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Lag0032308 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0032308
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionDNA helicase
Genome locationchr11:30167447..30169785
RNA-Seq ExpressionLag0032308
SyntenyLag0032308
Gene Ontology termsGO:0000725 - recombinational repair (biological process)
GO:0032508 - DNA duplex unwinding (biological process)
GO:0036292 - DNA rewinding (biological process)
GO:0005634 - nucleus (cellular component)
GO:0003677 - DNA binding (molecular function)
GO:0005524 - ATP binding (molecular function)
GO:0016887 - ATPase activity (molecular function)
GO:0043138 - 3'-5' DNA helicase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022158784.1 ATP-dependent DNA helicase SRS2-like protein At4g25120 isoform X1 [Momordica charantia]1.5e-1097.3Show/hide
Query:  KEHFQKLRIENAMGSSAPTAKQISYLRNLGCTITPTS
        +EHFQKLRIENAMGSSAPTAKQISYLRNLGCTITPTS
Subjt:  KEHFQKLRIENAMGSSAPTAKQISYLRNLGCTITPTS
XP_022158805.1 ATP-dependent DNA helicase SRS2-like protein At4g25120 isoform X5 [Momordica charantia]1.5e-1097.3Show/hide
Query:  KEHFQKLRIENAMGSSAPTAKQISYLRNLGCTITPTS
        +EHFQKLRIENAMGSSAPTAKQISYLRNLGCTITPTS
Subjt:  KEHFQKLRIENAMGSSAPTAKQISYLRNLGCTITPTS
XP_022158809.1 ATP-dependent DNA helicase SRS2-like protein At4g25120 isoform X6 [Momordica charantia]1.5e-1097.3Show/hide
Query:  KEHFQKLRIENAMGSSAPTAKQISYLRNLGCTITPTS
        +EHFQKLRIENAMGSSAPTAKQISYLRNLGCTITPTS
Subjt:  KEHFQKLRIENAMGSSAPTAKQISYLRNLGCTITPTS
XP_038907257.1 ATP-dependent DNA helicase SRS2-like protein At4g25120 isoform X1 [Benincasa hispida]1.5e-1097.3Show/hide
Query:  KEHFQKLRIENAMGSSAPTAKQISYLRNLGCTITPTS
        +EHFQKLRIENAMGSSAPTAKQISYLRNLGCTITPTS
Subjt:  KEHFQKLRIENAMGSSAPTAKQISYLRNLGCTITPTS
XP_038907259.1 ATP-dependent DNA helicase SRS2-like protein At4g25120 isoform X2 [Benincasa hispida]1.5e-1097.3Show/hide
Query:  KEHFQKLRIENAMGSSAPTAKQISYLRNLGCTITPTS
        +EHFQKLRIENAMGSSAPTAKQISYLRNLGCTITPTS
Subjt:  KEHFQKLRIENAMGSSAPTAKQISYLRNLGCTITPTS
TrEMBL top hitse value%identityAlignment
A0A1S4DS85 DNA helicase1.3e-0991.89Show/hide
Query:  KEHFQKLRIENAMGSSAPTAKQISYLRNLGCTITPTS
        +EHFQKLRIENAMGSSA T+KQISYLRNLGCTITPTS
Subjt:  KEHFQKLRIENAMGSSAPTAKQISYLRNLGCTITPTS
A0A6J1DWV4 DNA helicase7.1e-1197.3Show/hide
Query:  KEHFQKLRIENAMGSSAPTAKQISYLRNLGCTITPTS
        +EHFQKLRIENAMGSSAPTAKQISYLRNLGCTITPTS
Subjt:  KEHFQKLRIENAMGSSAPTAKQISYLRNLGCTITPTS
A0A6J1E0F2 DNA helicase7.1e-1197.3Show/hide
Query:  KEHFQKLRIENAMGSSAPTAKQISYLRNLGCTITPTS
        +EHFQKLRIENAMGSSAPTAKQISYLRNLGCTITPTS
Subjt:  KEHFQKLRIENAMGSSAPTAKQISYLRNLGCTITPTS
A0A6J1E0F7 DNA helicase7.1e-1197.3Show/hide
Query:  KEHFQKLRIENAMGSSAPTAKQISYLRNLGCTITPTS
        +EHFQKLRIENAMGSSAPTAKQISYLRNLGCTITPTS
Subjt:  KEHFQKLRIENAMGSSAPTAKQISYLRNLGCTITPTS
A0A6J1E0H8 DNA helicase7.1e-1197.3Show/hide
Query:  KEHFQKLRIENAMGSSAPTAKQISYLRNLGCTITPTS
        +EHFQKLRIENAMGSSAPTAKQISYLRNLGCTITPTS
Subjt:  KEHFQKLRIENAMGSSAPTAKQISYLRNLGCTITPTS
SwissProt top hitse value%identityAlignment
D1KF50 ATP-dependent DNA helicase SRS2-like protein At4g251203.2e-0867.57Show/hide
Query:  KEHFQKLRIENAMGSSAPTAKQISYLRNLGCTITPTS
        +EHFQKLRIEN+MG+S  T+KQI++L +LGCT+ PTS
Subjt:  KEHFQKLRIENAMGSSAPTAKQISYLRNLGCTITPTS
Arabidopsis top hitse value%identityAlignment
AT4G25120.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein2.3e-0967.57Show/hide
Query:  KEHFQKLRIENAMGSSAPTAKQISYLRNLGCTITPTS
        +EHFQKLRIEN+MG+S  T+KQI++L +LGCT+ PTS
Subjt:  KEHFQKLRIENAMGSSAPTAKQISYLRNLGCTITPTS

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAAACCAAGGAGCATTTCCAGAAATTAAGGATTGAAAATGCAATGGGCTCCTCAGCACCAACAGCAAAACAGATTTCGTATTTGCGTAATTTGGGATGTACTATTAC
TCCAACATCGCTGGAACTGGAAGAAGGGGATAGACTATTAGGGGCTGTTGGCCCATGGTTTCGGAATCAGAATCAGCCTGGGAATCAGAAAACAGTGTTTGGGGTGCTGT
GTTCTGAACCAAACAGTGTTTGGGGTGCTGGGTTCTGA
mRNA sequenceShow/hide mRNA sequence
ATGAAAACCAAGGAGCATTTCCAGAAATTAAGGATTGAAAATGCAATGGGCTCCTCAGCACCAACAGCAAAACAGATTTCGTATTTGCGTAATTTGGGATGTACTATTAC
TCCAACATCGCTGGAACTGGAAGAAGGGGATAGACTATTAGGGGCTGTTGGCCCATGGTTTCGGAATCAGAATCAGCCTGGGAATCAGAAAACAGTGTTTGGGGTGCTGT
GTTCTGAACCAAACAGTGTTTGGGGTGCTGGGTTCTGA
Protein sequenceShow/hide protein sequence
MKTKEHFQKLRIENAMGSSAPTAKQISYLRNLGCTITPTSLELEEGDRLLGAVGPWFRNQNQPGNQKTVFGVLCSEPNSVWGAGF