; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0032302 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0032302
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRetrovirus-related Pol polyprotein from transposon TNT 1-94
Genome locationchr11:30082856..30083581
RNA-Seq ExpressionLag0032302
SyntenyLag0032302
Gene Ontology termsGO:0046872 - metal ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_038880370.1 uncharacterized protein LOC120072018 [Benincasa hispida]6.3e-5965.7Show/hide
Query:  MSITRYDIEKFDGKNDFELWKVKIKAILGQQKAIKAINDPAKLPISMTKDEKENMELAARGTIVLNLTHSVLRQIIDQETTFKMWSKLDEIYLNKDLPNK
        M+  RY+IEKFDGK DFEL K KIKA+LGQQK + AI DP K P ++++ +KE +EL A GTI+LN+T S+LRQI+DQ T + +W+KL+EIYLNKDLPNK
Subjt:  MSITRYDIEKFDGKNDFELWKVKIKAILGQQKAIKAINDPAKLPISMTKDEKENMELAARGTIVLNLTHSVLRQIIDQETTFKMWSKLDEIYLNKDLPNK

Query:  SFIRERYFTYRMDASKSLTDNLDDFKRLSSEFKSLGDKIGEENETFILLNSLPNAYKEVKVAMKYGREKITT
        +F RER+FTY++DA+KSLTDNL++FKRLSSEF+S+ D I EENE FILLNSLP ++K+VK  +KYGRE+ITT
Subjt:  SFIRERYFTYRMDASKSLTDNLDDFKRLSSEFKSLGDKIGEENETFILLNSLPNAYKEVKVAMKYGREKITT

XP_038885928.1 uncharacterized protein LOC120076236 [Benincasa hispida]6.7e-6962.44Show/hide
Query:  MSITRYDIEKFDGKNDFELWKVKIKAILGQQKAIKAINDPAKLPISMTKDEKENMELAARGTIVLNLTHSVLRQIIDQETTFKMWSKLDEIYLNKDLPNK
        M+ TRY+IEKF+ K DFELWK KIK +L +QKA+ AI DPAK P  + K EKE +E  A GTIVLN+  SVLRQI+D+ T + +W+KL++IYLNKDLPNK
Subjt:  MSITRYDIEKFDGKNDFELWKVKIKAILGQQKAIKAINDPAKLPISMTKDEKENMELAARGTIVLNLTHSVLRQIIDQETTFKMWSKLDEIYLNKDLPNK

Query:  SFIRERYFTYRMDASKSLTDNLDDFKRLSSEFKSLGDKIGEENETFILLNSLPNAYKEVKVAMKYGREKITTDAIMLAIKVRELEMQVSKKEQQSVEGLF
        +F+RER+FTY+MD +KSLTDNL++FK LSS+F+S+GD IGEENE FILLNSLP  +K+VK A+KYGRE+ITT AI+ A+ V+ELE+Q++KK+Q   EG F
Subjt:  SFIRERYFTYRMDASKSLTDNLDDFKRLSSEFKSLGDKIGEENETFILLNSLPNAYKEVKVAMKYGREKITTDAIMLAIKVRELEMQVSKKEQQSVEGLF

Query:  SKGKTKNNGRDNK
         KG  K  GR N+
Subjt:  SKGKTKNNGRDNK

XP_038887098.1 uncharacterized protein LOC120077280 [Benincasa hispida]2.6e-6560.56Show/hide
Query:  MSITRYDIEKFDGKNDFELWKVKIKAILGQQKAIKAINDPAKLPISMTKDEKENMELAARGTIVLNLTHSVLRQIIDQETTFKMWSKLDEIYLNKDLPNK
        M+ T+Y+IEKFD K DFEL K KIKA+LGQQKA+ AI DP+K P ++++ EKE +E  A GTI+LN+T SVLRQI+DQ T + +W+KL+EIYLNKD PNK
Subjt:  MSITRYDIEKFDGKNDFELWKVKIKAILGQQKAIKAINDPAKLPISMTKDEKENMELAARGTIVLNLTHSVLRQIIDQETTFKMWSKLDEIYLNKDLPNK

Query:  SFIRERYFTYRMDASKSLTDNLDDFKRLSSEFKSLGDKIGEENETFILLNSLPNAYKEVKVAMKYGREKITTDAIMLAIKVRELEMQVSKKEQQSVEGLF
        +F+RER+FTY+MD +KSLTDNL++FKRLSSEF+S+GD IGEENE FIL NSLP  +K+VK A+KY R++IT DAI+ A++V+ELE+Q+  +E   V+   
Subjt:  SFIRERYFTYRMDASKSLTDNLDDFKRLSSEFKSLGDKIGEENETFILLNSLPNAYKEVKVAMKYGREKITTDAIMLAIKVRELEMQVSKKEQQSVEGLF

Query:  SKGKTKNNGRDNK
         KG+T+  GR N+
Subjt:  SKGKTKNNGRDNK

XP_038889933.1 uncharacterized protein LOC120079695 [Benincasa hispida]4.5e-5765.68Show/hide
Query:  MSITRYDIEKFDGKNDFELWKVKIKAILGQQKAIKAINDPAKLPISMTKDEKENMELAARGTIVLNLTHSVLRQIIDQETTFKMWSKLDEIYLNKDLPNK
        M+ TR++IEKFDGK DFELWK KIKA+LGQQKA+ AI D  K P + T  EKE +E+ A GTIVLN+T +VLRQI+D++T F +W+KL+EIYLNKDL NK
Subjt:  MSITRYDIEKFDGKNDFELWKVKIKAILGQQKAIKAINDPAKLPISMTKDEKENMELAARGTIVLNLTHSVLRQIIDQETTFKMWSKLDEIYLNKDLPNK

Query:  SFIRERYFTYRMDASKSLTDNLDDFKRLSSEFKSLGDKIGEENETFILLNSLPNAYKEVKVAMKYGREK
        +F R+R+FTY+MD +KSLT+NL++FKRLS EF+S+GD IGEENE FILLNSLP+++K+VK  MKYGR++
Subjt:  SFIRERYFTYRMDASKSLTDNLDDFKRLSSEFKSLGDKIGEENETFILLNSLPNAYKEVKVAMKYGREK

XP_038890043.1 uncharacterized protein LOC120079747 [Benincasa hispida]1.2e-7367.79Show/hide
Query:  MSITRYDIEKFDGKNDFELWKVKIKAILGQQKAIKAINDPAKLPISMTKDEKENMELAARGTIVLNLTHSVLRQIIDQETTFKMWSKLDEIYLNKDLPNK
        M+ TRY+IEKFD K DFELWKVKIK +LGQQKA+ AI DPAK P ++T+ EKE +E+ A GTIVLN+T +VLRQ+I+Q T + +W+KL+EIYLNKDL NK
Subjt:  MSITRYDIEKFDGKNDFELWKVKIKAILGQQKAIKAINDPAKLPISMTKDEKENMELAARGTIVLNLTHSVLRQIIDQETTFKMWSKLDEIYLNKDLPNK

Query:  SFIRERYFTYRMDASKSLTDNLDDFKRLSSEFKSLGDKIGEENETFILLNSLPNAYKEVKVAMKYGREKITTDAIMLAIKVRELEMQVSKKEQQSVEGLF
        +F+RER+FTY+MDA+KSLTD L++FKRLSSEF+S+G  IGEENE FILLNSLP ++K+ K A+KYGRE+ITT+AI+ A++VRELE+Q+SKK QQ  EGLF
Subjt:  SFIRERYFTYRMDASKSLTDNLDDFKRLSSEFKSLGDKIGEENETFILLNSLPNAYKEVKVAMKYGREKITTDAIMLAIKVRELEMQVSKKEQQSVEGLF

Query:  SKGKTKNN
        SKGK KN+
Subjt:  SKGKTKNN

TrEMBL top hitse value%identityAlignment
A0A5A7U6R2 Retrovirus-related Pol polyprotein from transposon TNT 1-941.3e-4944.34Show/hide
Query:  MSITRYDIEKFDGKNDFELWKVKIKAILGQQKAIKAINDPAKLPISMTKDEKENMELAARGTIVLNLTHSVLRQIIDQETTFKMWSKLDEIYLNKDLPNK
        M+ T+++IEKFDG  DF LW  +I AILG QKA+KA+ DP +LP ++TK E+E +E  A  T+++N+T +VLRQ+I++ T F  W KL  +Y  KDLPNK
Subjt:  MSITRYDIEKFDGKNDFELWKVKIKAILGQQKAIKAINDPAKLPISMTKDEKENMELAARGTIVLNLTHSVLRQIIDQETTFKMWSKLDEIYLNKDLPNK

Query:  SFIRERYFTYRMDASKSLTDNLDDFKRLSSEFKSLGDKIGEENETFILLNSLPNAYKEVKVAMKYGREKITTDAIMLAIKVRELEMQVSKKEQQSVEGLF
         FI+E+ F+++ + +K+L +NLD+FK+L++     G+K+G ENE  IL+NS+ + YKEVK  +KYGRE IT ++++  +K +ELE++   K   + EG  
Subjt:  SFIRERYFTYRMDASKSLTDNLDDFKRLSSEFKSLGDKIGEENETFILLNSLPNAYKEVKVAMKYGREKITTDAIMLAIKVRELEMQVSKKEQQSVEGLF

Query:  SKGKTKNNGRDNKHQTEDMNK
           +   N R   +  ED N+
Subjt:  SKGKTKNNGRDNKHQTEDMNK

A0A5C7GXL9 Sucrose-phosphate phosphatase5.1e-4648.42Show/hide
Query:  RYDIEKFDGKNDFELWKVKIKAILGQQKAIKAINDPAKLPISMTKDEKENMELAARGTIVLNLTHSVLRQIIDQETTFKMWSKLDEIYLNKDLPNKSFIR
        ++DI+KFDG  DF +W+ K+KA+L QQK +KAI  P KLP S+T ++K++M   A GTI+LNL+ +VLR+I D++T   +W KL+ +YL K L NK +++
Subjt:  RYDIEKFDGKNDFELWKVKIKAILGQQKAIKAINDPAKLPISMTKDEKENMELAARGTIVLNLTHSVLRQIIDQETTFKMWSKLDEIYLNKDLPNKSFIR

Query:  ERYFTYRMDASKSLTDNLDDFKRLSSEFKSLG--DKIGEENETFILLNSLPNAYKEVKVAMKYGREKITTDAIMLAIKVRELEMQVSKKE
        ER F ++MDASK L  NLDDFK+++ E  + G  +K+ +ENE  ILLNSLP+++K+VK A+KYGR  ++ +  + A+K +ELE+++ KK+
Subjt:  ERYFTYRMDASKSLTDNLDDFKRLSSEFKSLG--DKIGEENETFILLNSLPNAYKEVKVAMKYGREKITTDAIMLAIKVRELEMQVSKKE

A0A5C7HB65 gag_pre-integrs domain-containing protein1.0e-4644.8Show/hide
Query:  RYDIEKFDGKNDFELWKVKIKAILGQQKAIKAINDPAKLPISMTKDEKENMELAARGTIVLNLTHSVLRQIIDQETTFKMWSKLDEIYLNKDLPNKSFIR
        ++DI+KFDG  DF +W+ K+KA+L QQK +KAI  P KLP S+T ++K++M   A GTI+LNL+ +VLR+I D++T   +W KL+ +YL K L NK +++
Subjt:  RYDIEKFDGKNDFELWKVKIKAILGQQKAIKAINDPAKLPISMTKDEKENMELAARGTIVLNLTHSVLRQIIDQETTFKMWSKLDEIYLNKDLPNKSFIR

Query:  ERYFTYRMDASKSLTDNLDDFKRLSSEFKSLG--DKIGEENETFILLNSLPNAYKEVKVAMKYGREKITTDAIMLAIKVRELEMQVSKKEQQSVEGLFSK
        ER F ++MDASK L  NLDDFK+++ +  + G  +K+ +ENE  ILLNSLP+++K+VK A+KYGR  ++ +  + A+K +ELE+++ KK+  + E LF +
Subjt:  ERYFTYRMDASKSLTDNLDDFKRLSSEFKSLG--DKIGEENETFILLNSLPNAYKEVKVAMKYGREKITTDAIMLAIKVRELEMQVSKKEQQSVEGLFSK

Query:  GK--TKNNGRDNKHQTEDMNK
        G+   KN+  ++ ++T+  +K
Subjt:  GK--TKNNGRDNKHQTEDMNK

A0A5C7I661 Uncharacterized protein5.1e-4646.6Show/hide
Query:  RYDIEKFDGKNDFELWKVKIKAILGQQKAIKAINDPAKLPISMTKDEKENMELAARGTIVLNLTHSVLRQIIDQETTFKMWSKLDEIYLNKDLPNKSFIR
        ++DI+KFDG  DF +W+ K+KA+L QQK +KAI  P KLP S+T ++K++M   A GTI+LNL+ +VLR+I D++T   +W KL+ +YL K L NK +++
Subjt:  RYDIEKFDGKNDFELWKVKIKAILGQQKAIKAINDPAKLPISMTKDEKENMELAARGTIVLNLTHSVLRQIIDQETTFKMWSKLDEIYLNKDLPNKSFIR

Query:  ERYFTYRMDASKSLTDNLDDFKRLSSEFKSLG--DKIGEENETFILLNSLPNAYKEVKVAMKYGREKITTDAIMLAIKVRELEMQVSKKEQQSVEGLFSK
        ER F ++MDASK L  NLDDFK+++ E  + G  +K+ +ENE  ILLNSLP+++K+VK A+KYGR  ++ +  + A+K +ELE+++ KK+  + E LF +
Subjt:  ERYFTYRMDASKSLTDNLDDFKRLSSEFKSLG--DKIGEENETFILLNSLPNAYKEVKVAMKYGREKITTDAIMLAIKVRELEMQVSKKEQQSVEGLFSK

Query:  GKTKNN
           + N
Subjt:  GKTKNN

A0A5D3DVM0 Retrovirus-related Pol polyprotein from transposon TNT 1-941.4e-5144.54Show/hide
Query:  MSITRYDIEKFDGKNDFELWKVKIKAILGQQKAIKAINDPAKLPISMTKDEKENMELAARGTIVLNLTHSVLRQIIDQETTFKMWSKLDEIYLNKDLPNK
        M+ T+++IEKFDG  DF L   +I A LG QKA+KA+ DP +LP ++TK E+E +E  A  T+++N+T +VLRQ+I++ T F  W  L  +Y  KDL NK
Subjt:  MSITRYDIEKFDGKNDFELWKVKIKAILGQQKAIKAINDPAKLPISMTKDEKENMELAARGTIVLNLTHSVLRQIIDQETTFKMWSKLDEIYLNKDLPNK

Query:  SFIRERYFTYRMDASKSLTDNLDDFKRLSSEFKSLGDKIGEENETFILLNSLPNAYKEVKVAMKYGREKITTDAIMLAIKVRELEMQVSKKEQQSVEGLF
         FIRE+ F+++M+ +K+L +NLD+FK+L++      +K+G E+E  IL+N + + YKEVK ++KYGRE IT ++++ A+K +ELE++   K   + E LF
Subjt:  SFIRERYFTYRMDASKSLTDNLDDFKRLSSEFKSLGDKIGEENETFILLNSLPNAYKEVKVAMKYGREKITTDAIMLAIKVRELEMQVSKKEQQSVEGLF

Query:  SKGKTKNNGRDNKHQTEDMNKPKLKCNYC
        SKG        NK+Q    +KP LKC  C
Subjt:  SKGKTKNNGRDNKHQTEDMNKPKLKCNYC

SwissProt top hitse value%identityAlignment
P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-945.8e-2325.85Show/hide
Query:  MSITRYDIEKFDGKNDFELWKVKIKAILGQQKAIKAINDPAKLPISMTKDEKENMELAARGTIVLNLTHSVLRQIIDQETTFKMWSKLDEIYLNKDLPNK
        MS  +Y++ KF+G N F  W+ +++ +L QQ   K ++  +K P +M  ++  +++  A   I L+L+  V+  IID++T   +W++L+ +Y++K L NK
Subjt:  MSITRYDIEKFDGKNDFELWKVKIKAILGQQKAIKAINDPAKLPISMTKDEKENMELAARGTIVLNLTHSVLRQIIDQETTFKMWSKLDEIYLNKDLPNK

Query:  SFIRERYFTYRMDASKSLTDNLDDFKRLSSEFKSLGDKIGEENETFILLNSLPNAYKEVKVAMKYGREKITTDAIMLAIKVRELEMQVSKKEQQSVEGLF
         +++++ +   M    +   +L+ F  L ++  +LG KI EE++  +LLNSLP++Y  +   + +G+  I    +  A+ + E   ++ KK +   + L 
Subjt:  SFIRERYFTYRMDASKSLTDNLDDFKRLSSEFKSLGDKIGEENETFILLNSLPNAYKEVKVAMKYGREKITTDAIMLAIKVRELEMQVSKKEQQSVEGLF

Query:  SKGKTKNNGRDNKH------QTEDMNKPKLKCNYCW
        ++G+ ++  R + +      + +  N+ K +   C+
Subjt:  SKGKTKNNGRDNKH------QTEDMNKPKLKCNYCW

Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTATAACTAGATATGATATAGAGAAATTTGATGGAAAGAATGACTTTGAACTATGGAAGGTAAAAATCAAAGCCATCCTTGGACAGCAAAAAGCCATCAAAGCGAT
AAATGATCCAGCAAAATTACCAATTTCCATGACAAAAGATGAAAAAGAAAACATGGAATTGGCTGCCCGTGGAACTATTGTTCTAAACTTAACCCACAGTGTCTTGAGGC
AAATTATTGACCAAGAAACAACATTCAAGATGTGGAGCAAACTAGATGAGATATATCTCAACAAAGATCTCCCTAATAAATCTTTCATAAGAGAAAGATATTTCACTTAC
CGGATGGATGCTTCTAAATCCTTGACAGATAATCTTGATGATTTCAAAAGATTGTCCTCAGAATTTAAGTCATTGGGAGATAAAATAGGTGAAGAGAATGAAACATTTAT
TTTGTTAAACTCTTTACCAAATGCTTATAAAGAAGTGAAAGTGGCAATGAAATATGGAAGAGAAAAGATAACAACTGATGCTATCATGTTAGCCATCAAAGTTAGAGAAC
TGGAAATGCAAGTTTCAAAGAAGGAACAACAAAGTGTAGAAGGTTTGTTCTCAAAGGGGAAGACAAAGAATAATGGGAGAGACAATAAGCATCAAACAGAGGACATGAAC
AAGCCCAAACTGAAATGCAACTATTGCTGGGTTGGTGGAGACAAATCACTCCAACTTGCCGTGTGA
mRNA sequenceShow/hide mRNA sequence
ATGTCTATAACTAGATATGATATAGAGAAATTTGATGGAAAGAATGACTTTGAACTATGGAAGGTAAAAATCAAAGCCATCCTTGGACAGCAAAAAGCCATCAAAGCGAT
AAATGATCCAGCAAAATTACCAATTTCCATGACAAAAGATGAAAAAGAAAACATGGAATTGGCTGCCCGTGGAACTATTGTTCTAAACTTAACCCACAGTGTCTTGAGGC
AAATTATTGACCAAGAAACAACATTCAAGATGTGGAGCAAACTAGATGAGATATATCTCAACAAAGATCTCCCTAATAAATCTTTCATAAGAGAAAGATATTTCACTTAC
CGGATGGATGCTTCTAAATCCTTGACAGATAATCTTGATGATTTCAAAAGATTGTCCTCAGAATTTAAGTCATTGGGAGATAAAATAGGTGAAGAGAATGAAACATTTAT
TTTGTTAAACTCTTTACCAAATGCTTATAAAGAAGTGAAAGTGGCAATGAAATATGGAAGAGAAAAGATAACAACTGATGCTATCATGTTAGCCATCAAAGTTAGAGAAC
TGGAAATGCAAGTTTCAAAGAAGGAACAACAAAGTGTAGAAGGTTTGTTCTCAAAGGGGAAGACAAAGAATAATGGGAGAGACAATAAGCATCAAACAGAGGACATGAAC
AAGCCCAAACTGAAATGCAACTATTGCTGGGTTGGTGGAGACAAATCACTCCAACTTGCCGTGTGA
Protein sequenceShow/hide protein sequence
MSITRYDIEKFDGKNDFELWKVKIKAILGQQKAIKAINDPAKLPISMTKDEKENMELAARGTIVLNLTHSVLRQIIDQETTFKMWSKLDEIYLNKDLPNKSFIRERYFTY
RMDASKSLTDNLDDFKRLSSEFKSLGDKIGEENETFILLNSLPNAYKEVKVAMKYGREKITTDAIMLAIKVRELEMQVSKKEQQSVEGLFSKGKTKNNGRDNKHQTEDMN
KPKLKCNYCWVGGDKSLQLAV