGAAAGTCGACCGTGTGAAGGTGGTTCAGACTGATACTCCTTCGCCGCGGACAACTGATTATGAGAAAGA
GAATGCAGAGAGAAAAGAACATGAGAAAAAGAAGGCCGAAGACAAAGAAAGAGAGGAAACAGAGAAAAAAGCAGAAGAAGAAATTTTACCCAAACAAAGGGAAGACAAGG
GCAAATGTATTGCTGAAGCAGCAAAGTATGTCGAGATGCTAAGAAGAGACTTTTTGTTTGAACGAGGATTCGACAATGATCTGCCACGATTCTTGATGACTGGAATAGCG
AACCATGGCTGGAGTCAATTATGTGCAAAGTCGAAGCTGGTCAATTCCAACATTGTTCGAGAGTTTTATGCAAATATTTATGATCAAGAGGGATTTCAGGCTATCGTCCG
AGGAGTGCCCGTTGATTGGAGCCCAGGGGCTATCAATTCGTTATTCAACCTCAAGGATTTTTCGCACACAGACTTCAATGAGATGGTGGTGGCACCATCAAATGATCAAT
TAAATGTGGTTGTCCGAGAAGTTGGCATCGAGGGGCTCAGTGGAGACTGTCGAAGACAGAAAGGCGCACGTTTCAAGCTACTTATCTAA
mRNA sequenceShow/hide mRNA sequence
ATGCCAGAGGTACCCCGTCGTCCTCGTCGCCGTCAGAATCAGAAAGTCGACCGTGTGAAGGTGGTTCAGACTGATACTCCTTCGCCGCGGACAACTGATTATGAGAAAGA
GAATGCAGAGAGAAAAGAACATGAGAAAAAGAAGGCCGAAGACAAAGAAAGAGAGGAAACAGAGAAAAAAGCAGAAGAAGAAATTTTACCCAAACAAAGGGAAGACAAGG
GCAAATGTATTGCTGAAGCAGCAAAGTATGTCGAGATGCTAAGAAGAGACTTTTTGTTTGAACGAGGATTCGACAATGATCTGCCACGATTCTTGATGACTGGAATAGCG
AACCATGGCTGGAGTCAATTATGTGCAAAGTCGAAGCTGGTCAATTCCAACATTGTTCGAGAGTTTTATGCAAATATTTATGATCAAGAGGGATTTCAGGCTATCGTCCG
AGGAGTGCCCGTTGATTGGAGCCCAGGGGCTATCAATTCGTTATTCAACCTCAAGGATTTTTCGCACACAGACTTCAATGAGATGGTGGTGGCACCATCAAATGATCAAT
TAAATGTGGTTGTCCGAGAAGTTGGCATCGAGGGGCTCAGTGGAGACTGTCGAAGACAGAAAGGCGCACGTTTCAAGCTACTTATCTAA
Protein sequenceShow/hide protein sequence
MPEVPRRPRRRQNQKVDRVKVVQTDTPSPRTTDYEKENAERKEHEKKKAEDKEREETEKKAEEEILPKQREDKGKCIAEAAKYVEMLRRDFLFERGFDNDLPRFLMTGIA
NHGWSQLCAKSKLVNSNIVREFYANIYDQEGFQAIVRGVPVDWSPGAINSLFNLKDFSHTDFNEMVVAPSNDQLNVVVREVGIEGLSGDCRRQKGARFKLLI