; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0032288 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0032288
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionCCHC-type domain-containing protein
Genome locationchr11:29640840..29646568
RNA-Seq ExpressionLag0032288
SyntenyLag0032288
Gene Ontology termsNA
InterPro domainsIPR036691 - Endonuclease/exonuclease/phosphatase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG2663507.1 hypothetical protein I3760_16G033000 [Carya illinoinensis]4.1e-2147.46Show/hide
Query:  VDSEWL---YGNPDSSLQVNSWNLLRRLHDFNDSAWVIGGDLNEILWQSEKSRGLDREVRQLMAFTEVLDDFNLRDLGYSGDVFTWCNRRSSGETVRLRL
        V+  WL   YGN D S +  SWNLLR L   +D  W+I GD NEIL  +EKS G D+  RQ+ AF +V+D+ +L DLG++G+ FTWCNRR     +  RL
Subjt:  VDSEWL---YGNPDSSLQVNSWNLLRRLHDFNDSAWVIGGDLNEILWQSEKSRGLDREVRQLMAFTEVLDDFNLRDLGYSGDVFTWCNRRSSGETVRLRL

Query:  DRFLANSNFCDLFANADV
        DRFL+N  +   +  A V
Subjt:  DRFLANSNFCDLFANADV

XP_012850482.1 PREDICTED: uncharacterized protein LOC105970218 [Erythranthe guttata]2.4e-2141.78Show/hide
Query:  WLYGNPDSSLQVNSWNLLRRLHDFNDSAWVIGGDLNEILWQSEKSRGLDREVRQLMAFTEVLDDFNLRDLGYSGDVFTWCNRRSSGETVRLRLDRFLANS
        W YG P+   +  SW+LLR LH+     W+IGGD NEIL  SEK  GL R   Q+ AF E+LD  NL D+GY G  FTW N+R    T+R RLDR  AN 
Subjt:  WLYGNPDSSLQVNSWNLLRRLHDFNDSAWVIGGDLNEILWQSEKSRGLDREVRQLMAFTEVLDDFNLRDLGYSGDVFTWCNRRSSGETVRLRLDRFLANS

Query:  NFCDLFANADVQIANRKCMGQPFKPLFCPVLRLQNVPKENPQKPSR
         +  +F   D +  +    G    P+   ++ LQ  P+ N +K  R
Subjt:  NFCDLFANADVQIANRKCMGQPFKPLFCPVLRLQNVPKENPQKPSR

XP_042951290.1 uncharacterized protein LOC122285342 [Carya illinoinensis]7.0e-2147.71Show/hide
Query:  YGNPDSSLQVNSWNLLRRLHDFNDSAWVIGGDLNEILWQSEKSRGLDREVRQLMAFTEVLDDFNLRDLGYSGDVFTWCNRRSSGETVRLRLDRFLANSNF
        YGNPD S +  SWNLL  L   +D  W++ GD NEIL  +EKS G D+  RQ+ AF +V+D+ +L+DLG++G+ FTWCNRR     +  RLDRFL+N  +
Subjt:  YGNPDSSLQVNSWNLLRRLHDFNDSAWVIGGDLNEILWQSEKSRGLDREVRQLMAFTEVLDDFNLRDLGYSGDVFTWCNRRSSGETVRLRLDRFLANSNF

Query:  CDLFANADV
           +  A V
Subjt:  CDLFANADV

XP_042954684.1 uncharacterized protein LOC122291103 [Carya illinoinensis]3.2e-2147.46Show/hide
Query:  VDSEWL---YGNPDSSLQVNSWNLLRRLHDFNDSAWVIGGDLNEILWQSEKSRGLDREVRQLMAFTEVLDDFNLRDLGYSGDVFTWCNRRSSGETVRLRL
        VD  WL   YGNPD S +  SWNLLR L   ++  W+I GDLNEI+  +EKS G D+  RQ+ A  +V+D+ +L DLG++G+ FTWCNRR     +  RL
Subjt:  VDSEWL---YGNPDSSLQVNSWNLLRRLHDFNDSAWVIGGDLNEILWQSEKSRGLDREVRQLMAFTEVLDDFNLRDLGYSGDVFTWCNRRSSGETVRLRL

Query:  DRFLANSNFCDLFANADV
        DRFL+N  +   +  A V
Subjt:  DRFLANSNFCDLFANADV

XP_042958008.1 uncharacterized protein LOC122293496 [Carya illinoinensis]1.1e-2149.15Show/hide
Query:  VDSEWL---YGNPDSSLQVNSWNLLRRLHDFNDSAWVIGGDLNEILWQSEKSRGLDREVRQLMAFTEVLDDFNLRDLGYSGDVFTWCNRRSSGETVRLRL
        V+S WL   YGN D S +  SWNLLR L   +D  W+I GD NEIL  +EKS G D+  RQ+ AFT+V+D+ +L DLG++G  FTWCNRR     +  RL
Subjt:  VDSEWL---YGNPDSSLQVNSWNLLRRLHDFNDSAWVIGGDLNEILWQSEKSRGLDREVRQLMAFTEVLDDFNLRDLGYSGDVFTWCNRRSSGETVRLRL

Query:  DRFLANSNFCDLFANADV
        DRFL N  +   +  A V
Subjt:  DRFLANSNFCDLFANADV

TrEMBL top hitse value%identityAlignment
A0A2I4HRH1 uncharacterized protein LOC1090206462.9e-2046.36Show/hide
Query:  LYGNPDSSLQVNSWNLLRRLHDFNDSAWVIGGDLNEILWQSEKSRGLDREVRQLMAFTEVLDDFNLRDLGYSGDVFTWCNRRSSGETVRLRLDRFLANSN
        +YG P++ L+  +W LLR L   ND  W++ GD NE+++  EK  G  R   QL  F EV++D NL DLG+SG  FTW NRR   + +  R+DRFL NS 
Subjt:  LYGNPDSSLQVNSWNLLRRLHDFNDSAWVIGGDLNEILWQSEKSRGLDREVRQLMAFTEVLDDFNLRDLGYSGDVFTWCNRRSSGETVRLRLDRFLANSN

Query:  FCDLFANADV
        + D F NA V
Subjt:  FCDLFANADV

A0A2N9ELB0 Uncharacterized protein1.7e-2048.62Show/hide
Query:  YGNPDSSLQVNSWNLLRRLHDFNDSAWVIGGDLNEILWQSEKSRGLDREVRQLMAFTEVLDDFNLRDLGYSGDVFTWCNRRSSGETVRLRLDRFLANSNF
        YG+P+ +L+ +SW+LLR LH      W++ GD NEI    EK    DR + Q+ AF E L D +LRDLGY G  FTW NRR +G  VR+RLDR +AN  +
Subjt:  YGNPDSSLQVNSWNLLRRLHDFNDSAWVIGGDLNEILWQSEKSRGLDREVRQLMAFTEVLDDFNLRDLGYSGDVFTWCNRRSSGETVRLRLDRFLANSNF

Query:  CDLFANADV
          LF  A V
Subjt:  CDLFANADV

A0A2N9I236 Peptidylprolyl isomerase1.3e-2040Show/hide
Query:  YGNPDSSLQVNSWNLLRRLHDFNDSAWVIGGDLNEILWQSEKSRGLDREVRQLMAFTEVLDDFNLRDLGYSGDVFTWCNRRSSGETVRLRLDRFLANSNF
        YG P+ +L+  SW+LLRRLH  + + W++ GD NEI+   EKS   DR + Q+ AF E L D  LRDLG+ G  FTW NRR++   VR+RLDR +ANS +
Subjt:  YGNPDSSLQVNSWNLLRRLHDFNDSAWVIGGDLNEILWQSEKSRGLDREVRQLMAFTEVLDDFNLRDLGYSGDVFTWCNRRSSGETVRLRLDRFLANSNF

Query:  CDLFAN---ADVQIANRKCMGQPFKPLFCPVLRLQNVPKENPQKPSRRKLIFCFFRHSVE
          LF     A V ++N   MG          L +  +P+       RR  +F F   S++
Subjt:  CDLFAN---ADVQIANRKCMGQPFKPLFCPVLRLQNVPKENPQKPSRRKLIFCFFRHSVE

A0A2N9I5P9 Uncharacterized protein9.9e-2148.62Show/hide
Query:  YGNPDSSLQVNSWNLLRRLHDFNDSAWVIGGDLNEILWQSEKSRGLDREVRQLMAFTEVLDDFNLRDLGYSGDVFTWCNRRSSGETVRLRLDRFLANSNF
        YG+P+ +L+ +SW+LLR LH      W++ GD NEI    EK    DR + Q++AF E L D +LRDLGY G  FTW NRR +G  VR+RLDR +AN  +
Subjt:  YGNPDSSLQVNSWNLLRRLHDFNDSAWVIGGDLNEILWQSEKSRGLDREVRQLMAFTEVLDDFNLRDLGYSGDVFTWCNRRSSGETVRLRLDRFLANSNF

Query:  CDLFANADV
          LF  A V
Subjt:  CDLFANADV

A0A6P9EM92 uncharacterized protein LOC1089797763.4e-2146.22Show/hide
Query:  EW----LYGNPDSSLQVNSWNLLRRLHDFNDS--AWVIGGDLNEILWQSEKSRGLDREVRQLMAFTEVLDDFNLRDLGYSGDVFTWCNRRSSGETVRLRL
        EW    +YGNP +  +  +W+L+R+LHD +D    W++GGD NE+L  SEK RG  R   Q+ AF EVL D +LRD+G+ G  FTW N R   E +  RL
Subjt:  EW----LYGNPDSSLQVNSWNLLRRLHDFNDS--AWVIGGDLNEILWQSEKSRGLDREVRQLMAFTEVLDDFNLRDLGYSGDVFTWCNRRSSGETVRLRL

Query:  DRFLANSNFCDLFANADVQ
        DRFL N++F  LF    V+
Subjt:  DRFLANSNFCDLFANADVQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAAAAATCCCCCGCAATCAACAAGATCAGAAATGGGAAATACGAGAAAAGCTCGAACGAGTTACCTGCCACCGACAATGGCTTCTTAAATCCCGAAGCCGGAGAGGC
GATTTCCGACCGGTCGTCTGGCGTTTTACGGCGCATGCTGGAAAGGGCTAAGATCGTTGATTTTTCTAAGTTATGGCCATTTTCAAATTTGCTGGATTCTTGCTGTGGAT
TTTCAGCTCTCAAGCTGCTATTTCAGGGAAGATGCTGGAGTGATGGATCATCATCTGTCTTGGTGGTAATTTTCTCCTTTCTCTACTACTGTGTCTTTTGCTTTTCCGTT
TGCTTCGATTCCATGGATCCCTCTGTTGGGTTTTATGCCCTAAAACTCGTAGATAGTGAATGGTTGTATGGTAACCCTGATTCTTCTCTGCAAGTTAACTCATGGAATCT
TCTTAGGAGATTGCATGATTTTAATGATTCTGCGTGGGTGATAGGGGGCGATTTGAATGAAATTCTATGGCAGTCAGAGAAGTCAAGAGGGCTGGATAGAGAGGTTCGAC
AATTAATGGCATTCACAGAAGTTTTAGATGATTTCAATCTTCGAGATCTTGGTTACTCTGGGGATGTGTTTACGTGGTGTAACAGGCGAAGTTCAGGGGAAACGGTCCGA
TTGAGGCTGGATCGTTTCCTAGCAAACTCAAATTTCTGTGATCTTTTTGCTAATGCTGATGTGCAAATTGCTAACCGCAAGTGTATGGGTCAACCTTTCAAGCCTCTGTT
CTGCCCTGTTTTACGGCTCCAAAACGTTCCAAAAGAGAATCCCCAAAAACCTAGCCGCAGAAAGCTTATATTCTGTTTTTTTCGTCATAGCGTCGAGACGCTGCCTTCAA
AACGCGCGTTTTCTAGAATCGAACTTACACAGCGTCGAGACGCTAAGGTCGCAGCGTCGAGACGCTGTGACCTTTTAGCGCCTGATCAGATATAG
mRNA sequenceShow/hide mRNA sequence
ATGCAAAAATCCCCCGCAATCAACAAGATCAGAAATGGGAAATACGAGAAAAGCTCGAACGAGTTACCTGCCACCGACAATGGCTTCTTAAATCCCGAAGCCGGAGAGGC
GATTTCCGACCGGTCGTCTGGCGTTTTACGGCGCATGCTGGAAAGGGCTAAGATCGTTGATTTTTCTAAGTTATGGCCATTTTCAAATTTGCTGGATTCTTGCTGTGGAT
TTTCAGCTCTCAAGCTGCTATTTCAGGGAAGATGCTGGAGTGATGGATCATCATCTGTCTTGGTGGTAATTTTCTCCTTTCTCTACTACTGTGTCTTTTGCTTTTCCGTT
TGCTTCGATTCCATGGATCCCTCTGTTGGGTTTTATGCCCTAAAACTCGTAGATAGTGAATGGTTGTATGGTAACCCTGATTCTTCTCTGCAAGTTAACTCATGGAATCT
TCTTAGGAGATTGCATGATTTTAATGATTCTGCGTGGGTGATAGGGGGCGATTTGAATGAAATTCTATGGCAGTCAGAGAAGTCAAGAGGGCTGGATAGAGAGGTTCGAC
AATTAATGGCATTCACAGAAGTTTTAGATGATTTCAATCTTCGAGATCTTGGTTACTCTGGGGATGTGTTTACGTGGTGTAACAGGCGAAGTTCAGGGGAAACGGTCCGA
TTGAGGCTGGATCGTTTCCTAGCAAACTCAAATTTCTGTGATCTTTTTGCTAATGCTGATGTGCAAATTGCTAACCGCAAGTGTATGGGTCAACCTTTCAAGCCTCTGTT
CTGCCCTGTTTTACGGCTCCAAAACGTTCCAAAAGAGAATCCCCAAAAACCTAGCCGCAGAAAGCTTATATTCTGTTTTTTTCGTCATAGCGTCGAGACGCTGCCTTCAA
AACGCGCGTTTTCTAGAATCGAACTTACACAGCGTCGAGACGCTAAGGTCGCAGCGTCGAGACGCTGTGACCTTTTAGCGCCTGATCAGATATAG
Protein sequenceShow/hide protein sequence
MQKSPAINKIRNGKYEKSSNELPATDNGFLNPEAGEAISDRSSGVLRRMLERAKIVDFSKLWPFSNLLDSCCGFSALKLLFQGRCWSDGSSSVLVVIFSFLYYCVFCFSV
CFDSMDPSVGFYALKLVDSEWLYGNPDSSLQVNSWNLLRRLHDFNDSAWVIGGDLNEILWQSEKSRGLDREVRQLMAFTEVLDDFNLRDLGYSGDVFTWCNRRSSGETVR
LRLDRFLANSNFCDLFANADVQIANRKCMGQPFKPLFCPVLRLQNVPKENPQKPSRRKLIFCFFRHSVETLPSKRAFSRIELTQRRDAKVAASRRCDLLAPDQI