CuGenDBv2

Gene ID	Lag0032260
Organism	Luffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Description	rho GDP-dissociation inhibitor 1-like
Genome location	chr11:28924962..28925611
RNA-Seq Expression	Lag0032260
Synteny	Lag0032260
Gene Ontology terms	GO:0005737 - cytoplasm (cellular component) GO:0005094 - Rho GDP-dissociation inhibitor activity (molecular function)
InterPro domains	IPR000406 - Rho protein GDP-dissociation inhibitor

Homology

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GenBank top hits

e value

%identity

Alignment

KAE8652873.1 hypothetical protein Csa_013012 [Cucumis sativus]

2.0e-13

59.3

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Query:  ELEEEENERKIELGPQYTLKELIEKDK--------------------------PDEKIVSLAIKSSRRPDIVLPVPESGNPKGLWF
        E E++E+ RKIELGPQYTLKEL EKDK                          PD KI+SLAIKSS RPDIVLPVPESGNPKGLWF
Subjt:  ELEEEENERKIELGPQYTLKELIEKDK--------------------------PDEKIVSLAIKSSRRPDIVLPVPESGNPKGLWF

XP_004139545.1 rho GDP-dissociation inhibitor 1 [Cucumis sativus]

2.0e-13

59.3

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Query:  ELEEEENERKIELGPQYTLKELIEKDK--------------------------PDEKIVSLAIKSSRRPDIVLPVPESGNPKGLWF
        E E++E+ RKIELGPQYTLKEL EKDK                          PD KI+SLAIKSS RPDIVLPVPESGNPKGLWF
Subjt:  ELEEEENERKIELGPQYTLKELIEKDK--------------------------PDEKIVSLAIKSSRRPDIVLPVPESGNPKGLWF

XP_008458949.1 PREDICTED: rho GDP-dissociation inhibitor 1-like [Cucumis melo]

2.0e-13

59.3

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Query:  ELEEEENERKIELGPQYTLKELIEKDK--------------------------PDEKIVSLAIKSSRRPDIVLPVPESGNPKGLWF
        E E++E+ RKIELGPQYTLKEL EKDK                          PD KI+SLAIKSS RPDIVLPVPESGNPKGLWF
Subjt:  ELEEEENERKIELGPQYTLKELIEKDK--------------------------PDEKIVSLAIKSSRRPDIVLPVPESGNPKGLWF

XP_022142383.1 rho GDP-dissociation inhibitor 1-like [Momordica charantia]

9.2e-14

60.47

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Query:  ELEEEENERKIELGPQYTLKELIEKDK--------------------------PDEKIVSLAIKSSRRPDIVLPVPESGNPKGLWF
        E E++E+ RKIELGPQYTLKEL EKDK                          PD KIVSLAIKSS RPDIVLPVPESGNPKGLWF
Subjt:  ELEEEENERKIELGPQYTLKELIEKDK--------------------------PDEKIVSLAIKSSRRPDIVLPVPESGNPKGLWF

XP_038893727.1 rho GDP-dissociation inhibitor 1-like [Benincasa hispida]

2.0e-13

59.3

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Query:  ELEEEENERKIELGPQYTLKELIEKDK--------------------------PDEKIVSLAIKSSRRPDIVLPVPESGNPKGLWF
        E E++E+ RKIELGPQYTLKEL EKDK                          PD KI+SLAIKSS RPDIVLPVPESGNPKGLWF
Subjt:  ELEEEENERKIELGPQYTLKELIEKDK--------------------------PDEKIVSLAIKSSRRPDIVLPVPESGNPKGLWF

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LYM9 Uncharacterized protein

9.0e-15

66.23

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Query:  ELEEEENERKIELGPQYTLKELIEKDK-----------------PDEKIVSLAIKSSRRPDIVLPVPESGNPKGLWF
        E E++E+ RKIELGPQYTLKEL EKDK                 PD KI+SLAIKSS RPDIVLPVPESGNPKGLWF
Subjt:  ELEEEENERKIELGPQYTLKELIEKDK-----------------PDEKIVSLAIKSSRRPDIVLPVPESGNPKGLWF

A0A1S3CA99 rho GDP-dissociation inhibitor 1-like

9.9e-14

59.3

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Query:  ELEEEENERKIELGPQYTLKELIEKDK--------------------------PDEKIVSLAIKSSRRPDIVLPVPESGNPKGLWF
        E E++E+ RKIELGPQYTLKEL EKDK                          PD KI+SLAIKSS RPDIVLPVPESGNPKGLWF
Subjt:  ELEEEENERKIELGPQYTLKELIEKDK--------------------------PDEKIVSLAIKSSRRPDIVLPVPESGNPKGLWF

A0A5A7UGQ5 Rho GDP-dissociation inhibitor 1-like

9.9e-14

59.3

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Query:  ELEEEENERKIELGPQYTLKELIEKDK--------------------------PDEKIVSLAIKSSRRPDIVLPVPESGNPKGLWF
        E E++E+ RKIELGPQYTLKEL EKDK                          PD KI+SLAIKSS RPDIVLPVPESGNPKGLWF
Subjt:  ELEEEENERKIELGPQYTLKELIEKDK--------------------------PDEKIVSLAIKSSRRPDIVLPVPESGNPKGLWF

A0A6J1CN50 rho GDP-dissociation inhibitor 1-like

4.5e-14

60.47

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Query:  ELEEEENERKIELGPQYTLKELIEKDK--------------------------PDEKIVSLAIKSSRRPDIVLPVPESGNPKGLWF
        E E++E+ RKIELGPQYTLKEL EKDK                          PD KIVSLAIKSS RPDIVLPVPESGNPKGLWF
Subjt:  ELEEEENERKIELGPQYTLKELIEKDK--------------------------PDEKIVSLAIKSSRRPDIVLPVPESGNPKGLWF

A0A6J1IFW0 rho GDP-dissociation inhibitor 1-like

1.7e-13

58.14

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Query:  ELEEEENERKIELGPQYTLKELIEKDK--------------------------PDEKIVSLAIKSSRRPDIVLPVPESGNPKGLWF
        E +++E  RKIELGPQYTLKEL EKDK                          PD KIVSLAIKS+ RPDIVLPVPESGNPKGLWF
Subjt:  ELEEEENERKIELGPQYTLKELIEKDK--------------------------PDEKIVSLAIKSSRRPDIVLPVPESGNPKGLWF

SwissProt top hits

e value

%identity

Alignment

Q9SFC6 Rho GDP-dissociation inhibitor 1

4.4e-11

47.62

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Query:  EEEENERKIELGPQYTLKELIEKDKPDE--------------------------KIVSLAIKSSRRPDIVLPVPESGNPKGLWF
        EEE+++ K++LGPQYT+KE +EKDK DE                          +I SLAI S  RPDIVL VPE+GNPKG+WF
Subjt:  EEEENERKIELGPQYTLKELIEKDKPDE--------------------------KIVSLAIKSSRRPDIVLPVPESGNPKGLWF

Arabidopsis top hits

e value

%identity

Alignment

AT1G12070.1 Immunoglobulin E-set superfamily protein

1.0e-07

39.53

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Query:  EEEENERKIELGPQYTLKELIEKDKPDE--------------------------KIVSLAIKSSRRPDIVLPVPESGNP--KGLWF
        +EEE ++K+ELGP   LKE +EKDK DE                          KI++L I+S  R D+VL +PE+G P  KG WF
Subjt:  EEEENERKIELGPQYTLKELIEKDKPDE--------------------------KIVSLAIKSSRRPDIVLPVPESGNP--KGLWF

AT1G62450.1 Immunoglobulin E-set superfamily protein

1.2e-06

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Query:  KNSGVRPMKEEKELEEEENERKIELGPQYTLKELIEKDKPDE--------------------------KIVSLAIKSSRRPDIVLPVPESG--NPKGLWF
        KNSG        E +EE+ ++K+ELGP   LKE +E+DK DE                          KI+ L I+S  R ++VL +PE G  NPKG WF
Subjt:  KNSGVRPMKEEKELEEEENERKIELGPQYTLKELIEKDKPDE--------------------------KIVSLAIKSSRRPDIVLPVPESG--NPKGLWF

AT3G07880.1 Immunoglobulin E-set superfamily protein

3.2e-12

47.62

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Query:  EEEENERKIELGPQYTLKELIEKDKPDE--------------------------KIVSLAIKSSRRPDIVLPVPESGNPKGLWF
        EEE+++ K++LGPQYT+KE +EKDK DE                          +I SLAI S  RPDIVL VPE+GNPKG+WF
Subjt:  EEEENERKIELGPQYTLKELIEKDKPDE--------------------------KIVSLAIKSSRRPDIVLPVPESGNPKGLWF

Sequences

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CDS sequence

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ATGCTCCTCTCTCCTCCTCTGAAACCCCAACACCCCTCTCTCTCTTCTTCTTCCCAAGCCAACAACCCTCCCTCCCTCTGTTTCTTGGGCAGATGGGTCCGTGAAAAGAA
TCGTGAAAAAAATTCTGGGGTTCGGCCAATGAAGGAGGAGAAAGAGTTAGAGGAGGAGGAAAATGAAAGGAAAATCGAATTGGGTCCTCAGTACACTTTGAAAGAACTCA
TCGAGAAGGACAAGCCGGATGAGAAGATTGTGAGCCTTGCAATCAAATCATCACGCCGGCCTGACATTGTTCTTCCAGTTCCTGAAAGTGGAAATCCCAAAGGCCTTTGG
TTTAGGGAGATGGGAGAGGAGAGAGATTTTTTGGGTGGGTAA

mRNA sequence

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Protein sequence

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MLLSPPLKPQHPSLSSSSQANNPPSLCFLGRWVREKNREKNSGVRPMKEEKELEEEENERKIELGPQYTLKELIEKDKPDEKIVSLAIKSSRRPDIVLPVPESGNPKGLW
FREMGEERDFLGG

Lag0032260 (gene) of Sponge gourd (AG-4) v1 genome