; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0032265 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0032265
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionLINE-1 retrotransposable element ORF2 protein
Genome locationchr11:29163217..29163998
RNA-Seq ExpressionLag0032265
SyntenyLag0032265
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0045262.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]2.2e-2137.5Show/hide
Query:  MNVENLDPLMEATSLFTHLTNDEAYLEVTPWRFTIIASNHSSRIVATLKLSFRFFTTYSIDDQNPHRYRISLQPFYHALSVARNFHSISIHLLPTIHQMT
        + ++N DPL++ATS    ++ D A L+ TP +F IIAS+ S R +ATL+LS ++FTT+S+D  N H  ++SL+ F+ A+    +F S++IHLL   +QM 
Subjt:  MNVENLDPLMEATSLFTHLTNDEAYLEVTPWRFTIIASNHSSRIVATLKLSFRFFTTYSIDDQNPHRYRISLQPFYHALSVARNFHSISIHLLPTIHQMT

Query:  LTFENSTPLGRVPHLQLLQPLVSPPSQGQDG----GNIVYGKYFTIKSKDLIRILSTLPMLGEALGNPMISLYCRFIFIYLEEIGASCSLFVTVCVRVTN
        L F+  TP   +  L     L   P Q +D       +   KYF +KSK L RI+  LP+      N  I                       + V VTN
Subjt:  LTFENSTPLGRVPHLQLLQPLVSPPSQGQDG----GNIVYGKYFTIKSKDLIRILSTLPMLGEALGNPMISLYCRFIFIYLEEIGASCSLFVTVCVRVTN

Query:  SQVKFSVGSHEIILTE
        S+VKFS+ S EIILTE
Subjt:  SQVKFSVGSHEIILTE

XP_008458682.1 PREDICTED: uncharacterized protein LOC103498010 [Cucumis melo]6.1e-2438.25Show/hide
Query:  MNVENLDPLMEATSLFTHLTNDEAYLEVTPWRFTIIASNHSSRIVATLKLSFRFFTTYSIDDQNPHRYRISLQPFYHALSVARNFHSISIHLLPTIHQMT
        + +E  +PL++ATSL   +  D A ++ TP    II SN S + VATL+LS R FT +S+D       ++SLQPF+ A+    +F S++IHLL T +QM 
Subjt:  MNVENLDPLMEATSLFTHLTNDEAYLEVTPWRFTIIASNHSSRIVATLKLSFRFFTTYSIDDQNPHRYRISLQPFYHALSVARNFHSISIHLLPTIHQMT

Query:  LTFENSTPLGRVPHLQLLQPLVSPPSQGQDGGNIVYGKYFTIKSKDLIRILSTLPMLGEALGNPMISLYCRFIFIYLEEIGASCSLFVTVCVRVTNSQVK
        L FE  TP   VP L     L   P Q ++ G + YG +FT+ S++L RI+  LP+  +                             TV V VT SQVK
Subjt:  LTFENSTPLGRVPHLQLLQPLVSPPSQGQDGGNIVYGKYFTIKSKDLIRILSTLPMLGEALGNPMISLYCRFIFIYLEEIGASCSLFVTVCVRVTNSQVK

Query:  FSVGSHEIILTEEVRIC
        FS+ S EIILT+E   C
Subjt:  FSVGSHEIILTEEVRIC

XP_008464344.1 PREDICTED: uncharacterized protein LOC103502250 [Cucumis melo]2.2e-2137.5Show/hide
Query:  MNVENLDPLMEATSLFTHLTNDEAYLEVTPWRFTIIASNHSSRIVATLKLSFRFFTTYSIDDQNPHRYRISLQPFYHALSVARNFHSISIHLLPTIHQMT
        + ++N DPL++ATS    ++ D A L+ TP +F IIAS+ S R +ATL+LS ++FTT+S+D  N H  ++SL+ F+ A+    +F S++IHLL   +QM 
Subjt:  MNVENLDPLMEATSLFTHLTNDEAYLEVTPWRFTIIASNHSSRIVATLKLSFRFFTTYSIDDQNPHRYRISLQPFYHALSVARNFHSISIHLLPTIHQMT

Query:  LTFENSTPLGRVPHLQLLQPLVSPPSQGQDG----GNIVYGKYFTIKSKDLIRILSTLPMLGEALGNPMISLYCRFIFIYLEEIGASCSLFVTVCVRVTN
        L F+  TP   +  L     L   P Q +D       +   KYF +KSK L RI+  LP+      N  I                       + V VTN
Subjt:  LTFENSTPLGRVPHLQLLQPLVSPPSQGQDG----GNIVYGKYFTIKSKDLIRILSTLPMLGEALGNPMISLYCRFIFIYLEEIGASCSLFVTVCVRVTN

Query:  SQVKFSVGSHEIILTE
        S+VKFS+ S EIILTE
Subjt:  SQVKFSVGSHEIILTE

XP_016903187.1 PREDICTED: uncharacterized protein LOC103502263 [Cucumis melo]4.4e-2236.04Show/hide
Query:  MLFMRMNVENLDPLMEATSLFTHLTNDEAYLEVTPWRFTIIASNHSSRIVATLKLSFRFFTTYSIDDQNPHRYRISLQPFYHALSVARNFHSISIHLLPT
        M    + +++ DPL +ATS    +   EA ++ TP  F+IIASN S R VA L+++   F  Y +D  N H  RISL+ F+ AL       S++IHLL  
Subjt:  MLFMRMNVENLDPLMEATSLFTHLTNDEAYLEVTPWRFTIIASNHSSRIVATLKLSFRFFTTYSIDDQNPHRYRISLQPFYHALSVARNFHSISIHLLPT

Query:  IHQMTLTFENSTPLGRVPHLQLLQPLVSPPSQGQDGGNIVYGKYFTIKSKDLIRILSTLPML-GEALGNPMISLYCRFIFIYLEEIGASCSLFVTVCVRV
        I Q+ L FE+S+   +V H      L   PSQ +D G + Y K+F+I SKDL R++  LP+  G+                             ++CV  
Subjt:  IHQMTLTFENSTPLGRVPHLQLLQPLVSPPSQGQDGGNIVYGKYFTIKSKDLIRILSTLPML-GEALGNPMISLYCRFIFIYLEEIGASCSLFVTVCVRV

Query:  TNSQVKFSVGSHEIILTEEVRI
        T SQVKFS+ S EI+LT+E ++
Subjt:  TNSQVKFSVGSHEIILTEEVRI

XP_031743987.1 uncharacterized protein LOC116404759 [Cucumis sativus]2.2e-2136.11Show/hide
Query:  MNVENLDPLMEATSLFTHLTNDEAYLEVTPWRFTIIASNHSSRIVATLKLSFRFFTTYSIDDQNPHRYRISLQPFYHALSVARNFHSISIHLLPTIHQMT
        + + N DPL++ATS F  ++ D+A ++ TP +F II+S+ S R +ATL+LS ++FT++S+D  + H  ++SL+ F+ A+    +F S++IHLL   +Q+ 
Subjt:  MNVENLDPLMEATSLFTHLTNDEAYLEVTPWRFTIIASNHSSRIVATLKLSFRFFTTYSIDDQNPHRYRISLQPFYHALSVARNFHSISIHLLPTIHQMT

Query:  LTFENSTPLGRVPHLQLLQPLVSPPSQGQDG----GNIVYGKYFTIKSKDLIRILSTLPMLGEALGNPMISLYCRFIFIYLEEIGASCSLFVTVCVRVTN
        L F+  TP   +  L     L   P Q +D       +  GKYF +KSK L RI+  LP+      N  I                       VCV VTN
Subjt:  LTFENSTPLGRVPHLQLLQPLVSPPSQGQDG----GNIVYGKYFTIKSKDLIRILSTLPMLGEALGNPMISLYCRFIFIYLEEIGASCSLFVTVCVRVTN

Query:  SQVKFSVGSHEIILTE
        S+VKFS+ S EI+L E
Subjt:  SQVKFSVGSHEIILTE

TrEMBL top hitse value%identityAlignment
A0A0A0K902 Uncharacterized protein2.0e-1737.5Show/hide
Query:  MNVENLDPLMEATSLFTHLTNDEAYLEVTPWRFTIIASNHSSRIVATLKLSFRFFTTYSIDDQNPHRYRISLQPFYHALSVARNFHSISIHLLPTIHQMT
        + + N DPL++ATS F  ++ D+A ++ TP +F II+S+ S R +ATL+LS ++FT++S+D  + H  ++SL+ F+ A+    +F S++IHLL   +Q+ 
Subjt:  MNVENLDPLMEATSLFTHLTNDEAYLEVTPWRFTIIASNHSSRIVATLKLSFRFFTTYSIDDQNPHRYRISLQPFYHALSVARNFHSISIHLLPTIHQMT

Query:  LTFENSTPLGRVPHLQLLQPLVSPPSQGQDG----GNIVYGKYFTIKSKDLIRILSTLPM
        L F+  TP   +  L     L   P Q +D       +  GKYF +KSK L RI+  LP+
Subjt:  LTFENSTPLGRVPHLQLLQPLVSPPSQGQDG----GNIVYGKYFTIKSKDLIRILSTLPM

A0A1S3C8J1 uncharacterized protein LOC1034980102.9e-2438.25Show/hide
Query:  MNVENLDPLMEATSLFTHLTNDEAYLEVTPWRFTIIASNHSSRIVATLKLSFRFFTTYSIDDQNPHRYRISLQPFYHALSVARNFHSISIHLLPTIHQMT
        + +E  +PL++ATSL   +  D A ++ TP    II SN S + VATL+LS R FT +S+D       ++SLQPF+ A+    +F S++IHLL T +QM 
Subjt:  MNVENLDPLMEATSLFTHLTNDEAYLEVTPWRFTIIASNHSSRIVATLKLSFRFFTTYSIDDQNPHRYRISLQPFYHALSVARNFHSISIHLLPTIHQMT

Query:  LTFENSTPLGRVPHLQLLQPLVSPPSQGQDGGNIVYGKYFTIKSKDLIRILSTLPMLGEALGNPMISLYCRFIFIYLEEIGASCSLFVTVCVRVTNSQVK
        L FE  TP   VP L     L   P Q ++ G + YG +FT+ S++L RI+  LP+  +                             TV V VT SQVK
Subjt:  LTFENSTPLGRVPHLQLLQPLVSPPSQGQDGGNIVYGKYFTIKSKDLIRILSTLPMLGEALGNPMISLYCRFIFIYLEEIGASCSLFVTVCVRVTNSQVK

Query:  FSVGSHEIILTEEVRIC
        FS+ S EIILT+E   C
Subjt:  FSVGSHEIILTEEVRIC

A0A1S3CL88 uncharacterized protein LOC1035022501.0e-2137.5Show/hide
Query:  MNVENLDPLMEATSLFTHLTNDEAYLEVTPWRFTIIASNHSSRIVATLKLSFRFFTTYSIDDQNPHRYRISLQPFYHALSVARNFHSISIHLLPTIHQMT
        + ++N DPL++ATS    ++ D A L+ TP +F IIAS+ S R +ATL+LS ++FTT+S+D  N H  ++SL+ F+ A+    +F S++IHLL   +QM 
Subjt:  MNVENLDPLMEATSLFTHLTNDEAYLEVTPWRFTIIASNHSSRIVATLKLSFRFFTTYSIDDQNPHRYRISLQPFYHALSVARNFHSISIHLLPTIHQMT

Query:  LTFENSTPLGRVPHLQLLQPLVSPPSQGQDG----GNIVYGKYFTIKSKDLIRILSTLPMLGEALGNPMISLYCRFIFIYLEEIGASCSLFVTVCVRVTN
        L F+  TP   +  L     L   P Q +D       +   KYF +KSK L RI+  LP+      N  I                       + V VTN
Subjt:  LTFENSTPLGRVPHLQLLQPLVSPPSQGQDG----GNIVYGKYFTIKSKDLIRILSTLPMLGEALGNPMISLYCRFIFIYLEEIGASCSLFVTVCVRVTN

Query:  SQVKFSVGSHEIILTE
        S+VKFS+ S EIILTE
Subjt:  SQVKFSVGSHEIILTE

A0A1S4E4N8 uncharacterized protein LOC1035022632.1e-2236.04Show/hide
Query:  MLFMRMNVENLDPLMEATSLFTHLTNDEAYLEVTPWRFTIIASNHSSRIVATLKLSFRFFTTYSIDDQNPHRYRISLQPFYHALSVARNFHSISIHLLPT
        M    + +++ DPL +ATS    +   EA ++ TP  F+IIASN S R VA L+++   F  Y +D  N H  RISL+ F+ AL       S++IHLL  
Subjt:  MLFMRMNVENLDPLMEATSLFTHLTNDEAYLEVTPWRFTIIASNHSSRIVATLKLSFRFFTTYSIDDQNPHRYRISLQPFYHALSVARNFHSISIHLLPT

Query:  IHQMTLTFENSTPLGRVPHLQLLQPLVSPPSQGQDGGNIVYGKYFTIKSKDLIRILSTLPML-GEALGNPMISLYCRFIFIYLEEIGASCSLFVTVCVRV
        I Q+ L FE+S+   +V H      L   PSQ +D G + Y K+F+I SKDL R++  LP+  G+                             ++CV  
Subjt:  IHQMTLTFENSTPLGRVPHLQLLQPLVSPPSQGQDGGNIVYGKYFTIKSKDLIRILSTLPML-GEALGNPMISLYCRFIFIYLEEIGASCSLFVTVCVRV

Query:  TNSQVKFSVGSHEIILTEEVRI
        T SQVKFS+ S EI+LT+E ++
Subjt:  TNSQVKFSVGSHEIILTEEVRI

A0A5D3DZ07 LINE-1 retrotransposable element ORF2 protein1.0e-2137.5Show/hide
Query:  MNVENLDPLMEATSLFTHLTNDEAYLEVTPWRFTIIASNHSSRIVATLKLSFRFFTTYSIDDQNPHRYRISLQPFYHALSVARNFHSISIHLLPTIHQMT
        + ++N DPL++ATS    ++ D A L+ TP +F IIAS+ S R +ATL+LS ++FTT+S+D  N H  ++SL+ F+ A+    +F S++IHLL   +QM 
Subjt:  MNVENLDPLMEATSLFTHLTNDEAYLEVTPWRFTIIASNHSSRIVATLKLSFRFFTTYSIDDQNPHRYRISLQPFYHALSVARNFHSISIHLLPTIHQMT

Query:  LTFENSTPLGRVPHLQLLQPLVSPPSQGQDG----GNIVYGKYFTIKSKDLIRILSTLPMLGEALGNPMISLYCRFIFIYLEEIGASCSLFVTVCVRVTN
        L F+  TP   +  L     L   P Q +D       +   KYF +KSK L RI+  LP+      N  I                       + V VTN
Subjt:  LTFENSTPLGRVPHLQLLQPLVSPPSQGQDG----GNIVYGKYFTIKSKDLIRILSTLPMLGEALGNPMISLYCRFIFIYLEEIGASCSLFVTVCVRVTN

Query:  SQVKFSVGSHEIILTE
        S+VKFS+ S EIILTE
Subjt:  SQVKFSVGSHEIILTE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTGTTCATGCGGATGAATGTTGAAAACCTTGATCCTCTCATGGAAGCAACCTCCCTATTCACTCACTTAACCAACGACGAAGCCTACCTGGAAGTCACGCCATGGAG
GTTCACGATAATTGCCTCAAACCATTCCTCTCGCATCGTTGCAACGCTCAAACTTTCCTTTCGATTCTTCACAACCTATTCCATCGATGATCAGAATCCTCACAGATACA
GGATTTCCCTTCAACCCTTCTACCACGCCCTCTCGGTTGCCCGAAATTTTCATTCAATCTCCATTCATCTTCTCCCAACCATACATCAAATGACCCTTACATTTGAGAAT
TCAACACCTTTAGGGCGTGTCCCTCACTTGCAGTTGCTACAACCATTGGTATCGCCACCTTCGCAAGGACAGGATGGAGGCAATATCGTATATGGAAAATATTTCACAAT
TAAATCCAAAGATCTAATACGCATTCTATCCACACTACCTATGTTAGGAGAGGCTTTAGGTAATCCAATGATTTCTCTTTACTGTCGTTTCATATTTATTTACTTGGAAG
AAATTGGTGCAAGTTGTTCTCTTTTTGTCACAGTTTGTGTTAGGGTAACAAATTCACAAGTCAAATTTTCTGTTGGATCTCACGAGATTATTCTTACCGAAGAGGTACGA
ATTTGCTAA
mRNA sequenceShow/hide mRNA sequence
ATGTTGTTCATGCGGATGAATGTTGAAAACCTTGATCCTCTCATGGAAGCAACCTCCCTATTCACTCACTTAACCAACGACGAAGCCTACCTGGAAGTCACGCCATGGAG
GTTCACGATAATTGCCTCAAACCATTCCTCTCGCATCGTTGCAACGCTCAAACTTTCCTTTCGATTCTTCACAACCTATTCCATCGATGATCAGAATCCTCACAGATACA
GGATTTCCCTTCAACCCTTCTACCACGCCCTCTCGGTTGCCCGAAATTTTCATTCAATCTCCATTCATCTTCTCCCAACCATACATCAAATGACCCTTACATTTGAGAAT
TCAACACCTTTAGGGCGTGTCCCTCACTTGCAGTTGCTACAACCATTGGTATCGCCACCTTCGCAAGGACAGGATGGAGGCAATATCGTATATGGAAAATATTTCACAAT
TAAATCCAAAGATCTAATACGCATTCTATCCACACTACCTATGTTAGGAGAGGCTTTAGGTAATCCAATGATTTCTCTTTACTGTCGTTTCATATTTATTTACTTGGAAG
AAATTGGTGCAAGTTGTTCTCTTTTTGTCACAGTTTGTGTTAGGGTAACAAATTCACAAGTCAAATTTTCTGTTGGATCTCACGAGATTATTCTTACCGAAGAGGTACGA
ATTTGCTAA
Protein sequenceShow/hide protein sequence
MLFMRMNVENLDPLMEATSLFTHLTNDEAYLEVTPWRFTIIASNHSSRIVATLKLSFRFFTTYSIDDQNPHRYRISLQPFYHALSVARNFHSISIHLLPTIHQMTLTFEN
STPLGRVPHLQLLQPLVSPPSQGQDGGNIVYGKYFTIKSKDLIRILSTLPMLGEALGNPMISLYCRFIFIYLEEIGASCSLFVTVCVRVTNSQVKFSVGSHEIILTEEVR
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