; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0032290 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0032290
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Descriptionzf-RVT domain-containing protein
Genome locationchr11:29656925..29662317
RNA-Seq ExpressionLag0032290
SyntenyLag0032290
Gene Ontology termsGO:0006807 - nitrogen compound metabolic process (biological process)
GO:0043170 - macromolecule metabolic process (biological process)
GO:0044238 - primary metabolic process (biological process)
GO:0016020 - membrane (cellular component)
GO:0016787 - hydrolase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0041012.1 uncharacterized protein E6C27_scaffold125G002320 [Cucumis melo var. makuwa]8.1e-1534.55Show/hide
Query:  RSLSDRETTDIMTLLSLIDGASLRSDRRDARFWSLDPSAGFSCRSFFQFLVNPSPVRKSVFSCLWKVKAPKKVLFFAWQAEENLDHLLWNCEFARSVWSF
        R  S +E T + +LLS + G S R  RRD   W+ +PS GF   S F  L++P+P ++ VF  +W    PKKV+FF WQ   + D     C+FAR VWS 
Subjt:  RSLSDRETTDIMTLLSLIDGASLRSDRRDARFWSLDPSAGFSCRSFFQFLVNPSPVRKSVFSCLWKVKAPKKVLFFAWQAEENLDHLLWNCEFARSVWSF

Query:  SLRSSSFSLRATAIVGIRSRSSSSIIR--FGRKESFFGLLECVLFCGAYRGKGTIESIEGPRDII
         L+   F +   ++  +R+     ++   F  K +F+G   CV     +    TI   EG R I+
Subjt:  SLRSSSFSLRATAIVGIRSRSSSSIIR--FGRKESFFGLLECVLFCGAYRGKGTIESIEGPRDII

KAA0054311.1 golgin subfamily A member 6-like protein 22 isoform X2 [Cucumis melo var. makuwa]5.1e-1734.54Show/hide
Query:  VADIVGPVGSSTSFSFGFRRSLSDRETTDIMTLLSLIDGASLRSDRRDARFWSLDPSAGFSCRSFFQFLVNPSPVRKSVFSCLWKVKAPKKVLFFAWQA-
        +  +V PV    SFS+GFR +L+++E T++ +LL+L+DG + + +RRD R  + +PS GF C+S F  L++PSP  + VF  + + K PKKV FF WQ  
Subjt:  VADIVGPVGSSTSFSFGFRRSLSDRETTDIMTLLSLIDGASLRSDRRDARFWSLDPSAGFSCRSFFQFLVNPSPVRKSVFSCLWKVKAPKKVLFFAWQA-

Query:  -EENLDHLL---------WNCEFARSVWSFS---LRSSSFSLRATAIVGI---------RSRSSSSIIRFGRKESFFGLLECVLFCGAYRGKGT
            +D L+         + C   R +  F    +R    +L   ++V +         R RSSSSI +   K  FFG    VL  G +  +GT
Subjt:  -EENLDHLL---------WNCEFARSVWSFS---LRSSSFSLRATAIVGI---------RSRSSSSIIRFGRKESFFGLLECVLFCGAYRGKGT

TYK09969.1 calpain-type cysteine protease DEK1 [Cucumis melo var. makuwa]2.2e-2850.39Show/hide
Query:  VADIVGPVGSSTSFSFGFRRSLSDRETTDIMTLLSLIDGASLRSDRRDARFWSLDPSAGFSCRSFFQFLVNPSPVRKSVFSCLWKVKAPKKVLFFAWQAE
        +AD +   G+S SFSFGFRR+LSDRET++++ L+SL++  S R  RRD   WS  P  GF C+SFFQ LVN +P  +SV S +W++K P+K + F+WQ E
Subjt:  VADIVGPVGSSTSFSFGFRRSLSDRETTDIMTLLSLIDGASLRSDRRDARFWSLDPSAGFSCRSFFQFLVNPSPVRKSVFSCLWKVKAPKKVLFFAWQAE

Query:  ENLDHLLWNCEFARSVWSFSLRSSSFS
        E+LDHLLW+CE    VW   L++   S
Subjt:  ENLDHLLWNCEFARSVWSFSLRSSSFS

TYK29954.1 reverse transcriptase [Cucumis melo var. makuwa]2.2e-1230.86Show/hide
Query:  LRSDRRDARFWSLDPSAGFSCRSFFQFLVNPSPVRKSVFSCLWKVKAPKKVLFFAWQ------------------------------AEENLDHLLWNCE
        L    R+   WS +PS GFS +S F  L++PSP R+ VF  +W++K  KKV FF WQ                              A+E+LDHLLW+C+
Subjt:  LRSDRRDARFWSLDPSAGFSCRSFFQFLVNPSPVRKSVFSCLWKVKAPKKVLFFAWQ------------------------------AEENLDHLLWNCE

Query:  FARSVWSFSLRSSSFSLRATAIVGIRSRSSSSIIRFGRKESFFGLLECVLFCGAYRGKGTIE
        +AR+VW   L+   F +R   +  +R      ++   R  S FG     L    ++  G ++
Subjt:  FARSVWSFSLRSSSFSLRATAIVGIRSRSSSSIIRFGRKESFFGLLECVLFCGAYRGKGTIE

XP_022151711.1 uncharacterized protein LOC111019624 [Momordica charantia]3.4e-1333.33Show/hide
Query:  KFCTVADIVGPVGSSTSFSFGFRRSLSDRETTDIMTLLSLIDGASLRSDRRDARFWSLDPSAGFSCRSFFQFLVNPS--------------PVRKSVFSC
        K  +VA+++      +S S G  RSL+D E+ +I  LL L+   S  S R D R W  +P  GFSC SFFQ L++PS               +    F+ 
Subjt:  KFCTVADIVGPVGSSTSFSFGFRRSLSDRETTDIMTLLSLIDGASLRSDRRDARFWSLDPSAGFSCRSFFQFLVNPS--------------PVRKSVFSC

Query:  LWKVKAPKKVLFFAWQAEE-------------NLDHLLWNCEFARSVWSFSLRSSS
        LWK+K PKK+ FF WQ  +             N    LW   F  S+W   L  ++
Subjt:  LWKVKAPKKVLFFAWQAEE-------------NLDHLLWNCEFARSVWSFSLRSSS

TrEMBL top hitse value%identityAlignment
A0A5A7UL95 Golgin subfamily A member 6-like protein 22 isoform X22.5e-1734.54Show/hide
Query:  VADIVGPVGSSTSFSFGFRRSLSDRETTDIMTLLSLIDGASLRSDRRDARFWSLDPSAGFSCRSFFQFLVNPSPVRKSVFSCLWKVKAPKKVLFFAWQA-
        +  +V PV    SFS+GFR +L+++E T++ +LL+L+DG + + +RRD R  + +PS GF C+S F  L++PSP  + VF  + + K PKKV FF WQ  
Subjt:  VADIVGPVGSSTSFSFGFRRSLSDRETTDIMTLLSLIDGASLRSDRRDARFWSLDPSAGFSCRSFFQFLVNPSPVRKSVFSCLWKVKAPKKVLFFAWQA-

Query:  -EENLDHLL---------WNCEFARSVWSFS---LRSSSFSLRATAIVGI---------RSRSSSSIIRFGRKESFFGLLECVLFCGAYRGKGT
            +D L+         + C   R +  F    +R    +L   ++V +         R RSSSSI +   K  FFG    VL  G +  +GT
Subjt:  -EENLDHLL---------WNCEFARSVWSFS---LRSSSFSLRATAIVGI---------RSRSSSSIIRFGRKESFFGLLECVLFCGAYRGKGT

A0A5D3CI74 Calpain-type cysteine protease DEK11.1e-2850.39Show/hide
Query:  VADIVGPVGSSTSFSFGFRRSLSDRETTDIMTLLSLIDGASLRSDRRDARFWSLDPSAGFSCRSFFQFLVNPSPVRKSVFSCLWKVKAPKKVLFFAWQAE
        +AD +   G+S SFSFGFRR+LSDRET++++ L+SL++  S R  RRD   WS  P  GF C+SFFQ LVN +P  +SV S +W++K P+K + F+WQ E
Subjt:  VADIVGPVGSSTSFSFGFRRSLSDRETTDIMTLLSLIDGASLRSDRRDARFWSLDPSAGFSCRSFFQFLVNPSPVRKSVFSCLWKVKAPKKVLFFAWQAE

Query:  ENLDHLLWNCEFARSVWSFSLRSSSFS
        E+LDHLLW+CE    VW   L++   S
Subjt:  ENLDHLLWNCEFARSVWSFSLRSSSFS

A0A5D3DA77 Reverse transcriptase domain-containing protein3.9e-1534.55Show/hide
Query:  RSLSDRETTDIMTLLSLIDGASLRSDRRDARFWSLDPSAGFSCRSFFQFLVNPSPVRKSVFSCLWKVKAPKKVLFFAWQAEENLDHLLWNCEFARSVWSF
        R  S +E T + +LLS + G S R  RRD   W+ +PS GF   S F  L++P+P ++ VF  +W    PKKV+FF WQ   + D     C+FAR VWS 
Subjt:  RSLSDRETTDIMTLLSLIDGASLRSDRRDARFWSLDPSAGFSCRSFFQFLVNPSPVRKSVFSCLWKVKAPKKVLFFAWQAEENLDHLLWNCEFARSVWSF

Query:  SLRSSSFSLRATAIVGIRSRSSSSIIR--FGRKESFFGLLECVLFCGAYRGKGTIESIEGPRDII
         L+   F +   ++  +R+     ++   F  K +F+G   CV     +    TI   EG R I+
Subjt:  SLRSSSFSLRATAIVGIRSRSSSSIIR--FGRKESFFGLLECVLFCGAYRGKGTIESIEGPRDII

A0A5D3E255 Reverse transcriptase1.1e-1230.86Show/hide
Query:  LRSDRRDARFWSLDPSAGFSCRSFFQFLVNPSPVRKSVFSCLWKVKAPKKVLFFAWQ------------------------------AEENLDHLLWNCE
        L    R+   WS +PS GFS +S F  L++PSP R+ VF  +W++K  KKV FF WQ                              A+E+LDHLLW+C+
Subjt:  LRSDRRDARFWSLDPSAGFSCRSFFQFLVNPSPVRKSVFSCLWKVKAPKKVLFFAWQ------------------------------AEENLDHLLWNCE

Query:  FARSVWSFSLRSSSFSLRATAIVGIRSRSSSSIIRFGRKESFFGLLECVLFCGAYRGKGTIE
        +AR+VW   L+   F +R   +  +R      ++   R  S FG     L    ++  G ++
Subjt:  FARSVWSFSLRSSSFSLRATAIVGIRSRSSSSIIRFGRKESFFGLLECVLFCGAYRGKGTIE

A0A6J1DFI2 uncharacterized protein LOC1110196241.7e-1333.33Show/hide
Query:  KFCTVADIVGPVGSSTSFSFGFRRSLSDRETTDIMTLLSLIDGASLRSDRRDARFWSLDPSAGFSCRSFFQFLVNPS--------------PVRKSVFSC
        K  +VA+++      +S S G  RSL+D E+ +I  LL L+   S  S R D R W  +P  GFSC SFFQ L++PS               +    F+ 
Subjt:  KFCTVADIVGPVGSSTSFSFGFRRSLSDRETTDIMTLLSLIDGASLRSDRRDARFWSLDPSAGFSCRSFFQFLVNPS--------------PVRKSVFSC

Query:  LWKVKAPKKVLFFAWQAEE-------------NLDHLLWNCEFARSVWSFSLRSSS
        LWK+K PKK+ FF WQ  +             N    LW   F  S+W   L  ++
Subjt:  LWKVKAPKKVLFFAWQAEE-------------NLDHLLWNCEFARSVWSFSLRSSS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAATTTTGCACTGTGGCGGACATCGTTGGTCCTGTGGGGAGTTCCACCTCGTTCTCTTTTGGTTTTCGTCGTTCGTTATCTGATAGAGAGACCACAGACATCATGAC
CCTCTTATCTTTGATTGATGGGGCTAGCCTTAGATCGGACAGGAGGGATGCACGCTTTTGGAGTCTTGACCCCTCTGCGGGCTTTTCCTGCAGATCGTTTTTTCAGTTTC
TGGTCAATCCCTCCCCCGTTAGAAAGTCTGTCTTTTCATGTCTCTGGAAGGTAAAGGCTCCGAAGAAGGTCTTGTTCTTTGCTTGGCAGGCTGAGGAAAATCTTGATCAT
TTGCTATGGAATTGTGAGTTTGCTCGTTCTGTCTGGAGTTTTTCTTTGAGGTCTTCGAGTTTCAGTTTGCGAGCCACCGCCATTGTAGGGATTCGATCGAGGAGTTCCTC
CTCCATCATCCGATTCGGAAGAAAGGAAAGTTTCTTTGGCTTGTTGGAGTGTGTGTTATTTTGTGGGGCTTATAGGGGGAAGGGAACAATAGAATCTATAGAGGGACCGA
GAGACATTATTAATAAAAAAAAGGAAAGAAAATACAGAAAAGGAAACAAACTCACAGAGATCTCTCCTCTCTGTTTCATTTTCCTTGTTTTCGCTTCGTGGCGTTCTGCA
AGATTTGAACGATTAGATTCTCCGAGATCTGCAGCGTTTTCTTCTTCAATTTTTTGCTTCAACAAACAAATCGTCTTCTCCATGGTATTGTTTAGGGCTTTGTCTTCTTC
ACAGCGACAATCTGGTGGGTTTCACGACCAAAAAAGGTTAGGGCTTTGTCTTCTTCAAAACTCCGACAACAATCTTGTGGGTTTCACGGCGAAGATTTCGAGCACAAGAG
GATCATTAGGCCAATTTGCTAATTTGATGCTAATTCAGACAACTAGAAGTGTTTTTGAGCTATCTTGGAGTCCCCGAAGCAACGAGGAAGCTAAAGGATGTGAGCGGAGT
GTTCGAACCTCGAGATTGGAGTCAAACGACACAAATAGCCGCTGCACAAATTTGGAAACCTGA
mRNA sequenceShow/hide mRNA sequence
ATGAAATTTTGCACTGTGGCGGACATCGTTGGTCCTGTGGGGAGTTCCACCTCGTTCTCTTTTGGTTTTCGTCGTTCGTTATCTGATAGAGAGACCACAGACATCATGAC
CCTCTTATCTTTGATTGATGGGGCTAGCCTTAGATCGGACAGGAGGGATGCACGCTTTTGGAGTCTTGACCCCTCTGCGGGCTTTTCCTGCAGATCGTTTTTTCAGTTTC
TGGTCAATCCCTCCCCCGTTAGAAAGTCTGTCTTTTCATGTCTCTGGAAGGTAAAGGCTCCGAAGAAGGTCTTGTTCTTTGCTTGGCAGGCTGAGGAAAATCTTGATCAT
TTGCTATGGAATTGTGAGTTTGCTCGTTCTGTCTGGAGTTTTTCTTTGAGGTCTTCGAGTTTCAGTTTGCGAGCCACCGCCATTGTAGGGATTCGATCGAGGAGTTCCTC
CTCCATCATCCGATTCGGAAGAAAGGAAAGTTTCTTTGGCTTGTTGGAGTGTGTGTTATTTTGTGGGGCTTATAGGGGGAAGGGAACAATAGAATCTATAGAGGGACCGA
GAGACATTATTAATAAAAAAAAGGAAAGAAAATACAGAAAAGGAAACAAACTCACAGAGATCTCTCCTCTCTGTTTCATTTTCCTTGTTTTCGCTTCGTGGCGTTCTGCA
AGATTTGAACGATTAGATTCTCCGAGATCTGCAGCGTTTTCTTCTTCAATTTTTTGCTTCAACAAACAAATCGTCTTCTCCATGGTATTGTTTAGGGCTTTGTCTTCTTC
ACAGCGACAATCTGGTGGGTTTCACGACCAAAAAAGGTTAGGGCTTTGTCTTCTTCAAAACTCCGACAACAATCTTGTGGGTTTCACGGCGAAGATTTCGAGCACAAGAG
GATCATTAGGCCAATTTGCTAATTTGATGCTAATTCAGACAACTAGAAGTGTTTTTGAGCTATCTTGGAGTCCCCGAAGCAACGAGGAAGCTAAAGGATGTGAGCGGAGT
GTTCGAACCTCGAGATTGGAGTCAAACGACACAAATAGCCGCTGCACAAATTTGGAAACCTGA
Protein sequenceShow/hide protein sequence
MKFCTVADIVGPVGSSTSFSFGFRRSLSDRETTDIMTLLSLIDGASLRSDRRDARFWSLDPSAGFSCRSFFQFLVNPSPVRKSVFSCLWKVKAPKKVLFFAWQAEENLDH
LLWNCEFARSVWSFSLRSSSFSLRATAIVGIRSRSSSSIIRFGRKESFFGLLECVLFCGAYRGKGTIESIEGPRDIINKKKERKYRKGNKLTEISPLCFIFLVFASWRSA
RFERLDSPRSAAFSSSIFCFNKQIVFSMVLFRALSSSQRQSGGFHDQKRLGLCLLQNSDNNLVGFTAKISSTRGSLGQFANLMLIQTTRSVFELSWSPRSNEEAKGCERS
VRTSRLESNDTNSRCTNLET