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Lag0032268 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0032268
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationchr11:29222557..29223756
RNA-Seq ExpressionLag0032268
SyntenyLag0032268
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAA7026828.1 unnamed protein product [Microthlaspi erraticum]1.5e-0545.9Show/hide
Query:  LRGVEQRSQITGFQIASTSPSISHLFFADDSLHFFKAKVSEALVIRDLLIKDFEVYEGSHL
        LR  E+   ITG ++A  SP++SHLFFADDSL F +A V E+ V+  +L K++E+  G  +
Subjt:  LRGVEQRSQITGFQIASTSPSISHLFFADDSLHFFKAKVSEALVIRDLLIKDFEVYEGSHL

CAA7058559.1 unnamed protein product [Microthlaspi erraticum]3.2e-0545.33Show/hide
Query:  LRGVEQRSQITGFQIASTSPSISHLFFADDSLHFFKAKVSEALVIRDLLIKDFEVYEGSHLAPNSRE---GNPLP
        LRG E+  +ITG +IA TSPSISHL FADDSL F KA V +   +   +IK + +  G  L  +      GN +P
Subjt:  LRGVEQRSQITGFQIASTSPSISHLFFADDSLHFFKAKVSEALVIRDLLIKDFEVYEGSHLAPNSRE---GNPLP

XP_019158562.1 PREDICTED: uncharacterized protein LOC109155332 [Ipomoea nil]3.2e-0550Show/hide
Query:  MLRGVEQRSQITGFQIASTSPSISHLFFADDSLHFFKAKVSEALVIRDLLIKDFEVYEGSHL
        M+R  E R +I GF +A  +P ISHLFFADDS  FFKA V EA  ++ LL K +E   G  +
Subjt:  MLRGVEQRSQITGFQIASTSPSISHLFFADDSLHFFKAKVSEALVIRDLLIKDFEVYEGSHL

XP_022557568.1 uncharacterized protein LOC111205691 [Brassica napus]1.9e-0542.35Show/hide
Query:  LRGVEQRSQITGFQIASTSPSISHLFFADDSLHFFKAKVSEALVIRDLLIKDFEVYEGSHL---APNSREGNPLPCCVLYLRAVI
        +R  E+  ++TG +IA  SPSISHL FADDSL F KA + E  VI  LL +D+E+  G  +     + + G+ +P   +YLR  I
Subjt:  LRGVEQRSQITGFQIASTSPSISHLFFADDSLHFFKAKVSEALVIRDLLIKDFEVYEGSHL---APNSREGNPLPCCVLYLRAVI

XP_023911662.1 uncharacterized protein LOC112023276 [Quercus suber]1.1e-0527.12Show/hide
Query:  MLRGVEQRSQITGFQIASTSPSISHLFFADDSLHFFKAKVSEALVIRDLLIKDFEVYEGSHLAPNSREGNPLPCCVLYLRAVIFPSRGFLRKSWG-----
        M++       + G  +    P +SHLFFADD+L F KA + E     D L + F+VYE S    +S++ N       +   +    +  ++  +G     
Subjt:  MLRGVEQRSQITGFQIASTSPSISHLFFADDSLHFFKAKVSEALVIRDLLIKDFEVYEGSHLAPNSREGNPLPCCVLYLRAVIFPSRGFLRKSWG-----

Query:  ------------------HVRLLSNK-------HGTFSVRSGYRLAHMLAIKDRPSSSNPD-RMRVWWSSIWKLKVP
                            RL ++K       +G F+V+S Y++A  LAI     SS+ D  +R +W  IWK++VP
Subjt:  ------------------HVRLLSNK-------HGTFSVRSGYRLAHMLAIKDRPSSSNPD-RMRVWWSSIWKLKVP

TrEMBL top hitse value%identityAlignment
A0A2N9FQ02 Reverse transcriptase domain-containing protein4.1e-0626.17Show/hide
Query:  MLRGVEQRSQITGFQIASTSPSISHLFFADDSLHFFKAKVSEALVIRDLLIKDFEVYEGSHLAPNSREGNPLPCCVLYLRAVIFPSRGFLRKSWGHVRLL
        ++    +  ++ G  +    P I+H FFADDSL F KA   +   ++++L+     YE    A  + E NP                      W      
Subjt:  MLRGVEQRSQITGFQIASTSPSISHLFFADDSLHFFKAKVSEALVIRDLLIKDFEVYEGSHLAPNSREGNPLPCCVLYLRAVIFPSRGFLRKSWGHVRLL

Query:  SNKHGTFSVRSGYRLAHMLAIKDRPSSSNPDRMRVWWSSIWKLKVPNNL
          K G ++VRSGY+    +  +++PS SN   M   W  +W L+VP  +
Subjt:  SNKHGTFSVRSGYRLAHMLAIKDRPSSSNPDRMRVWWSSIWKLKVPNNL

A0A6D2IMI6 Reverse transcriptase domain-containing protein7.1e-0645.9Show/hide
Query:  LRGVEQRSQITGFQIASTSPSISHLFFADDSLHFFKAKVSEALVIRDLLIKDFEVYEGSHL
        LR  E+   ITG ++A  SP++SHLFFADDSL F +A V E+ V+  +L K++E+  G  +
Subjt:  LRGVEQRSQITGFQIASTSPSISHLFFADDSLHFFKAKVSEALVIRDLLIKDFEVYEGSHL

A0A6D2L2C0 Reverse transcriptase domain-containing protein1.6e-0545.33Show/hide
Query:  LRGVEQRSQITGFQIASTSPSISHLFFADDSLHFFKAKVSEALVIRDLLIKDFEVYEGSHLAPNSRE---GNPLP
        LRG E+  +ITG +IA TSPSISHL FADDSL F KA V +   +   +IK + +  G  L  +      GN +P
Subjt:  LRGVEQRSQITGFQIASTSPSISHLFFADDSLHFFKAKVSEALVIRDLLIKDFEVYEGSHLAPNSRE---GNPLP

A0A803P950 Uncharacterized protein7.8e-0529.8Show/hide
Query:  MLRGVEQRSQITGFQIASTSPSISHLFFADDSLHFFKAKVSEALVIRDLLIKDFEVY-EGSHLAPNSREGNPLPCCVLYLRAVIFPSRGFLRKS---WGH
        +L+  + R  + G  I+ TSP ISHL FADD++ F  A  S    + + L    E   +  +L  N  + +      L    +  P  G   +    WG 
Subjt:  MLRGVEQRSQITGFQIASTSPSISHLFFADDSLHFFKAKVSEALVIRDLLIKDFEVY-EGSHLAPNSREGNPLPCCVLYLRAVIFPSRGFLRKS---WGH

Query:  VRLLSNKHGTFSVRSGYRLAHMLAIKDRPSSSNPDRMRVWWSSIWKLKVPN
                G FSV+S Y LA  ++ +D PSSS+ +  + +WS +W   VP+
Subjt:  VRLLSNKHGTFSVRSGYRLAHMLAIKDRPSSSNPDRMRVWWSSIWKLKVPN

A0A803PSF4 Uncharacterized protein1.9e-0625.44Show/hide
Query:  EQRSQITGFQIASTSPSISHLFFADDSLHFFKAKVSEALVIRDLLIKDFE------------VYEGSHLAPNSR-----------EG-----NPLPCCVL
        E+ +  +G +I   +PS SHL FADDS+ F       +  I ++L+  F+            +    + +P+S+           EG       +P CV 
Subjt:  EQRSQITGFQIASTSPSISHLFFADDSLHFFKAKVSEALVIRDLLIKDFE------------VYEGSHLAPNSR-----------EG-----NPLPCCVL

Query:  YLRAVIFPSRGFLRKSWGHVRLLSNKHGTFSVRSGYRLAHMLAIKDRPSSSNPDRMRVWWSSIWKLKVP
         ++  IF     ++K    + + + K  + +V S Y LA    +   PS+S+P+  + WW ++W LK+P
Subjt:  YLRAVIFPSRGFLRKSWGHVRLLSNKHGTFSVRSGYRLAHMLAIKDRPSSSNPDRMRVWWSSIWKLKVP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTGCGTGGAGTTGAACAGAGGTCTCAGATCACTGGGTTTCAAATTGCGAGTACTAGCCCGTCGATCTCGCATCTTTTCTTTGCAGATGACAGTCTCCATTTCTTCAA
GGCCAAGGTGAGTGAGGCGTTGGTCATTCGTGATCTATTGATCAAGGACTTTGAAGTTTACGAAGGATCGCATTTGGCGCCAAATTCAAGGGAAGGGAACCCTCTTCCAT
GCTGTGTTTTGTACTTAAGAGCCGTTATTTTCCCCAGTCGAGGTTTCTTGAGGAAGAGTTGGGGTCACGTCCGTCTTTTGTCTAACAAGCATGGGACTTTTTCTGTGAGG
AGTGGGTATCGACTTGCTCACATGTTGGCTATTAAGGATCGTCCTTCCTCCTCGAATCCTGATAGAATGCGTGTGTGGTGGTCTTCCATATGGAAGCTAAAGGTGCCTAA
TAACCTATGA
mRNA sequenceShow/hide mRNA sequence
ATGTTGCGTGGAGTTGAACAGAGGTCTCAGATCACTGGGTTTCAAATTGCGAGTACTAGCCCGTCGATCTCGCATCTTTTCTTTGCAGATGACAGTCTCCATTTCTTCAA
GGCCAAGGTGAGTGAGGCGTTGGTCATTCGTGATCTATTGATCAAGGACTTTGAAGTTTACGAAGGATCGCATTTGGCGCCAAATTCAAGGGAAGGGAACCCTCTTCCAT
GCTGTGTTTTGTACTTAAGAGCCGTTATTTTCCCCAGTCGAGGTTTCTTGAGGAAGAGTTGGGGTCACGTCCGTCTTTTGTCTAACAAGCATGGGACTTTTTCTGTGAGG
AGTGGGTATCGACTTGCTCACATGTTGGCTATTAAGGATCGTCCTTCCTCCTCGAATCCTGATAGAATGCGTGTGTGGTGGTCTTCCATATGGAAGCTAAAGGTGCCTAA
TAACCTATGA
Protein sequenceShow/hide protein sequence
MLRGVEQRSQITGFQIASTSPSISHLFFADDSLHFFKAKVSEALVIRDLLIKDFEVYEGSHLAPNSREGNPLPCCVLYLRAVIFPSRGFLRKSWGHVRLLSNKHGTFSVR
SGYRLAHMLAIKDRPSSSNPDRMRVWWSSIWKLKVPNNL