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Lag0032298 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0032298
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionCCHC-type domain-containing protein
Genome locationchr11:29871871..29872425
RNA-Seq ExpressionLag0032298
SyntenyLag0032298
Gene Ontology termsNA
InterPro domainsIPR036691 - Endonuclease/exonuclease/phosphatase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF4347816.1 hypothetical protein G4B88_012929 [Cannabis sativa]8.0e-3045.34Show/hide
Query:  WRFSGFYGNPIADKRVDSWVLLKILCEM-DQNKLPWILWGDFNEIMFNHEKKGGAERNPKLMDNFVEALDHCNLKDVGFFGNKFTWARGKKNEARIRERL
        WRF+GFYGNP A  R +SW   ++LC + D   LPWI  GDFNEI+  +EKKGG++R+   M  F  ALD C+L D+GF G  FTW   ++  A ++ERL
Subjt:  WRFSGFYGNPIADKRVDSWVLLKILCEM-DQNKLPWILWGDFNEIMFNHEKKGGAERNPKLMDNFVEALDHCNLKDVGFFGNKFTWARGKKNEARIRERL

Query:  DRFFVNQPMADLFKSIKVTHLKFHGSDNRPIMAMMTMEELAVRNSKVRNLLRFGESWTSLE
        DR+F NQ   DLF  +KV +  F  SD+RPI+A +             N+ R   SW SL+
Subjt:  DRFFVNQPMADLFKSIKVTHLKFHGSDNRPIMAMMTMEELAVRNSKVRNLLRFGESWTSLE

KAF4351405.1 hypothetical protein F8388_001025, partial [Cannabis sativa]3.6e-3043.64Show/hide
Query:  WRFSGFYGNPIADKRVDSWVLLKILCEM-DQNKLPWILWGDFNEIMFNHEKKGGAERNPKLMDNFVEALDHCNLKDVGFFGNKFTWARGKKNEARIRERL
        WRF+GFYGNP A  R+DSW   ++LC +     LPWI  GDFNEI+  +EKKGG +R+   + +F +ALD C+L D+GF G  FTW   ++  A ++ERL
Subjt:  WRFSGFYGNPIADKRVDSWVLLKILCEM-DQNKLPWILWGDFNEIMFNHEKKGGAERNPKLMDNFVEALDHCNLKDVGFFGNKFTWARGKKNEARIRERL

Query:  DRFFVNQPMADLFKSIKVTHLKFHGSDNRPIMAMMTMEELAVRNSKVRNLLRFGESWTSLEETKD
        DR+F NQ   +LF S+KV +  F  SD+RPI A++    +  R    +   RF   W    E +D
Subjt:  DRFFVNQPMADLFKSIKVTHLKFHGSDNRPIMAMMTMEELAVRNSKVRNLLRFGESWTSLEETKD

KAF4381998.1 hypothetical protein G4B88_006630 [Cannabis sativa]6.1e-3044.85Show/hide
Query:  WRFSGFYGNPIADKRVDSWVLLKILCEM-DQNKLPWILWGDFNEIMFNHEKKGGAERNPKLMDNFVEALDHCNLKDVGFFGNKFTWARGKKNEARIRERL
        WRF+GFYGNP A  R +SW   ++LC + D   LPWI  GDFNEI+  +EKKGG++R+   M  F  ALD C+L D+GF G  FTW   ++  A ++ERL
Subjt:  WRFSGFYGNPIADKRVDSWVLLKILCEM-DQNKLPWILWGDFNEIMFNHEKKGGAERNPKLMDNFVEALDHCNLKDVGFFGNKFTWARGKKNEARIRERL

Query:  DRFFVNQPMADLFKSIKVTHLKFHGSDNRPIMAMMTMEELAVRNSKVRNLLRFGESWTSLEETKD
        DR+F NQ   DLF  +KV +  F  SD+RPI+A +       R  K R   RF   W    E ++
Subjt:  DRFFVNQPMADLFKSIKVTHLKFHGSDNRPIMAMMTMEELAVRNSKVRNLLRFGESWTSLEETKD

KAF4383622.1 hypothetical protein F8388_014122 [Cannabis sativa]6.1e-3044.85Show/hide
Query:  WRFSGFYGNPIADKRVDSWVLLKILCEM-DQNKLPWILWGDFNEIMFNHEKKGGAERNPKLMDNFVEALDHCNLKDVGFFGNKFTWARGKKNEARIRERL
        WRF+GFYGNP A  R +SW   ++LC + D   LPWI  GDFNEI+  +EKKGG++R+   M  F  ALD C+L D+GF G  FTW   ++  A ++ERL
Subjt:  WRFSGFYGNPIADKRVDSWVLLKILCEM-DQNKLPWILWGDFNEIMFNHEKKGGAERNPKLMDNFVEALDHCNLKDVGFFGNKFTWARGKKNEARIRERL

Query:  DRFFVNQPMADLFKSIKVTHLKFHGSDNRPIMAMMTMEELAVRNSKVRNLLRFGESWTSLEETKD
        DR+F NQ   DLF  +KV +  F  SD+RPI+A +       R  K R   RF   W    E ++
Subjt:  DRFFVNQPMADLFKSIKVTHLKFHGSDNRPIMAMMTMEELAVRNSKVRNLLRFGESWTSLEETKD

XP_022155286.1 uncharacterized protein LOC111022423 [Momordica charantia]7.3e-3144.05Show/hide
Query:  RCEWRFSGFYGNPIADKRVDSWVLLKILCEMDQNKLPWILWGDFNEIMFNHEKKGGAERNPKLMDNFVEALDHCNLKDVGFFGNKFTWARGKKNEARIRE
        R  WRF+G YG+ + D R ++W L+  L  +    LPWIL GDFNEI+FN EK  G  R   LM NF + LD C L D GF G+ FTW  G K    I E
Subjt:  RCEWRFSGFYGNPIADKRVDSWVLLKILCEMDQNKLPWILWGDFNEIMFNHEKKGGAERNPKLMDNFVEALDHCNLKDVGFFGNKFTWARGKKNEARIRE

Query:  RLDRFFVNQPMADLFKSIKVTHLKFHGSDNRPIMA-MMTMEELAVRNSKVRNLLRFGESWTSLEETKD
        RLDRF +N  +  + +++++ HL+F  SD+RPI+A  + + E  V   K R   RF E W S +E K+
Subjt:  RLDRFFVNQPMADLFKSIKVTHLKFHGSDNRPIMA-MMTMEELAVRNSKVRNLLRFGESWTSLEETKD

TrEMBL top hitse value%identityAlignment
A0A6J1DRA0 uncharacterized protein LOC1110224233.5e-3144.05Show/hide
Query:  RCEWRFSGFYGNPIADKRVDSWVLLKILCEMDQNKLPWILWGDFNEIMFNHEKKGGAERNPKLMDNFVEALDHCNLKDVGFFGNKFTWARGKKNEARIRE
        R  WRF+G YG+ + D R ++W L+  L  +    LPWIL GDFNEI+FN EK  G  R   LM NF + LD C L D GF G+ FTW  G K    I E
Subjt:  RCEWRFSGFYGNPIADKRVDSWVLLKILCEMDQNKLPWILWGDFNEIMFNHEKKGGAERNPKLMDNFVEALDHCNLKDVGFFGNKFTWARGKKNEARIRE

Query:  RLDRFFVNQPMADLFKSIKVTHLKFHGSDNRPIMA-MMTMEELAVRNSKVRNLLRFGESWTSLEETKD
        RLDRF +N  +  + +++++ HL+F  SD+RPI+A  + + E  V   K R   RF E W S +E K+
Subjt:  RLDRFFVNQPMADLFKSIKVTHLKFHGSDNRPIMA-MMTMEELAVRNSKVRNLLRFGESWTSLEETKD

A0A7J6DPD3 CCHC-type domain-containing protein3.9e-3045.34Show/hide
Query:  WRFSGFYGNPIADKRVDSWVLLKILCEM-DQNKLPWILWGDFNEIMFNHEKKGGAERNPKLMDNFVEALDHCNLKDVGFFGNKFTWARGKKNEARIRERL
        WRF+GFYGNP A  R +SW   ++LC + D   LPWI  GDFNEI+  +EKKGG++R+   M  F  ALD C+L D+GF G  FTW   ++  A ++ERL
Subjt:  WRFSGFYGNPIADKRVDSWVLLKILCEM-DQNKLPWILWGDFNEIMFNHEKKGGAERNPKLMDNFVEALDHCNLKDVGFFGNKFTWARGKKNEARIRERL

Query:  DRFFVNQPMADLFKSIKVTHLKFHGSDNRPIMAMMTMEELAVRNSKVRNLLRFGESWTSLE
        DR+F NQ   DLF  +KV +  F  SD+RPI+A +             N+ R   SW SL+
Subjt:  DRFFVNQPMADLFKSIKVTHLKFHGSDNRPIMAMMTMEELAVRNSKVRNLLRFGESWTSLE

A0A7J6DZ24 CCHC-type domain-containing protein1.7e-3043.64Show/hide
Query:  WRFSGFYGNPIADKRVDSWVLLKILCEM-DQNKLPWILWGDFNEIMFNHEKKGGAERNPKLMDNFVEALDHCNLKDVGFFGNKFTWARGKKNEARIRERL
        WRF+GFYGNP A  R+DSW   ++LC +     LPWI  GDFNEI+  +EKKGG +R+   + +F +ALD C+L D+GF G  FTW   ++  A ++ERL
Subjt:  WRFSGFYGNPIADKRVDSWVLLKILCEM-DQNKLPWILWGDFNEIMFNHEKKGGAERNPKLMDNFVEALDHCNLKDVGFFGNKFTWARGKKNEARIRERL

Query:  DRFFVNQPMADLFKSIKVTHLKFHGSDNRPIMAMMTMEELAVRNSKVRNLLRFGESWTSLEETKD
        DR+F NQ   +LF S+KV +  F  SD+RPI A++    +  R    +   RF   W    E +D
Subjt:  DRFFVNQPMADLFKSIKVTHLKFHGSDNRPIMAMMTMEELAVRNSKVRNLLRFGESWTSLEETKD

A0A7J6GGL8 CCHC-type domain-containing protein3.0e-3044.85Show/hide
Query:  WRFSGFYGNPIADKRVDSWVLLKILCEM-DQNKLPWILWGDFNEIMFNHEKKGGAERNPKLMDNFVEALDHCNLKDVGFFGNKFTWARGKKNEARIRERL
        WRF+GFYGNP A  R +SW   ++LC + D   LPWI  GDFNEI+  +EKKGG++R+   M  F  ALD C+L D+GF G  FTW   ++  A ++ERL
Subjt:  WRFSGFYGNPIADKRVDSWVLLKILCEM-DQNKLPWILWGDFNEIMFNHEKKGGAERNPKLMDNFVEALDHCNLKDVGFFGNKFTWARGKKNEARIRERL

Query:  DRFFVNQPMADLFKSIKVTHLKFHGSDNRPIMAMMTMEELAVRNSKVRNLLRFGESWTSLEETKD
        DR+F NQ   DLF  +KV +  F  SD+RPI+A +       R  K R   RF   W    E ++
Subjt:  DRFFVNQPMADLFKSIKVTHLKFHGSDNRPIMAMMTMEELAVRNSKVRNLLRFGESWTSLEETKD

A0A7J6GL46 CCHC-type domain-containing protein3.0e-3044.85Show/hide
Query:  WRFSGFYGNPIADKRVDSWVLLKILCEM-DQNKLPWILWGDFNEIMFNHEKKGGAERNPKLMDNFVEALDHCNLKDVGFFGNKFTWARGKKNEARIRERL
        WRF+GFYGNP A  R +SW   ++LC + D   LPWI  GDFNEI+  +EKKGG++R+   M  F  ALD C+L D+GF G  FTW   ++  A ++ERL
Subjt:  WRFSGFYGNPIADKRVDSWVLLKILCEM-DQNKLPWILWGDFNEIMFNHEKKGGAERNPKLMDNFVEALDHCNLKDVGFFGNKFTWARGKKNEARIRERL

Query:  DRFFVNQPMADLFKSIKVTHLKFHGSDNRPIMAMMTMEELAVRNSKVRNLLRFGESWTSLEETKD
        DR+F NQ   DLF  +KV +  F  SD+RPI+A +       R  K R   RF   W    E ++
Subjt:  DRFFVNQPMADLFKSIKVTHLKFHGSDNRPIMAMMTMEELAVRNSKVRNLLRFGESWTSLEETKD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTACCATCAGTTCGGACGAGGTGCGAGTGGAGATTTAGTGGTTTCTATGGGAATCCTATAGCTGACAAAAGGGTTGACTCGTGGGTGCTTTTAAAAATACTTTGTGA
GATGGACCAGAATAAGCTCCCGTGGATTTTATGGGGAGACTTTAATGAGATCATGTTCAACCATGAGAAAAAGGGAGGGGCCGAGAGAAATCCAAAGCTTATGGATAACT
TTGTGGAGGCTTTGGATCATTGTAATCTTAAGGACGTTGGATTTTTTGGTAATAAATTTACGTGGGCCAGGGGCAAGAAAAACGAGGCAAGAATTAGAGAAAGATTAGAT
AGATTTTTTGTGAACCAACCTATGGCCGACTTGTTCAAAAGCATAAAGGTAACACATCTTAAGTTCCATGGATCAGACAATAGACCAATTATGGCCATGATGACCATGGA
AGAGCTTGCGGTGAGAAATTCTAAAGTGAGAAATCTGTTGAGATTTGGGGAGTCGTGGACGAGTTTGGAAGAGACCAAAGACTGTTGGGTTTTATGTCCTAAAACTCGTA
GATAG
mRNA sequenceShow/hide mRNA sequence
ATGCTACCATCAGTTCGGACGAGGTGCGAGTGGAGATTTAGTGGTTTCTATGGGAATCCTATAGCTGACAAAAGGGTTGACTCGTGGGTGCTTTTAAAAATACTTTGTGA
GATGGACCAGAATAAGCTCCCGTGGATTTTATGGGGAGACTTTAATGAGATCATGTTCAACCATGAGAAAAAGGGAGGGGCCGAGAGAAATCCAAAGCTTATGGATAACT
TTGTGGAGGCTTTGGATCATTGTAATCTTAAGGACGTTGGATTTTTTGGTAATAAATTTACGTGGGCCAGGGGCAAGAAAAACGAGGCAAGAATTAGAGAAAGATTAGAT
AGATTTTTTGTGAACCAACCTATGGCCGACTTGTTCAAAAGCATAAAGGTAACACATCTTAAGTTCCATGGATCAGACAATAGACCAATTATGGCCATGATGACCATGGA
AGAGCTTGCGGTGAGAAATTCTAAAGTGAGAAATCTGTTGAGATTTGGGGAGTCGTGGACGAGTTTGGAAGAGACCAAAGACTGTTGGGTTTTATGTCCTAAAACTCGTA
GATAG
Protein sequenceShow/hide protein sequence
MLPSVRTRCEWRFSGFYGNPIADKRVDSWVLLKILCEMDQNKLPWILWGDFNEIMFNHEKKGGAERNPKLMDNFVEALDHCNLKDVGFFGNKFTWARGKKNEARIRERLD
RFFVNQPMADLFKSIKVTHLKFHGSDNRPIMAMMTMEELAVRNSKVRNLLRFGESWTSLEETKDCWVLCPKTRR