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Lag0032295 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0032295
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionZinc finger BED domain-containing protein DAYSLEEPER-like
Genome locationchr11:29800823..29802668
RNA-Seq ExpressionLag0032295
SyntenyLag0032295
Gene Ontology termsNA
InterPro domainsIPR012337 - Ribonuclease H-like superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0051301.1 uncharacterized protein E6C27_scaffold55G00080 [Cucumis melo var. makuwa]1.7e-1851.89Show/hide
Query:  NILSRLAYSTTLESIKKTIKNLDALVVGIVGFPHALLVWAYECIPLLSGPTMICAQKVSREMPKMINWVADCHLEWKDLAIK------FEFYEMMDER--
        +++ RL Y+  ++SIKK+IKNL ALVVGI  F ++LLV  YECIPLL+GP++ CAQKV      M+NWV D H EWKDLA K      F+F  M +E   
Subjt:  NILSRLAYSTTLESIKKTIKNLDALVVGIVGFPHALLVWAYECIPLLSGPTMICAQKVSREMPKMINWVADCHLEWKDLAIK------FEFYEMMDER--

Query:  EEALFH
        E  +FH
Subjt:  EEALFH

KAA0060374.1 uncharacterized protein E6C27_scaffold22G001730 [Cucumis melo var. makuwa]5.6e-1450Show/hide
Query:  RLAYSTTLESIKKTIKNLDALVVGIVGFPHALLVWAYECIPLLSGPTMICAQKVSREMPKMINWVADCHLEWKDLA
        R+ Y+  ++SIKK+IKN  AL VGI GF ++LLVW Y+C+PLL  P++ CAQK+      ++NW+ + H EWK+LA
Subjt:  RLAYSTTLESIKKTIKNLDALVVGIVGFPHALLVWAYECIPLLSGPTMICAQKVSREMPKMINWVADCHLEWKDLA

XP_022132727.1 uncharacterized protein LOC111005524 [Momordica charantia]6.6e-1555.13Show/hide
Query:  RLAYSTTLESIKKTIKNLDALVVGIVGFPHALLVWAYECIPLLSGPTMICAQKVSREMPKMINWVADCHLEWKDLAIK
        R++Y  T++ +KK IK+ DA  +GI GFP+ALLVWAYE IPLLS  + + A K+S  MP+M NWVA+ H EW+DL+ K
Subjt:  RLAYSTTLESIKKTIKNLDALVVGIVGFPHALLVWAYECIPLLSGPTMICAQKVSREMPKMINWVADCHLEWKDLAIK

XP_031743197.1 uncharacterized protein LOC101221625 isoform X9 [Cucumis sativus]6.2e-1347.67Show/hide
Query:  RLAYSTTLESIKKTIKNLDALVVGIVGFPHALLVWAYECIPLLSGPTMICAQKVSREMPKMINWVADCHLEWKDLAIKFEFYEMMD
        R++Y  T++ +KK+IK+ DA  +G+ GFP+ALLVWAYE IPLL+  +   A ++S   P+M NW A  H EWKDL+ K    E  D
Subjt:  RLAYSTTLESIKKTIKNLDALVVGIVGFPHALLVWAYECIPLLSGPTMICAQKVSREMPKMINWVADCHLEWKDLAIKFEFYEMMD

XP_038902461.1 zinc finger BED domain-containing protein RICESLEEPER 3-like [Benincasa hispida]4.6e-1653.47Show/hide
Query:  MELSKWLNSDIEEIKVMASRMIAKFEKYWSVIH-GVLARDVSSHSS--IIQKKDRFLKFDEFVNNTAN-ADNVKSELDLYLEENLLPRSDDFEILSWWKL
        +ELSKWLNSD+EE  +  SR I + ++  S I     +R   S+SS  ++ +KDR+LKF+E VNN  N  DNVKSELD YL+E+LLPRSDDF I    KL
Subjt:  MELSKWLNSDIEEIKVMASRMIAKFEKYWSVIH-GVLARDVSSHSS--IIQKKDRFLKFDEFVNNTAN-ADNVKSELDLYLEENLLPRSDDFEILSWWKL

Query:  N
        N
Subjt:  N

TrEMBL top hitse value%identityAlignment
A0A0A0KI50 TF-B3 domain-containing protein3.0e-1347.67Show/hide
Query:  RLAYSTTLESIKKTIKNLDALVVGIVGFPHALLVWAYECIPLLSGPTMICAQKVSREMPKMINWVADCHLEWKDLAIKFEFYEMMD
        R++Y  T++ +KK+IK+ DA  +G+ GFP+ALLVWAYE IPLL+  +   A ++S   P+M NW A  H EWKDL+ K    E  D
Subjt:  RLAYSTTLESIKKTIKNLDALVVGIVGFPHALLVWAYECIPLLSGPTMICAQKVSREMPKMINWVADCHLEWKDLAIKFEFYEMMD

A0A5A7UCM5 Uncharacterized protein8.1e-1951.89Show/hide
Query:  NILSRLAYSTTLESIKKTIKNLDALVVGIVGFPHALLVWAYECIPLLSGPTMICAQKVSREMPKMINWVADCHLEWKDLAIK------FEFYEMMDER--
        +++ RL Y+  ++SIKK+IKNL ALVVGI  F ++LLV  YECIPLL+GP++ CAQKV      M+NWV D H EWKDLA K      F+F  M +E   
Subjt:  NILSRLAYSTTLESIKKTIKNLDALVVGIVGFPHALLVWAYECIPLLSGPTMICAQKVSREMPKMINWVADCHLEWKDLAIK------FEFYEMMDER--

Query:  EEALFH
        E  +FH
Subjt:  EEALFH

A0A5A7UZA2 DUF1985 domain-containing protein2.7e-1450Show/hide
Query:  RLAYSTTLESIKKTIKNLDALVVGIVGFPHALLVWAYECIPLLSGPTMICAQKVSREMPKMINWVADCHLEWKDLA
        R+ Y+  ++SIKK+IKN  AL VGI GF ++LLVW Y+C+PLL  P++ CAQK+      ++NW+ + H EWK+LA
Subjt:  RLAYSTTLESIKKTIKNLDALVVGIVGFPHALLVWAYECIPLLSGPTMICAQKVSREMPKMINWVADCHLEWKDLA

A0A5D3CNI7 TF-B3 domain-containing protein5.1e-1350Show/hide
Query:  RLAYSTTLESIKKTIKNLDALVVGIVGFPHALLVWAYECIPLLSGPTMICAQKVSREMPKMINWVADCHLEWKDLAIK
        R++Y  T++ +KK IK+ DA  +G+ GFP AL VWAYE IPLL+  +   A ++S   P+M NW AD H EWKDL+ K
Subjt:  RLAYSTTLESIKKTIKNLDALVVGIVGFPHALLVWAYECIPLLSGPTMICAQKVSREMPKMINWVADCHLEWKDLAIK

A0A6J1BX50 uncharacterized protein LOC1110055243.2e-1555.13Show/hide
Query:  RLAYSTTLESIKKTIKNLDALVVGIVGFPHALLVWAYECIPLLSGPTMICAQKVSREMPKMINWVADCHLEWKDLAIK
        R++Y  T++ +KK IK+ DA  +GI GFP+ALLVWAYE IPLLS  + + A K+S  MP+M NWVA+ H EW+DL+ K
Subjt:  RLAYSTTLESIKKTIKNLDALVVGIVGFPHALLVWAYECIPLLSGPTMICAQKVSREMPKMINWVADCHLEWKDLAIK

SwissProt top hitse value%identityAlignment
B9FJG3 Zinc finger BED domain-containing protein RICESLEEPER 11.5e-0639.34Show/hide
Query:  ARDVSSHSSIIQKKDRFLKFDEFVNNTANADNVKSELDLYLEENLLPRSDDFEILSWWKLN
        A + S+ ++     D  + FD +++  A +   KSEL+ YL+E+L PR  +F+IL+WWKLN
Subjt:  ARDVSSHSSIIQKKDRFLKFDEFVNNTANADNVKSELDLYLEENLLPRSDDFEILSWWKLN

Q6AVI0 Zinc finger BED domain-containing protein RICESLEEPER 23.4e-0646.81Show/hide
Query:  DRFLKFDEFVNNTANADNVKSELDLYLEENLLPRSDDFEILSWWKLN
        D  + FD +++  A +   KSEL+ YL+E+L PR  +F+IL+WWKLN
Subjt:  DRFLKFDEFVNNTANADNVKSELDLYLEENLLPRSDDFEILSWWKLN

Q75HY5 Zinc finger BED domain-containing protein RICESLEEPER 31.5e-0653.19Show/hide
Query:  DRFLKFDEFVNNTANADNVKSELDLYLEENLLPRSDDFEILSWWKLN
        D  L FD +++  A +    SEL+ YLEE L+PR  DFEIL WWKLN
Subjt:  DRFLKFDEFVNNTANADNVKSELDLYLEENLLPRSDDFEILSWWKLN

Q9M2N5 Zinc finger BED domain-containing protein DAYSLEEPER4.4e-0648.98Show/hide
Query:  KKDRFLKFDEFVNNTANADNVKSELDLYLEENLLPRSDDFEILSWWKLN
        K D    FD ++  T    N+KSELD YL+E LLPR  +F++L WWK N
Subjt:  KKDRFLKFDEFVNNTANADNVKSELDLYLEENLLPRSDDFEILSWWKLN

Arabidopsis top hitse value%identityAlignment
AT3G42170.1 BED zinc finger ;hAT family dimerisation domain3.2e-0748.98Show/hide
Query:  KKDRFLKFDEFVNNTANADNVKSELDLYLEENLLPRSDDFEILSWWKLN
        K D    FD ++  T    N+KSELD YL+E LLPR  +F++L WWK N
Subjt:  KKDRFLKFDEFVNNTANADNVKSELDLYLEENLLPRSDDFEILSWWKLN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TTGGAACTTTCCAAGTGGCTTAACTCTGATATTGAGGAGATAAAAGTGATGGCATCAAGAATGATTGCTAAGTTTGAAAAATATTGGAGTGTGATTCATGGTGTTTTGGC
ACGAGATGTGAGTAGTCATAGCTCTATCATTCAGAAGAAAGATCGGTTTCTCAAGTTTGATGAGTTTGTTAATAATACTGCAAATGCTGATAATGTCAAATCAGAGCTGG
ATCTTTATTTAGAGGAAAATCTTTTACCACGATCAGATGATTTTGAAATTTTGAGTTGGTGGAAGTTAAATGGGGGGGTGGGGACAGGGACGGGGAAGGCTTCCCTGTCC
CCGCCCCGCCCCGTGAACATCCTTAGTCGTCTAGCATATTCCACAACTTTAGAATCTATAAAGAAGACTATAAAGAATTTGGATGCGTTGGTAGTAGGAATAGTTGGATT
CCCACATGCACTGTTGGTCTGGGCATATGAGTGCATCCCTCTCCTATCTGGACCCACGATGATTTGTGCCCAAAAGGTGTCAAGAGAGATGCCCAAAATGATCAACTGGG
TTGCTGATTGCCATCTAGAGTGGAAGGACTTGGCAATTAAGTTTGAGTTCTATGAGATGATGGATGAAAGAGAAGAAGCTTTGTTCCATGGTGGGAACAACTGA
mRNA sequenceShow/hide mRNA sequence
TTGGAACTTTCCAAGTGGCTTAACTCTGATATTGAGGAGATAAAAGTGATGGCATCAAGAATGATTGCTAAGTTTGAAAAATATTGGAGTGTGATTCATGGTGTTTTGGC
ACGAGATGTGAGTAGTCATAGCTCTATCATTCAGAAGAAAGATCGGTTTCTCAAGTTTGATGAGTTTGTTAATAATACTGCAAATGCTGATAATGTCAAATCAGAGCTGG
ATCTTTATTTAGAGGAAAATCTTTTACCACGATCAGATGATTTTGAAATTTTGAGTTGGTGGAAGTTAAATGGGGGGGTGGGGACAGGGACGGGGAAGGCTTCCCTGTCC
CCGCCCCGCCCCGTGAACATCCTTAGTCGTCTAGCATATTCCACAACTTTAGAATCTATAAAGAAGACTATAAAGAATTTGGATGCGTTGGTAGTAGGAATAGTTGGATT
CCCACATGCACTGTTGGTCTGGGCATATGAGTGCATCCCTCTCCTATCTGGACCCACGATGATTTGTGCCCAAAAGGTGTCAAGAGAGATGCCCAAAATGATCAACTGGG
TTGCTGATTGCCATCTAGAGTGGAAGGACTTGGCAATTAAGTTTGAGTTCTATGAGATGATGGATGAAAGAGAAGAAGCTTTGTTCCATGGTGGGAACAACTGA
Protein sequenceShow/hide protein sequence
MELSKWLNSDIEEIKVMASRMIAKFEKYWSVIHGVLARDVSSHSSIIQKKDRFLKFDEFVNNTANADNVKSELDLYLEENLLPRSDDFEILSWWKLNGGVGTGTGKASLS
PPRPVNILSRLAYSTTLESIKKTIKNLDALVVGIVGFPHALLVWAYECIPLLSGPTMICAQKVSREMPKMINWVADCHLEWKDLAIKFEFYEMMDEREEALFHGGNN