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Lag0032310 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0032310
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionTransposable element protein
Genome locationchr11:30241812..30244554
RNA-Seq ExpressionLag0032310
SyntenyLag0032310
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
BBG99665.1 transposable element gene [Prunus dulcis]4.1e-2550Show/hide
Query:  DWSFRLDEALWAYRTTYKTPL--GAIRMLQLNELEEFHQFSYENAKMYKEKTKLWHDKKIKSKEFVK-----------------------GPFIVIDVFP
        DWS RLD+ALWAYRT YKTP+  G  R LQLNELEE    +YENAK+YKEKTK +HDKKI  K F K                       GPF++ +VF 
Subjt:  DWSFRLDEALWAYRTTYKTPL--GAIRMLQLNELEEFHQFSYENAKMYKEKTKLWHDKKIKSKEFVK-----------------------GPFIVIDVFP

Query:  HGAITLQDEKDGRMFKVNGQRVKHYWGEEFQSKYPSLRARKE
        HGA+ +Q+ KDG  FKVNG R+K Y+   F +   S +A KE
Subjt:  HGAITLQDEKDGRMFKVNGQRVKHYWGEEFQSKYPSLRARKE

PIN26668.1 DNA-directed DNA polymerase [Handroanthus impetiginosus]5.9e-2442.94Show/hide
Query:  DDWSFRLDEALWAYRTTYKTPLG------------------------AI-------------RMLQLNELEEFHQFSYENAKMYKEKTKLWHDKKIKSKE
        +DWS RLDEALWAYRT YKTP+G                        AI             R+LQLNEL+EF   +YENAK+YKEKTK WHDKKI  + 
Subjt:  DDWSFRLDEALWAYRTTYKTPLG------------------------AI-------------RMLQLNELEEFHQFSYENAKMYKEKTKLWHDKKIKSKE

Query:  FV-----------------------KGPFIVIDVFPHGAITLQDEKDGRMFKVNGQRVKHYWG
        F                         GPF + +VFPHGA+ L++E     FKVN QR+KHYWG
Subjt:  FV-----------------------KGPFIVIDVFPHGAITLQDEKDGRMFKVNGQRVKHYWG

XP_017970395.1 PREDICTED: uncharacterized protein LOC108660654 [Theobroma cacao]3.5e-2442.44Show/hide
Query:  DWSFRLDEALWAYRTTYKTPLGAI-------------------------------------RMLQLNELEEFHQFSYENAKMYKEKTKLWHDKKIKSKEF
        DWS RLD+ALWAYRT YKTP+G                                       R+LQLNEL+EF   +YENAK+YKEKTK WHDKKI ++ F
Subjt:  DWSFRLDEALWAYRTTYKTPLGAI-------------------------------------RMLQLNELEEFHQFSYENAKMYKEKTKLWHDKKIKSKEF

Query:  V-----------------------KGPFIVIDVFPHGAITLQDEKDGRMFKVNGQRVKHYWGEEFQSKYPSL
                                 GPFIV +VFPHGAI ++   + R FKVNGQR+KHYWG E  S+  S+
Subjt:  V-----------------------KGPFIVIDVFPHGAITLQDEKDGRMFKVNGQRVKHYWGEEFQSKYPSL

XP_019242465.1 PREDICTED: uncharacterized protein LOC109222576, partial [Nicotiana attenuata]5.9e-2441.21Show/hide
Query:  DWSFRLDEALWAYRTTYKTPLGAI-------------------------------------RMLQLNELEEFHQFSYENAKMYKEKTKLWHDKKIKSKEF
        DW+ +LD+ALWAYRT YKTP+GA                                      R+LQL+ELEEF   +YENAK+YKEKTK WHDK I+ +EF
Subjt:  DWSFRLDEALWAYRTTYKTPLGAI-------------------------------------RMLQLNELEEFHQFSYENAKMYKEKTKLWHDKKIKSKEF

Query:  V-----------------------KGPFIVIDVFPHGAITLQDEKDGRMFKVNGQRVKHYWGEEF
                                 GPF+V+ V PHGA+ L+D    R F VNGQR+KHYWG +F
Subjt:  V-----------------------KGPFIVIDVFPHGAITLQDEKDGRMFKVNGQRVKHYWGEEF

XP_022156052.1 uncharacterized protein LOC111023021 [Momordica charantia]3.5e-2447.58Show/hide
Query:  WSFRLDEALWAYRTTYKTPLGAIRMLQLNELEEFHQFSYENAKMYKEKTKLWHDKKIKSKEFVK-----------------------GPFIVIDVFPHGA
        W+ +LD+A+WAY T +KTPLG +R LQL ELE+FH+ +Y+NAK+YKEKTK WHD +I  ++F K                       GPF+V  VF HGA
Subjt:  WSFRLDEALWAYRTTYKTPLGAIRMLQLNELEEFHQFSYENAKMYKEKTKLWHDKKIKSKEFVK-----------------------GPFIVIDVFPHGA

Query:  ITLQDEKDGRMFKVNGQRVKHYWG
        + +Q+   GR F VNGQR+KH++G
Subjt:  ITLQDEKDGRMFKVNGQRVKHYWG

TrEMBL top hitse value%identityAlignment
A0A2G9FWY3 Reverse transcriptase1.8e-2340.12Show/hide
Query:  DWSFRLDEALWAYRTTYKTPLG------------------------AI-------------RMLQLNELEEFHQFSYENAKMYKEKTKLWHDKKIKSKEF
        DWS RLDEALWAYRT YKTP+G                        AI             R+LQLNEL+EF   +YENAK+YKEK K WH+KKI  + F
Subjt:  DWSFRLDEALWAYRTTYKTPLG------------------------AI-------------RMLQLNELEEFHQFSYENAKMYKEKTKLWHDKKIKSKEF

Query:  V-----------------------KGPFIVIDVFPHGAITLQDEKDGRMFKVNGQRVKHYWGEEFQSKYPSL
                                 GPF + +VFPHGA+ L+++     FKVN QR+KHYWGE    ++ S+
Subjt:  V-----------------------KGPFIVIDVFPHGAITLQDEKDGRMFKVNGQRVKHYWGEEFQSKYPSL

A0A2G9IA86 DNA-directed DNA polymerase2.9e-2442.94Show/hide
Query:  DDWSFRLDEALWAYRTTYKTPLG------------------------AI-------------RMLQLNELEEFHQFSYENAKMYKEKTKLWHDKKIKSKE
        +DWS RLDEALWAYRT YKTP+G                        AI             R+LQLNEL+EF   +YENAK+YKEKTK WHDKKI  + 
Subjt:  DDWSFRLDEALWAYRTTYKTPLG------------------------AI-------------RMLQLNELEEFHQFSYENAKMYKEKTKLWHDKKIKSKE

Query:  FV-----------------------KGPFIVIDVFPHGAITLQDEKDGRMFKVNGQRVKHYWG
        F                         GPF + +VFPHGA+ L++E     FKVN QR+KHYWG
Subjt:  FV-----------------------KGPFIVIDVFPHGAITLQDEKDGRMFKVNGQRVKHYWG

A0A3Q7XQS1 LOW QUALITY PROTEIN: uncharacterized protein LOC1137841291.1e-2343.9Show/hide
Query:  DWSFRLDEALWAYRTTYKTPL-------------------------------------GAIRMLQLNELEEFHQFSYENAKMYKEKTKLWHDKKIKSKEF
        DWS +LD+ALWAYRT +KT L                                     G  R+LQLNELEEF  F+YENAK+YKEKTK WHDKKIK KEF
Subjt:  DWSFRLDEALWAYRTTYKTPL-------------------------------------GAIRMLQLNELEEFHQFSYENAKMYKEKTKLWHDKKIKSKEF

Query:  VK-----------------------GPFIVIDVFPHGAITLQDEKDGRMFKVNGQRVKHYWGEE
         +                       GPF V  VFPHGA+ L+D      FKVNGQR+K Y+GEE
Subjt:  VK-----------------------GPFIVIDVFPHGAITLQDEKDGRMFKVNGQRVKHYWGEE

A0A4Y1R6P1 Reverse transcriptase2.0e-2550Show/hide
Query:  DWSFRLDEALWAYRTTYKTPL--GAIRMLQLNELEEFHQFSYENAKMYKEKTKLWHDKKIKSKEFVK-----------------------GPFIVIDVFP
        DWS RLD+ALWAYRT YKTP+  G  R LQLNELEE    +YENAK+YKEKTK +HDKKI  K F K                       GPF++ +VF 
Subjt:  DWSFRLDEALWAYRTTYKTPL--GAIRMLQLNELEEFHQFSYENAKMYKEKTKLWHDKKIKSKEFVK-----------------------GPFIVIDVFP

Query:  HGAITLQDEKDGRMFKVNGQRVKHYWGEEFQSKYPSLRARKE
        HGA+ +Q+ KDG  FKVNG R+K Y+   F +   S +A KE
Subjt:  HGAITLQDEKDGRMFKVNGQRVKHYWGEEFQSKYPSLRARKE

A0A6J1DR08 uncharacterized protein LOC1110230211.7e-2447.58Show/hide
Query:  WSFRLDEALWAYRTTYKTPLGAIRMLQLNELEEFHQFSYENAKMYKEKTKLWHDKKIKSKEFVK-----------------------GPFIVIDVFPHGA
        W+ +LD+A+WAY T +KTPLG +R LQL ELE+FH+ +Y+NAK+YKEKTK WHD +I  ++F K                       GPF+V  VF HGA
Subjt:  WSFRLDEALWAYRTTYKTPLGAIRMLQLNELEEFHQFSYENAKMYKEKTKLWHDKKIKSKEFVK-----------------------GPFIVIDVFPHGA

Query:  ITLQDEKDGRMFKVNGQRVKHYWG
        + +Q+   GR F VNGQR+KH++G
Subjt:  ITLQDEKDGRMFKVNGQRVKHYWG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTCTTTACGTGTGGCTTTATTAAGCCTTTGGTAATCCATGCACACCCTCCAACCGGTTACTGTTCTAGTTGGAATCAGTTCATTAGTTTCATTAATCACTACTGTCA
TACCTCCTTTCTTGGGTACACATTGGACCAGACTTACCCAATTGCTATCCGAGATAAGATAGATGATTGGTCTTTTAGGTTGGATGAGGCTCTTTGGGCTTATAGGACAA
CCTATAAGACTCCTCTAGGAGCAATAAGAATGCTGCAGCTTAATGAATTAGAGGAATTTCACCAATTTTCTTATGAAAATGCAAAAATGTATAAGGAAAAGACTAAGTTG
TGGCATGACAAGAAAATTAAATCTAAAGAGTTTGTCAAGGGACCATTTATTGTGATTGACGTTTTCCCCCATGGAGCAATTACTTTGCAGGACGAAAAAGATGGGCGAAT
GTTCAAAGTGAATGGACAGCGTGTGAAACATTATTGGGGTGAGGAGTTTCAGTCAAAATATCCTTCCCTAAGAGCGAGGAAAGAAAGAGAGGGTGAGGAGGAGAAGGTAC
CGGTTACTCCAGAAGTGAAAAAAGGGAAAACCAAGAAGAAGAGAACGTCAGAAGAGAAAGAAGCTAAAAGAAGAAGAAGGCAGCAGAGGGCTGCAGAGCAAGAAGCTATC
CAAGAAGAAGTAGTGAATGACCTAGATACGGAAGGAGTTCAAAATCCTGAGGAAGAATCGATAGTCCCAGATACGGTTCAAGAAGAAAATGTTGAGGAAAATCAAGAAAC
ACAGGCTGACGAGGTTCAAGAGGAAGAGGCAGCGGTTGTGCCTGCGAAAGAAACTGAAAGTGAGCCAGTTCAGGAGGCTCGAGTGGAGGTGATCATGCCGGAGGTACCTA
AGCGTCGCTGCATTAAGCGAAAAGCTGGCGCATCGGAGGAACACGATGAAATAGAAGAACAACAGTTACCATTTGCTCGCTTCATCAACAATTTTGCCAGAGCAAAATAC
GCTGAGCTTCTGAAAAGAGATTTCTTATTTGAGCGGGGATTCAACGGTGATCTTCCACAGTTTCTGAGGACCGGTATTGCAGACCACGGATGGGAGTTGTTTTGTGCGAA
GCCTGAGTCTGTAAACGCACAGATTGGAGTCCAGGTAATTGTCCGAGGAGTCGAGGTAGATTGGAGTCCTAGTGTTATCAACGCACTGTACAATCTTCAGAACTTCCCCC
ATGCGACATATAATGAGATGACTGTAGCGCCATCTAATGAGCAGTTAAGTGATGCTGTGAGAGAGGTATGTATTGAAGGAGCACAGTGGCAGCTATCCAACAAGACTCAG
AAGAGGACATTCCAGTCGGCTAATTTGAAAAGGGAAGCGAACACGTGGATGAGATTTATCAGACAAGGATGCTTCAAGCGACACACGACTCGACAATCTCCAGGGAACGA
GTTCTTCTAG
mRNA sequenceShow/hide mRNA sequence
ATGGTCTTTACGTGTGGCTTTATTAAGCCTTTGGTAATCCATGCACACCCTCCAACCGGTTACTGTTCTAGTTGGAATCAGTTCATTAGTTTCATTAATCACTACTGTCA
TACCTCCTTTCTTGGGTACACATTGGACCAGACTTACCCAATTGCTATCCGAGATAAGATAGATGATTGGTCTTTTAGGTTGGATGAGGCTCTTTGGGCTTATAGGACAA
CCTATAAGACTCCTCTAGGAGCAATAAGAATGCTGCAGCTTAATGAATTAGAGGAATTTCACCAATTTTCTTATGAAAATGCAAAAATGTATAAGGAAAAGACTAAGTTG
TGGCATGACAAGAAAATTAAATCTAAAGAGTTTGTCAAGGGACCATTTATTGTGATTGACGTTTTCCCCCATGGAGCAATTACTTTGCAGGACGAAAAAGATGGGCGAAT
GTTCAAAGTGAATGGACAGCGTGTGAAACATTATTGGGGTGAGGAGTTTCAGTCAAAATATCCTTCCCTAAGAGCGAGGAAAGAAAGAGAGGGTGAGGAGGAGAAGGTAC
CGGTTACTCCAGAAGTGAAAAAAGGGAAAACCAAGAAGAAGAGAACGTCAGAAGAGAAAGAAGCTAAAAGAAGAAGAAGGCAGCAGAGGGCTGCAGAGCAAGAAGCTATC
CAAGAAGAAGTAGTGAATGACCTAGATACGGAAGGAGTTCAAAATCCTGAGGAAGAATCGATAGTCCCAGATACGGTTCAAGAAGAAAATGTTGAGGAAAATCAAGAAAC
ACAGGCTGACGAGGTTCAAGAGGAAGAGGCAGCGGTTGTGCCTGCGAAAGAAACTGAAAGTGAGCCAGTTCAGGAGGCTCGAGTGGAGGTGATCATGCCGGAGGTACCTA
AGCGTCGCTGCATTAAGCGAAAAGCTGGCGCATCGGAGGAACACGATGAAATAGAAGAACAACAGTTACCATTTGCTCGCTTCATCAACAATTTTGCCAGAGCAAAATAC
GCTGAGCTTCTGAAAAGAGATTTCTTATTTGAGCGGGGATTCAACGGTGATCTTCCACAGTTTCTGAGGACCGGTATTGCAGACCACGGATGGGAGTTGTTTTGTGCGAA
GCCTGAGTCTGTAAACGCACAGATTGGAGTCCAGGTAATTGTCCGAGGAGTCGAGGTAGATTGGAGTCCTAGTGTTATCAACGCACTGTACAATCTTCAGAACTTCCCCC
ATGCGACATATAATGAGATGACTGTAGCGCCATCTAATGAGCAGTTAAGTGATGCTGTGAGAGAGGTATGTATTGAAGGAGCACAGTGGCAGCTATCCAACAAGACTCAG
AAGAGGACATTCCAGTCGGCTAATTTGAAAAGGGAAGCGAACACGTGGATGAGATTTATCAGACAAGGATGCTTCAAGCGACACACGACTCGACAATCTCCAGGGAACGA
GTTCTTCTAG
Protein sequenceShow/hide protein sequence
MVFTCGFIKPLVIHAHPPTGYCSSWNQFISFINHYCHTSFLGYTLDQTYPIAIRDKIDDWSFRLDEALWAYRTTYKTPLGAIRMLQLNELEEFHQFSYENAKMYKEKTKL
WHDKKIKSKEFVKGPFIVIDVFPHGAITLQDEKDGRMFKVNGQRVKHYWGEEFQSKYPSLRARKEREGEEEKVPVTPEVKKGKTKKKRTSEEKEAKRRRRQQRAAEQEAI
QEEVVNDLDTEGVQNPEEESIVPDTVQEENVEENQETQADEVQEEEAAVVPAKETESEPVQEARVEVIMPEVPKRRCIKRKAGASEEHDEIEEQQLPFARFINNFARAKY
AELLKRDFLFERGFNGDLPQFLRTGIADHGWELFCAKPESVNAQIGVQVIVRGVEVDWSPSVINALYNLQNFPHATYNEMTVAPSNEQLSDAVREVCIEGAQWQLSNKTQ
KRTFQSANLKREANTWMRFIRQGCFKRHTTRQSPGNEFF