; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0032264 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0032264
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionUnknown protein
Genome locationchr11:29142114..29148631
RNA-Seq ExpressionLag0032264
SyntenyLag0032264
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0058519.1 putative RING-H2 finger protein ATL71 [Cucumis melo var. makuwa]1.4e-0540Show/hide
Query:  SDLTYSKEMTPLFNNVSQSMSQAYMPYLAIIYTAFGNSYGCCESQCKETGTDAPTVVRLEVTSQPLCLL-----PCKLETINSDSMVDRAMHVCFADFHD
        SD T SKEM P F                            CES C +TGTD P       TS    L+     P     INSDS+VD A+ VCFADF D
Subjt:  SDLTYSKEMTPLFNNVSQSMSQAYMPYLAIIYTAFGNSYGCCESQCKETGTDAPTVVRLEVTSQPLCLL-----PCKLETINSDSMVDRAMHVCFADFHD

Query:  IAPPP
        IAPPP
Subjt:  IAPPP
TrEMBL top hitse value%identityAlignment
A0A5D3C5U3 Putative RING-H2 finger protein ATL716.7e-0640Show/hide
Query:  SDLTYSKEMTPLFNNVSQSMSQAYMPYLAIIYTAFGNSYGCCESQCKETGTDAPTVVRLEVTSQPLCLL-----PCKLETINSDSMVDRAMHVCFADFHD
        SD T SKEM P F                            CES C +TGTD P       TS    L+     P     INSDS+VD A+ VCFADF D
Subjt:  SDLTYSKEMTPLFNNVSQSMSQAYMPYLAIIYTAFGNSYGCCESQCKETGTDAPTVVRLEVTSQPLCLL-----PCKLETINSDSMVDRAMHVCFADFHD

Query:  IAPPP
        IAPPP
Subjt:  IAPPP
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATTCTAAGAAGCTCTTCACAAGAATTGGAGTTTTGTTGCTTCTTGTGTTCCTCTTGGGTACTAGTGTCTCTGCGAAAAGGCCTTTGGTTGCAGTTCCTAATGGTGA
TATTGGCGTTAAGAAAGCAAACATTGATCCACAATGGTCATGGGATGATAGTCCATGGGAAAATGGAGGGTCAGGATCTACTTATCCACCTGGCACTGTGTATTTGATGT
TTCTGGTTTTTAATTTGACATTGTTGGGTGAAGTAAGTGCTGAGGATATTGAAGGTCATTCTCAAGAATTCATTTTGGATCTGTTAAGAAATGTGTCTTGTGTGGAGACA
AAACTTGAAGACTTCACCCTAACCTCTTGGAGCACAAGTAAGAAGGACTTGGTGTGCAAGGAAGAAACTCACCAAACTTGGTGTGCAAGGAGGAAACTCACCACCTTGGT
GTACAAGGAAGAAGGAAGGGTGGAGCCTTCGCCATTAAGGCTCATTGCATATATATGCTTTTATAGGGAGAAGCAGCCAACGGTCAACACTCATGGAGTGCCACGTGTCA
ACCGTCAGCCATGGAGAACCAAAAGTGTGGTCAAGCAGGCGCGTTCCGGACGTGACAAGCGCGCGGCACCGGCCTTTGGTGAGAGGATCTGCCAAATTCCTTCAGACCTC
ACATACTCCAAGGAGATGACTCCACTTTTCAACAATGTTTCACAATCCATGTCTCAGGCGTATATGCCTTATCTTGCCATTATATACACTGCTTTTGGCAATTCCTATGG
CTGTTGTGAATCACAGTGCAAGGAGACTGGAACAGACGCCCCCACTGTGGTACGTCTTGAAGTAACTTCTCAACCACTCTGCCTCTTGCCCTGCAAGCTCGAGACTATAA
ACTCTGACTCCATGGTGGATCGTGCAATGCACGTCTGTTTTGCAGACTTCCATGATATAGCTCCTCCACCATAA
mRNA sequenceShow/hide mRNA sequence
ATGGATTCTAAGAAGCTCTTCACAAGAATTGGAGTTTTGTTGCTTCTTGTGTTCCTCTTGGGTACTAGTGTCTCTGCGAAAAGGCCTTTGGTTGCAGTTCCTAATGGTGA
TATTGGCGTTAAGAAAGCAAACATTGATCCACAATGGTCATGGGATGATAGTCCATGGGAAAATGGAGGGTCAGGATCTACTTATCCACCTGGCACTGTGTATTTGATGT
TTCTGGTTTTTAATTTGACATTGTTGGGTGAAGTAAGTGCTGAGGATATTGAAGGTCATTCTCAAGAATTCATTTTGGATCTGTTAAGAAATGTGTCTTGTGTGGAGACA
AAACTTGAAGACTTCACCCTAACCTCTTGGAGCACAAGTAAGAAGGACTTGGTGTGCAAGGAAGAAACTCACCAAACTTGGTGTGCAAGGAGGAAACTCACCACCTTGGT
GTACAAGGAAGAAGGAAGGGTGGAGCCTTCGCCATTAAGGCTCATTGCATATATATGCTTTTATAGGGAGAAGCAGCCAACGGTCAACACTCATGGAGTGCCACGTGTCA
ACCGTCAGCCATGGAGAACCAAAAGTGTGGTCAAGCAGGCGCGTTCCGGACGTGACAAGCGCGCGGCACCGGCCTTTGGTGAGAGGATCTGCCAAATTCCTTCAGACCTC
ACATACTCCAAGGAGATGACTCCACTTTTCAACAATGTTTCACAATCCATGTCTCAGGCGTATATGCCTTATCTTGCCATTATATACACTGCTTTTGGCAATTCCTATGG
CTGTTGTGAATCACAGTGCAAGGAGACTGGAACAGACGCCCCCACTGTGGTACGTCTTGAAGTAACTTCTCAACCACTCTGCCTCTTGCCCTGCAAGCTCGAGACTATAA
ACTCTGACTCCATGGTGGATCGTGCAATGCACGTCTGTTTTGCAGACTTCCATGATATAGCTCCTCCACCATAA
Protein sequenceShow/hide protein sequence
MDSKKLFTRIGVLLLLVFLLGTSVSAKRPLVAVPNGDIGVKKANIDPQWSWDDSPWENGGSGSTYPPGTVYLMFLVFNLTLLGEVSAEDIEGHSQEFILDLLRNVSCVET
KLEDFTLTSWSTSKKDLVCKEETHQTWCARRKLTTLVYKEEGRVEPSPLRLIAYICFYREKQPTVNTHGVPRVNRQPWRTKSVVKQARSGRDKRAAPAFGERICQIPSDL
TYSKEMTPLFNNVSQSMSQAYMPYLAIIYTAFGNSYGCCESQCKETGTDAPTVVRLEVTSQPLCLLPCKLETINSDSMVDRAMHVCFADFHDIAPPP