CuGenDBv2

Gene ID	Lag0032301
Organism	Luffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Description	late embryogenesis abundant protein At5g17165-like
Genome location	chr11:30025486..30029842
RNA-Seq Expression	Lag0032301
Synteny	Lag0032301
Gene Ontology terms	NA
InterPro domains	IPR039291 - Late embryogenesis abundant protein At5g17165-like

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG6605657.1 ATP-dependent DNA helicase SRS2-like protein, partial [Cucurbita argyrosperma subsp. sororia]

7.7e-42

72.95

Show/hide

Query:  MAATSKLIIIARP-LAHLRKP--HPFSSVFTLRAGHWSAYEKNPEEQICPTVVPDHVIHSLSENYWVPHPETGVFGPQTTHHSSVPNDTSAGGGGHKEGS
        MAA S LII ARP LAH R P      S+FTLRAGHWSAYEKNPEE++CPTVVPDH++HSLSE+YW PHP+TGVFGP TT H+ VP+DTS  GGG KEGS
Subjt:  MAATSKLIIIARP-LAHLRKP--HPFSSVFTLRAGHWSAYEKNPEEQICPTVVPDHVIHSLSENYWVPHPETGVFGPQTTHHSSVPNDTSAGGGGHKEGS

Query:  VLELKAWFRHNGLEDSEKPHFL
        VLELK WFRH  LED EKPH L
Subjt:  VLELKAWFRHNGLEDSEKPHFL

XP_022957877.1 late embryogenesis abundant protein At5g17165-like [Cucurbita moschata]

5.2e-38

73.68

Show/hide

Query:  MAATSKLIIIARP-LAHLRKP--HPFSSVFTLRAGHWSAYEKNPEEQICPTVVPDHVIHSLSENYWVPHPETGVFGPQTTHHSSVPNDTSAGGGGHKEGS
        MAA S LII ARP LAHLR P      S+FTLRAGHWSAYEKNPEE++CPTVVPDH+IHSLSE+YW PHP+TGVFGP  T H+ VP+DTSAGG   KEGS
Subjt:  MAATSKLIIIARP-LAHLRKP--HPFSSVFTLRAGHWSAYEKNPEEQICPTVVPDHVIHSLSENYWVPHPETGVFGPQTTHHSSVPNDTSAGGGGHKEGS

Query:  VLELKAWFRHNGLE
        VLELK WFRH  LE
Subjt:  VLELKAWFRHNGLE

XP_022995249.1 late embryogenesis abundant protein At5g17165-like [Cucurbita maxima]

5.0e-41

72.13

Show/hide

Query:  MAATSKLIIIARP-LAHLRKP--HPFSSVFTLRAGHWSAYEKNPEEQICPTVVPDHVIHSLSENYWVPHPETGVFGPQTTHHSSVPNDTSAGGGGHKEGS
        MAA S LII ARP LAHLR P      S+FTLRAGHWSAYEKNPEE++CPTVVPDH+IHS+SE+YW PHP+TGVFGP  + H+ VP+DTSAGG   KEGS
Subjt:  MAATSKLIIIARP-LAHLRKP--HPFSSVFTLRAGHWSAYEKNPEEQICPTVVPDHVIHSLSENYWVPHPETGVFGPQTTHHSSVPNDTSAGGGGHKEGS

Query:  VLELKAWFRHNGLEDSEKPHFL
        VLELK WFRH  LED EKPH L
Subjt:  VLELKAWFRHNGLEDSEKPHFL

XP_023532525.1 late embryogenesis abundant protein At5g17165-like [Cucurbita pepo subsp. pepo]

1.3e-41

72.95

Show/hide

Query:  MAATSKLIIIARP-LAHLRKP--HPFSSVFTLRAGHWSAYEKNPEEQICPTVVPDHVIHSLSENYWVPHPETGVFGPQTTHHSSVPNDTSAGGGGHKEGS
        MAA S LII ARP LAHLR P      S+FTLRAGHWSAYEKNPEE++CPTVVPDH+IHS+SE+YW PHP+TGVFGP  T H+ VP+DTSAGG   KEGS
Subjt:  MAATSKLIIIARP-LAHLRKP--HPFSSVFTLRAGHWSAYEKNPEEQICPTVVPDHVIHSLSENYWVPHPETGVFGPQTTHHSSVPNDTSAGGGGHKEGS

Query:  VLELKAWFRHNGLEDSEKPHFL
        VLELK WFRH  LED EKPH L
Subjt:  VLELKAWFRHNGLEDSEKPHFL

XP_038875585.1 late embryogenesis abundant protein At5g17165-like [Benincasa hispida]

1.0e-33

67.2

Show/hide

Query:  ATSKLIIIARPLAHLRKP-------HPF-SSVFTLRAGHWSAYEKNPEEQICPTVVPDHVIH-SLSENYWVPHPETGVFGPQTTHH--SSVPNDTSAGGG
        A+S  IIIA P   L  P       H F S+ F LRA HWSAYEKNPEEQI PTVVPDHVIH ++SENYW PHPETGVFGP   H   S+VPNDTSAGG 
Subjt:  ATSKLIIIARPLAHLRKP-------HPF-SSVFTLRAGHWSAYEKNPEEQICPTVVPDHVIH-SLSENYWVPHPETGVFGPQTTHH--SSVPNDTSAGGG

Query:  GHKEGSVLELKAWFRHNGLEDSEKP
          KE SVL++KAWFRHNGLED EKP
Subjt:  GHKEGSVLELKAWFRHNGLEDSEKP

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KRJ5 Uncharacterized protein

1.6e-32

62.79

Show/hide

Query:  MAATSKLII---IARPLAHLRKPH----PFSSVFTLRAGHWSAYEKNPEEQICPTVVPDHVI-HSLSENYWVPHPETGVFGPQTTHH--SSVPNDTSAGG
        MA +SK+I+    A P   L  PH    PF + F  R+ HWSAYEKN E+QI PT+VP+H+I   LSE+YWVPHPETGVFGP   HH  S+VPNDTSAGG
Subjt:  MAATSKLII---IARPLAHLRKPH----PFSSVFTLRAGHWSAYEKNPEEQICPTVVPDHVI-HSLSENYWVPHPETGVFGPQTTHH--SSVPNDTSAGG

Query:  GGHKEGSVLELKAWFRHNGLEDSEKPHFL
            EGSVL LKAWFRHNGLED EKPH L
Subjt:  GGHKEGSVLELKAWFRHNGLEDSEKPHFL

A0A1S4E6U6 uncharacterized protein LOC103504694

7.3e-30

61.16

Show/hide

Query:  AATSKLIIIARPLAHLRKPHPFSSVFTLRAGHWSAYEKNPEEQICPTVVPDHVI-HSLSENYWVPHPETGVFGPQTTHH--SSVPNDTSAGGGGHKEGSV
        AA  +L ++     HL    PF++    RA HWSAYEKN E+ I PT+VP+ VI H+LS+NYWVPHP+TGVFGP   HH  S++PNDTSAGG    EGSV
Subjt:  AATSKLIIIARPLAHLRKPHPFSSVFTLRAGHWSAYEKNPEEQICPTVVPDHVI-HSLSENYWVPHPETGVFGPQTTHH--SSVPNDTSAGGGGHKEGSV

Query:  LELKAWFRHNGLEDSEKPHFL
        L LKAWFRHNGLED EKPH L
Subjt:  LELKAWFRHNGLEDSEKPHFL

A0A5A7UIY1 Uncharacterized protein

1.5e-30

58.33

Show/hide

Query:  MAATSKLIIIARPLAHL--------RKPH--PFSSVFTLRAGHWSAYEKNPEEQICPTVVPDHVI-HSLSENYWVPHPETGVFGPQTTHH--SSVPNDTS
        MA +SK+I++A   A            PH  PF++    RA HWSAYEKN E+ I PT+VP+ VI H+LS+NYWVPHP+TGVFGP   HH  S++PNDTS
Subjt:  MAATSKLIIIARPLAHL--------RKPH--PFSSVFTLRAGHWSAYEKNPEEQICPTVVPDHVI-HSLSENYWVPHPETGVFGPQTTHH--SSVPNDTS

Query:  AGGGGHKEGSVLELKAWFRHNGLEDSEKPHFL
        A  GG++ GSVL LKAWFRHNGLED EKPH L
Subjt:  AGGGGHKEGSVLELKAWFRHNGLEDSEKPHFL

A0A6J1H0D3 late embryogenesis abundant protein At5g17165-like

2.5e-38

73.68

Show/hide

Query:  MAATSKLIIIARP-LAHLRKP--HPFSSVFTLRAGHWSAYEKNPEEQICPTVVPDHVIHSLSENYWVPHPETGVFGPQTTHHSSVPNDTSAGGGGHKEGS
        MAA S LII ARP LAHLR P      S+FTLRAGHWSAYEKNPEE++CPTVVPDH+IHSLSE+YW PHP+TGVFGP  T H+ VP+DTSAGG   KEGS
Subjt:  MAATSKLIIIARP-LAHLRKP--HPFSSVFTLRAGHWSAYEKNPEEQICPTVVPDHVIHSLSENYWVPHPETGVFGPQTTHHSSVPNDTSAGGGGHKEGS

Query:  VLELKAWFRHNGLE
        VLELK WFRH  LE
Subjt:  VLELKAWFRHNGLE

A0A6J1K564 late embryogenesis abundant protein At5g17165-like

2.4e-41

72.13

Show/hide

Query:  MAATSKLIIIARP-LAHLRKP--HPFSSVFTLRAGHWSAYEKNPEEQICPTVVPDHVIHSLSENYWVPHPETGVFGPQTTHHSSVPNDTSAGGGGHKEGS
        MAA S LII ARP LAHLR P      S+FTLRAGHWSAYEKNPEE++CPTVVPDH+IHS+SE+YW PHP+TGVFGP  + H+ VP+DTSAGG   KEGS
Subjt:  MAATSKLIIIARP-LAHLRKP--HPFSSVFTLRAGHWSAYEKNPEEQICPTVVPDHVIHSLSENYWVPHPETGVFGPQTTHHSSVPNDTSAGGGGHKEGS

Query:  VLELKAWFRHNGLEDSEKPHFL
        VLELK WFRH  LED EKPH L
Subjt:  VLELKAWFRHNGLEDSEKPHFL

SwissProt top hits

e value

%identity

Alignment

F4KFM8 Late embryogenesis abundant protein At5g17165

6.2e-18

45.38

Show/hide

Query:  MAATSKLI-IIARPLAH-LRKPHPFSSVFTLRAGHWSAYEKNPEEQICPTVVPDHVIHSLSENYWVPHPETGVFGPQTTHHSSVPNDTSAGGGGHKEGSV
        MAA SK I ++ R + + +R       +FT R  H SAY+KN EE++ P+ VPD +I   S+ YW PHP+TGVFGP ++  S+   D   GG   +E SV
Subjt:  MAATSKLI-IIARPLAH-LRKPHPFSSVFTLRAGHWSAYEKNPEEQICPTVVPDHVIHSLSENYWVPHPETGVFGPQTTHHSSVPNDTSAGGGGHKEGSV

Query:  LELKAWFRHNGLEDSEKPH
        +E KAWFR   LED +K H
Subjt:  LELKAWFRHNGLEDSEKPH

Arabidopsis top hits

e value

%identity

Alignment

AT3G03150.1 unknown protein

3.0e-20

51.14

Show/hide

Query:  RAGHWSAYEKNPEEQICPTVVPDHVIHSLSENYWVPHPETGVFGPQTTHHSSVPNDTSAGGGGHKEGSVLELKAWFRHNGLEDSEKPH
        R+GH SAY+KN E+++  + VPD VI   S+ YW PHP+TGVFGP TT HS+         G H++ +VLE  AWFR   LEDS+K H
Subjt:  RAGHWSAYEKNPEEQICPTVVPDHVIHSLSENYWVPHPETGVFGPQTTHHSSVPNDTSAGGGGHKEGSVLELKAWFRHNGLEDSEKPH

AT5G17165.1 unknown protein

4.4e-19

45.38

Show/hide

Query:  MAATSKLI-IIARPLAH-LRKPHPFSSVFTLRAGHWSAYEKNPEEQICPTVVPDHVIHSLSENYWVPHPETGVFGPQTTHHSSVPNDTSAGGGGHKEGSV
        MAA SK I ++ R + + +R       +FT R  H SAY+KN EE++ P+ VPD +I   S+ YW PHP+TGVFGP ++  S+   D   GG   +E SV
Subjt:  MAATSKLI-IIARPLAH-LRKPHPFSSVFTLRAGHWSAYEKNPEEQICPTVVPDHVIHSLSENYWVPHPETGVFGPQTTHHSSVPNDTSAGGGGHKEGSV

Query:  LELKAWFRHNGLEDSEKPH
        +E KAWFR   LED +K H
Subjt:  LELKAWFRHNGLEDSEKPH

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGCCGCCACTTCGAAGCTTATTATTATTGCTCGACCACTCGCTCATTTGCGGAAGCCACACCCTTTTTCTTCGGTTTTCACCCTCCGGGCAGGTCATTGGTCAGCATA
TGAGAAGAATCCAGAGGAGCAAATCTGCCCAACAGTGGTACCAGACCATGTGATCCACTCTCTATCTGAAAACTACTGGGTCCCACATCCTGAAACCGGAGTTTTTGGGC
CACAAACAACTCACCACAGTTCTGTTCCAAACGACACGTCGGCTGGTGGGGGCGGCCATAAAGAGGGCTCGGTTCTGGAACTCAAGGCTTGGTTCCGACACAACGGCCTC
GAGGACTCTGAGAAGCCACATTTTCTGTAA

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MAATSKLIIIARPLAHLRKPHPFSSVFTLRAGHWSAYEKNPEEQICPTVVPDHVIHSLSENYWVPHPETGVFGPQTTHHSSVPNDTSAGGGGHKEGSVLELKAWFRHNGL
EDSEKPHFL

Lag0032301 (gene) of Sponge gourd (AG-4) v1 genome