; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0032320 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0032320
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRetrotransposon gag protein
Genome locationchr11:30393253..30395962
RNA-Seq ExpressionLag0032320
SyntenyLag0032320
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0050736.1 retrotransposon gag protein [Cucumis melo var. makuwa]7.9e-4941.3Show/hide
Query:  RSPEEMEKVDDPKYCKYHRVIGHPVERCFVLKDSILKLAMERKIELDLDEVAQSNL--------------------------------------------
        + PE++EKVDDP YCKYHR+I HPVE+CFVLK+ ILKLA E KI+LD+DEVAQ+N                                             
Subjt:  RSPEEMEKVDDPKYCKYHRVIGHPVERCFVLKDSILKLAMERKIELDLDEVAQSNL--------------------------------------------

Query:  ----------------------------------------ATIKEKSKHQRKKDPKKLQPKRKRSKKFSQPQQQVMLNKSFSKTFHKKKKENLA------
                                                  I  K K +R K   K +P +++ +KF QP++ + L + F ++F +   E +       
Subjt:  ----------------------------------------ATIKEKSKHQRKKDPKKLQPKRKRSKKFSQPQQQVMLNKSFSKTFHKKKKENLA------

Query:  TSYCINV-------EEVDNSKKSEQRTSVFDRIKPPTTRPSVFHRMSMVATEEENQCSMSTSTRPSAFQRLSVSTSKKSRSSTSVFDRLKVTIDQPKRKM
        T+  + V       EEVDNS + +QRTSVFDRIKP TTR SVF R+SM   EEENQC MST TR SAF+RLS+S SKK R STS FDRLK+T DQ +R+M
Subjt:  TSYCINV-------EEVDNSKKSEQRTSVFDRIKPPTTRPSVFHRMSMVATEEENQCSMSTSTRPSAFQRLSVSTSKKSRSSTSVFDRLKVTIDQPKRKM

Query:  NNLELKLFEEVNSDTKLHSSIPSRMKRKFSVLINTEGSL
         +L+ K F E N D K++S +PSR+KRK S+ INTEGSL
Subjt:  NNLELKLFEEVNSDTKLHSSIPSRMKRKFSVLINTEGSL

KAA0062063.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]2.1e-4933.15Show/hide
Query:  LVKYNPLFEPD-----------SDVVTVMMTETRTMEERMTEMQEHINNLMKAIEEKDSQIEQLKSQIENQHIAESSQTQVVKNHDKGKSIVQDDHPQCS
        ++K NPL+E D            +V++V+M +  T E    EM+  IN L+K +EE+D +I   + Q+      ESS+T +VK  DKGK+++Q++  Q S
Subjt:  LVKYNPLFEPD-----------SDVVTVMMTETRTMEERMTEMQEHINNLMKAIEEKDSQIEQLKSQIENQHIAESSQTQVVKNHDKGKSIVQDDHPQCS

Query:  VLVASLSIQQLE----------------------------------------------------------DMITNCIR----------------------
        + +ASLS+QQL+                                                          + + N I                       
Subjt:  VLVASLSIQQLE----------------------------------------------------------DMITNCIR----------------------

Query:  SPEEMEKVDDPKYCKYHRVIGHPVERCFVLKDSILKLAMERKIELDLDEVAQSNLATIK-----------------------------------------
        + E++ KVDDP YCK+ R+I HPVE+CFVLK+ ILKLA E KIELD+DEV Q+N   IK                                         
Subjt:  SPEEMEKVDDPKYCKYHRVIGHPVERCFVLKDSILKLAMERKIELDLDEVAQSNLATIK-----------------------------------------

Query:  -------------------------------------------EKSKHQRKKDPKKLQPKRKRSKKFSQPQQQVMLNKSFSKTFHK-KKKENLATSYC--
                                                    K+K +R K   K +P + +   F QP++ + L + F ++F K   KE L  + C  
Subjt:  -------------------------------------------EKSKHQRKKDPKKLQPKRKRSKKFSQPQQQVMLNKSFSKTFHK-KKKENLATSYC--

Query:  ----------INVEEVDNSKKSEQRTSVFDRIKPPTTRPSVFHRMSMVATEEENQCSMSTSTRPSAFQRLSVSTSKKSRSSTSVFDRLKVTIDQPKRKMN
                  ++ EEVDNS + +QRT VFDRIKP TTR SVF R+SMV  EEENQC MSTST+ S F+RLS+STSKK R STS FDRLK   DQ +R+M 
Subjt:  ----------INVEEVDNSKKSEQRTSVFDRIKPPTTRPSVFHRMSMVATEEENQCSMSTSTRPSAFQRLSVSTSKKSRSSTSVFDRLKVTIDQPKRKMN

Query:  NLELKLF-EEVNSDTKLHSSIPSRMKRKFSVLIN
         L+ KLF EE N D K+H+ + SRMKRK S+ I+
Subjt:  NLELKLF-EEVNSDTKLHSSIPSRMKRKFSVLIN

KAA0066166.1 Retrotransposon gag protein [Cucumis melo var. makuwa]6.4e-5136.59Show/hide
Query:  VTVMMTETRTMEERMTEMQEHINNLMKAIEEKDSQIEQLKSQIENQHIAESSQTQVVKNHDKGKSI------------------------VQDDHPQCSV
        +++M T+  T E+R+ E+++ IN LMK +EE+D +I  LK+ IE++  AESS    + N DKGK +                        +Q D   C  
Subjt:  VTVMMTETRTMEERMTEMQEHINNLMKAIEEKDSQIEQLKSQIENQHIAESSQTQVVKNHDKGKSI------------------------VQDDHPQCSV

Query:  -------LVASLSIQQ---------------------LEDMITNCI------RSPEEMEKVDDPKYCKYHRVIGHPVERCFVLKDSILKLAMERKIELDL
               ++   +I+Q                     LE ++ N +      + P++  KVDDP YCKYHRVI HPVE+CF+LK  ILKLA E+KIELD+
Subjt:  -------LVASLSIQQ---------------------LEDMITNCI------RSPEEMEKVDDPKYCKYHRVIGHPVERCFVLKDSILKLAMERKIELDL

Query:  DEVAQSNLATIKEKSKHQRKKDPKKLQPKRKRSKKFSQPQQQVMLNKSFSKTFHKKKKENLATSYCINV----------EEVDNSKKSEQRTSVFDRIKP
         EVAQ+N   ++                        S P     LN       H ++   +   + + +          EEVDNS + +QRT VFDRIKP
Subjt:  DEVAQSNLATIKEKSKHQRKKDPKKLQPKRKRSKKFSQPQQQVMLNKSFSKTFHKKKKENLATSYCINV----------EEVDNSKKSEQRTSVFDRIKP

Query:  PTTRPSVFHRMSMVATEEENQCSMSTSTRPSAFQRLSVSTSKKSRSSTSVFDRLKVTIDQPKRKMNNLELKLFEEVNSDTKLHSSIPSRMKRKFSVLINT
          TR S+F R SM   EE+NQC MSTST+ SAF+RLS+STSK+ R  TS FDRLK+T DQ +R+M  L+ K F E N+D K+++ +PS MKRK  V INT
Subjt:  PTTRPSVFHRMSMVATEEENQCSMSTSTRPSAFQRLSVSTSKKSRSSTSVFDRLKVTIDQPKRKMNNLELKLFEEVNSDTKLHSSIPSRMKRKFSVLINT

Query:  E-GSLKFLFSKYEGAPSPSSKALTLLRCSSFSLSSKVLTR
        E GS+      +      S+ + + + C    L   +LTR
Subjt:  E-GSLKFLFSKYEGAPSPSSKALTLLRCSSFSLSSKVLTR

TYK09793.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]1.1e-5834.98Show/hide
Query:  KASIIASEETTLQGAYTNDKFLVKYNPLFE--PDSDVVTVMMTETRTMEERMTEMQEHINNLMKAIEEKDSQIEQLKSQIENQHIAESSQTQVVKNHDKG
        K  I+  E   +   Y++ +      P  E  P  ++++VM+T   T E RMTE+++ +N LMK +EE+D +I  LK+ IE+   AESS    VKN DKG
Subjt:  KASIIASEETTLQGAYTNDKFLVKYNPLFE--PDSDVVTVMMTETRTMEERMTEMQEHINNLMKAIEEKDSQIEQLKSQIENQHIAESSQTQVVKNHDKG

Query:  KSIVQDDHPQCSVLVASLSIQQLEDMITNCIRS-------------------------------------------------------------------
        K+++Q+   Q S  + SLS+QQL++MI N I++                                                                   
Subjt:  KSIVQDDHPQCSVLVASLSIQQLEDMITNCIRS-------------------------------------------------------------------

Query:  ---------PEEMEKVDDPKYCKYHRVIGHPVERCFVLKDSILKLAMERKIELDLDEVAQSN--------------------------------------
                 PE+ EKVDDP YCKYHRVI HPVE+CFVLK+ ILKLA E+KIELD+DEVAQ+N                                      
Subjt:  ---------PEEMEKVDDPKYCKYHRVIGHPVERCFVLKDSILKLAMERKIELDLDEVAQSN--------------------------------------

Query:  -LATIKEKSKHQRKKD---------------PKKLQ-----------------PKRKRSKK-------------FSQPQQQVMLNKSFSKTF---HKKKK
           TI  ++K    KD               P  +Q                  K  R+KK             F Q ++ + L +   ++F   H ++ 
Subjt:  -LATIKEKSKHQRKKD---------------PKKLQ-----------------PKRKRSKK-------------FSQPQQQVMLNKSFSKTF---HKKKK

Query:  ENLATSYCINVEEVD----------NSKKSEQRTSVFDRIKPPTTRPSVFHRMSMVATEEENQCSMSTSTRPSAFQRLSVSTSKKSRSSTSVFDRLKVTI
          +   +  ++ EVD          NS +  QRTSVFDRIKP TTR SVF R+SM   EEENQC     TR S F+RLS+STSKK R STS FDRLK+T 
Subjt:  ENLATSYCINVEEVD----------NSKKSEQRTSVFDRIKPPTTRPSVFHRMSMVATEEENQCSMSTSTRPSAFQRLSVSTSKKSRSSTSVFDRLKVTI

Query:  DQPKRKMNNLELKLFEEVNSDTKLHSSIPSRMKRKFSVLINTEGSL
        DQ +R+M + + K F E N D K+HS +PSRMKRK SV INTEGSL
Subjt:  DQPKRKMNNLELKLFEEVNSDTKLHSSIPSRMKRKFSVLINTEGSL

TYK15207.1 Retrotransposon gag protein [Cucumis melo var. makuwa]2.9e-5136.59Show/hide
Query:  VTVMMTETRTMEERMTEMQEHINNLMKAIEEKDSQIEQLKSQIENQHIAESSQTQVVKNHDKGKSI------------------------VQDDHPQCSV
        +++M T+  T E+R+ E+++ IN LMK +EE+D +I  LK+ IE++  AESS    + N DKGK +                        +Q D   C  
Subjt:  VTVMMTETRTMEERMTEMQEHINNLMKAIEEKDSQIEQLKSQIENQHIAESSQTQVVKNHDKGKSI------------------------VQDDHPQCSV

Query:  -------LVASLSIQQ---------------------LEDMITNCI------RSPEEMEKVDDPKYCKYHRVIGHPVERCFVLKDSILKLAMERKIELDL
               ++   +I+Q                     LE ++ N +      + P++  KVDDP YCKYHRVI HPVE+CF+LK+ ILKLA E+KIELD+
Subjt:  -------LVASLSIQQ---------------------LEDMITNCI------RSPEEMEKVDDPKYCKYHRVIGHPVERCFVLKDSILKLAMERKIELDL

Query:  DEVAQSNLATIKEKSKHQRKKDPKKLQPKRKRSKKFSQPQQQVMLNKSFSKTFHKKKKENLATSYCINV----------EEVDNSKKSEQRTSVFDRIKP
         EVAQ+N   ++                        S P     LN       H ++   +   + + +          EEVDNS + +QRT VFDRIKP
Subjt:  DEVAQSNLATIKEKSKHQRKKDPKKLQPKRKRSKKFSQPQQQVMLNKSFSKTFHKKKKENLATSYCINV----------EEVDNSKKSEQRTSVFDRIKP

Query:  PTTRPSVFHRMSMVATEEENQCSMSTSTRPSAFQRLSVSTSKKSRSSTSVFDRLKVTIDQPKRKMNNLELKLFEEVNSDTKLHSSIPSRMKRKFSVLINT
          TR S+F R SM   EE+NQC MSTST+ SAF+RLS+STSK+ R  TS FDRLK+T DQ +R+M  L+ K F E N+D K+++ +PS MKRK  V INT
Subjt:  PTTRPSVFHRMSMVATEEENQCSMSTSTRPSAFQRLSVSTSKKSRSSTSVFDRLKVTIDQPKRKMNNLELKLFEEVNSDTKLHSSIPSRMKRKFSVLINT

Query:  E-GSLKFLFSKYEGAPSPSSKALTLLRCSSFSLSSKVLTR
        E GS+      +      S+ + + + C    L   +LTR
Subjt:  E-GSLKFLFSKYEGAPSPSSKALTLLRCSSFSLSSKVLTR

TrEMBL top hitse value%identityAlignment
A0A5A7U974 Retrotransposon gag protein3.8e-4941.3Show/hide
Query:  RSPEEMEKVDDPKYCKYHRVIGHPVERCFVLKDSILKLAMERKIELDLDEVAQSNL--------------------------------------------
        + PE++EKVDDP YCKYHR+I HPVE+CFVLK+ ILKLA E KI+LD+DEVAQ+N                                             
Subjt:  RSPEEMEKVDDPKYCKYHRVIGHPVERCFVLKDSILKLAMERKIELDLDEVAQSNL--------------------------------------------

Query:  ----------------------------------------ATIKEKSKHQRKKDPKKLQPKRKRSKKFSQPQQQVMLNKSFSKTFHKKKKENLA------
                                                  I  K K +R K   K +P +++ +KF QP++ + L + F ++F +   E +       
Subjt:  ----------------------------------------ATIKEKSKHQRKKDPKKLQPKRKRSKKFSQPQQQVMLNKSFSKTFHKKKKENLA------

Query:  TSYCINV-------EEVDNSKKSEQRTSVFDRIKPPTTRPSVFHRMSMVATEEENQCSMSTSTRPSAFQRLSVSTSKKSRSSTSVFDRLKVTIDQPKRKM
        T+  + V       EEVDNS + +QRTSVFDRIKP TTR SVF R+SM   EEENQC MST TR SAF+RLS+S SKK R STS FDRLK+T DQ +R+M
Subjt:  TSYCINV-------EEVDNSKKSEQRTSVFDRIKPPTTRPSVFHRMSMVATEEENQCSMSTSTRPSAFQRLSVSTSKKSRSSTSVFDRLKVTIDQPKRKM

Query:  NNLELKLFEEVNSDTKLHSSIPSRMKRKFSVLINTEGSL
         +L+ K F E N D K++S +PSR+KRK S+ INTEGSL
Subjt:  NNLELKLFEEVNSDTKLHSSIPSRMKRKFSVLINTEGSL

A0A5A7V1P3 Ty3-gypsy retrotransposon protein1.0e-4933.15Show/hide
Query:  LVKYNPLFEPD-----------SDVVTVMMTETRTMEERMTEMQEHINNLMKAIEEKDSQIEQLKSQIENQHIAESSQTQVVKNHDKGKSIVQDDHPQCS
        ++K NPL+E D            +V++V+M +  T E    EM+  IN L+K +EE+D +I   + Q+      ESS+T +VK  DKGK+++Q++  Q S
Subjt:  LVKYNPLFEPD-----------SDVVTVMMTETRTMEERMTEMQEHINNLMKAIEEKDSQIEQLKSQIENQHIAESSQTQVVKNHDKGKSIVQDDHPQCS

Query:  VLVASLSIQQLE----------------------------------------------------------DMITNCIR----------------------
        + +ASLS+QQL+                                                          + + N I                       
Subjt:  VLVASLSIQQLE----------------------------------------------------------DMITNCIR----------------------

Query:  SPEEMEKVDDPKYCKYHRVIGHPVERCFVLKDSILKLAMERKIELDLDEVAQSNLATIK-----------------------------------------
        + E++ KVDDP YCK+ R+I HPVE+CFVLK+ ILKLA E KIELD+DEV Q+N   IK                                         
Subjt:  SPEEMEKVDDPKYCKYHRVIGHPVERCFVLKDSILKLAMERKIELDLDEVAQSNLATIK-----------------------------------------

Query:  -------------------------------------------EKSKHQRKKDPKKLQPKRKRSKKFSQPQQQVMLNKSFSKTFHK-KKKENLATSYC--
                                                    K+K +R K   K +P + +   F QP++ + L + F ++F K   KE L  + C  
Subjt:  -------------------------------------------EKSKHQRKKDPKKLQPKRKRSKKFSQPQQQVMLNKSFSKTFHK-KKKENLATSYC--

Query:  ----------INVEEVDNSKKSEQRTSVFDRIKPPTTRPSVFHRMSMVATEEENQCSMSTSTRPSAFQRLSVSTSKKSRSSTSVFDRLKVTIDQPKRKMN
                  ++ EEVDNS + +QRT VFDRIKP TTR SVF R+SMV  EEENQC MSTST+ S F+RLS+STSKK R STS FDRLK   DQ +R+M 
Subjt:  ----------INVEEVDNSKKSEQRTSVFDRIKPPTTRPSVFHRMSMVATEEENQCSMSTSTRPSAFQRLSVSTSKKSRSSTSVFDRLKVTIDQPKRKMN

Query:  NLELKLF-EEVNSDTKLHSSIPSRMKRKFSVLIN
         L+ KLF EE N D K+H+ + SRMKRK S+ I+
Subjt:  NLELKLF-EEVNSDTKLHSSIPSRMKRKFSVLIN

A0A5A7VII4 Retrotransposon gag protein3.1e-5136.59Show/hide
Query:  VTVMMTETRTMEERMTEMQEHINNLMKAIEEKDSQIEQLKSQIENQHIAESSQTQVVKNHDKGKSI------------------------VQDDHPQCSV
        +++M T+  T E+R+ E+++ IN LMK +EE+D +I  LK+ IE++  AESS    + N DKGK +                        +Q D   C  
Subjt:  VTVMMTETRTMEERMTEMQEHINNLMKAIEEKDSQIEQLKSQIENQHIAESSQTQVVKNHDKGKSI------------------------VQDDHPQCSV

Query:  -------LVASLSIQQ---------------------LEDMITNCI------RSPEEMEKVDDPKYCKYHRVIGHPVERCFVLKDSILKLAMERKIELDL
               ++   +I+Q                     LE ++ N +      + P++  KVDDP YCKYHRVI HPVE+CF+LK  ILKLA E+KIELD+
Subjt:  -------LVASLSIQQ---------------------LEDMITNCI------RSPEEMEKVDDPKYCKYHRVIGHPVERCFVLKDSILKLAMERKIELDL

Query:  DEVAQSNLATIKEKSKHQRKKDPKKLQPKRKRSKKFSQPQQQVMLNKSFSKTFHKKKKENLATSYCINV----------EEVDNSKKSEQRTSVFDRIKP
         EVAQ+N   ++                        S P     LN       H ++   +   + + +          EEVDNS + +QRT VFDRIKP
Subjt:  DEVAQSNLATIKEKSKHQRKKDPKKLQPKRKRSKKFSQPQQQVMLNKSFSKTFHKKKKENLATSYCINV----------EEVDNSKKSEQRTSVFDRIKP

Query:  PTTRPSVFHRMSMVATEEENQCSMSTSTRPSAFQRLSVSTSKKSRSSTSVFDRLKVTIDQPKRKMNNLELKLFEEVNSDTKLHSSIPSRMKRKFSVLINT
          TR S+F R SM   EE+NQC MSTST+ SAF+RLS+STSK+ R  TS FDRLK+T DQ +R+M  L+ K F E N+D K+++ +PS MKRK  V INT
Subjt:  PTTRPSVFHRMSMVATEEENQCSMSTSTRPSAFQRLSVSTSKKSRSSTSVFDRLKVTIDQPKRKMNNLELKLFEEVNSDTKLHSSIPSRMKRKFSVLINT

Query:  E-GSLKFLFSKYEGAPSPSSKALTLLRCSSFSLSSKVLTR
        E GS+      +      S+ + + + C    L   +LTR
Subjt:  E-GSLKFLFSKYEGAPSPSSKALTLLRCSSFSLSSKVLTR

A0A5D3CD55 Ty3-gypsy retrotransposon protein5.3e-5934.98Show/hide
Query:  KASIIASEETTLQGAYTNDKFLVKYNPLFE--PDSDVVTVMMTETRTMEERMTEMQEHINNLMKAIEEKDSQIEQLKSQIENQHIAESSQTQVVKNHDKG
        K  I+  E   +   Y++ +      P  E  P  ++++VM+T   T E RMTE+++ +N LMK +EE+D +I  LK+ IE+   AESS    VKN DKG
Subjt:  KASIIASEETTLQGAYTNDKFLVKYNPLFE--PDSDVVTVMMTETRTMEERMTEMQEHINNLMKAIEEKDSQIEQLKSQIENQHIAESSQTQVVKNHDKG

Query:  KSIVQDDHPQCSVLVASLSIQQLEDMITNCIRS-------------------------------------------------------------------
        K+++Q+   Q S  + SLS+QQL++MI N I++                                                                   
Subjt:  KSIVQDDHPQCSVLVASLSIQQLEDMITNCIRS-------------------------------------------------------------------

Query:  ---------PEEMEKVDDPKYCKYHRVIGHPVERCFVLKDSILKLAMERKIELDLDEVAQSN--------------------------------------
                 PE+ EKVDDP YCKYHRVI HPVE+CFVLK+ ILKLA E+KIELD+DEVAQ+N                                      
Subjt:  ---------PEEMEKVDDPKYCKYHRVIGHPVERCFVLKDSILKLAMERKIELDLDEVAQSN--------------------------------------

Query:  -LATIKEKSKHQRKKD---------------PKKLQ-----------------PKRKRSKK-------------FSQPQQQVMLNKSFSKTF---HKKKK
           TI  ++K    KD               P  +Q                  K  R+KK             F Q ++ + L +   ++F   H ++ 
Subjt:  -LATIKEKSKHQRKKD---------------PKKLQ-----------------PKRKRSKK-------------FSQPQQQVMLNKSFSKTF---HKKKK

Query:  ENLATSYCINVEEVD----------NSKKSEQRTSVFDRIKPPTTRPSVFHRMSMVATEEENQCSMSTSTRPSAFQRLSVSTSKKSRSSTSVFDRLKVTI
          +   +  ++ EVD          NS +  QRTSVFDRIKP TTR SVF R+SM   EEENQC     TR S F+RLS+STSKK R STS FDRLK+T 
Subjt:  ENLATSYCINVEEVD----------NSKKSEQRTSVFDRIKPPTTRPSVFHRMSMVATEEENQCSMSTSTRPSAFQRLSVSTSKKSRSSTSVFDRLKVTI

Query:  DQPKRKMNNLELKLFEEVNSDTKLHSSIPSRMKRKFSVLINTEGSL
        DQ +R+M + + K F E N D K+HS +PSRMKRK SV INTEGSL
Subjt:  DQPKRKMNNLELKLFEEVNSDTKLHSSIPSRMKRKFSVLINTEGSL

A0A5D3CTF5 Retrotransposon gag protein1.4e-5136.59Show/hide
Query:  VTVMMTETRTMEERMTEMQEHINNLMKAIEEKDSQIEQLKSQIENQHIAESSQTQVVKNHDKGKSI------------------------VQDDHPQCSV
        +++M T+  T E+R+ E+++ IN LMK +EE+D +I  LK+ IE++  AESS    + N DKGK +                        +Q D   C  
Subjt:  VTVMMTETRTMEERMTEMQEHINNLMKAIEEKDSQIEQLKSQIENQHIAESSQTQVVKNHDKGKSI------------------------VQDDHPQCSV

Query:  -------LVASLSIQQ---------------------LEDMITNCI------RSPEEMEKVDDPKYCKYHRVIGHPVERCFVLKDSILKLAMERKIELDL
               ++   +I+Q                     LE ++ N +      + P++  KVDDP YCKYHRVI HPVE+CF+LK+ ILKLA E+KIELD+
Subjt:  -------LVASLSIQQ---------------------LEDMITNCI------RSPEEMEKVDDPKYCKYHRVIGHPVERCFVLKDSILKLAMERKIELDL

Query:  DEVAQSNLATIKEKSKHQRKKDPKKLQPKRKRSKKFSQPQQQVMLNKSFSKTFHKKKKENLATSYCINV----------EEVDNSKKSEQRTSVFDRIKP
         EVAQ+N   ++                        S P     LN       H ++   +   + + +          EEVDNS + +QRT VFDRIKP
Subjt:  DEVAQSNLATIKEKSKHQRKKDPKKLQPKRKRSKKFSQPQQQVMLNKSFSKTFHKKKKENLATSYCINV----------EEVDNSKKSEQRTSVFDRIKP

Query:  PTTRPSVFHRMSMVATEEENQCSMSTSTRPSAFQRLSVSTSKKSRSSTSVFDRLKVTIDQPKRKMNNLELKLFEEVNSDTKLHSSIPSRMKRKFSVLINT
          TR S+F R SM   EE+NQC MSTST+ SAF+RLS+STSK+ R  TS FDRLK+T DQ +R+M  L+ K F E N+D K+++ +PS MKRK  V INT
Subjt:  PTTRPSVFHRMSMVATEEENQCSMSTSTRPSAFQRLSVSTSKKSRSSTSVFDRLKVTIDQPKRKMNNLELKLFEEVNSDTKLHSSIPSRMKRKFSVLINT

Query:  E-GSLKFLFSKYEGAPSPSSKALTLLRCSSFSLSSKVLTR
        E GS+      +      S+ + + + C    L   +LTR
Subjt:  E-GSLKFLFSKYEGAPSPSSKALTLLRCSSFSLSSKVLTR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCATTCAAGACTTCTTCGATGGTCGCTGTCGAGATCAAGTCTTACATGGGTTCAACTGCCCATTGTTGCTTCAATGAACTGAGGTTGCAAGAAGATAAAGCT
TCTATCATTGCAAGCGAAGAAACAACCTTGCAGGGGGCATATACCAATGACAAGTTTCTTGTTAAGTATAACCCTCTGTTTGAACCTGATTCTGACGTAGTGACT
GTCATGATGACTGAGACAAGAACTATGGAAGAAAGAATGACTGAGATGCAAGAACACATCAACAACTTGATGAAGGCGATTGAAGAAAAAGATTCTCAAATTGAG
CAACTAAAGAGCCAAATTGAGAACCAACATATCGCCGAATCAAGTCAAACCCAAGTCGTAAAAAATCACGACAAAGGAAAGTCTATAGTGCAAGATGATCATCCA
CAATGTTCTGTTTTGGTCGCTTCACTATCCATCCAACAGCTCGAAGATATGATCACAAACTGTATCAGATCTCCAGAAGAGATGGAGAAAGTCGATGATCCCAAG
TATTGCAAGTATCATCGAGTTATTGGTCATCCAGTGGAAAGATGTTTCGTCCTAAAGGACTCAATTCTAAAGCTGGCTATGGAAAGAAAAATTGAGCTCGACCTT
GATGAAGTAGCTCAATCAAATCTTGCTACAATCAAAGAAAAGAGCAAACATCAAAGAAAGAAGGATCCTAAGAAACTTCAACCCAAGAGAAAGAGAAGTAAAAAG
TTCTCTCAACCTCAACAACAGGTGATGTTGAATAAATCATTCTCCAAAACTTTCCACAAAAAGAAAAAAGAGAACCTTGCGACTTCCTACTGCATCAACGTAGAA
GAAGTTGACAATTCTAAGAAGAGTGAACAAAGGACTTCCGTCTTTGATCGCATCAAGCCTCCAACTACTCGTCCTTCGGTATTCCATAGAATGAGTATGGTCGCG
ACAGAGGAAGAAAATCAATGCTCGATGTCCACCTCCACTCGACCTTCAGCTTTCCAAAGGCTAAGTGTCTCCACATCGAAGAAAAGTCGATCTTCAACATCTGTC
TTTGATCGCCTCAAAGTAACAATCGATCAACCTAAAAGAAAGATGAACAACTTGGAGTTGAAACTTTTCGAAGAAGTAAACAGTGACACGAAGCTTCATAGTAGC
ATCCCGTCGCGTATGAAGAGGAAGTTTTCTGTTCTCATAAATACGGAAGGTTCCTTGAAGTTCCTTTTCTCCAAGTACGAAGGTGCTCCTTCTCCAAGTTCGAAG
GCTCTTACATTGCTGCGATGCAGTTCCTTCTCTCTAAGTTCAAAGGTTCTCACGCGTTCCGCTACAGTTCCTTCTCTCCAAGTACGAAGGTTCTCTCCTCCAAGT
CGGAAGGTTCTCACGTTGCTTCGTCTTAGTTCCTTCTCTCCAAGTACGAAGGTTCTCTCCTCCAAGTCGAAGGTTCTCTCACGTTGCTTCGCTGCAGTTCCTTCC
TCCAAGTTCAAAGGTTTTCATGCGCTTCGCTGCAGTTTCTTCTCCCTAAGTTTGAAGGTTCTCACGCGCTTTGCTGCAGTTCCCTCCTCCCTAAGTTCGAAGTTC
CTTCCTCTAAGTTCGAAGGTTCTCATGCGCTTCGCTGCGCAGTTCCTTCCTCCAAGTTCGAAGGTTCTCATGCGCTTCGCTGCGCAGTTCCTTCCTCCAAGTTCG
AAGGTTCTCATGTGTTTCGCTGCTACCTTCCTCCAAGTTCGAAGGTTCTCTCACGCGCTGCTGCAGTTCCTTCCTCCAAGTTCGAAGGTTCCCTCACGCGCTTCG
CTCGCTCCTTCTCCAAGTTCGAAGGCTCTTCTCTCCGCTGCTCCTTCTCCAAGTTCGAAGGCGCTTCTCTCCACTGCTCCTTCTCCAAGTTCGAAGGCGCTTCTC
TCCACTACTCCTTCTCCAAGTTCAAAGGCGCTTCTCTCTACTGCTCCTTCTCCAAGTTCGAAGGTGCTTCTCTCCACCCCTCCTTTTGAAGGTTCGCCACTGAGG
TTCTCCTTCTCCAAGTTCGAAGGTTCACCGTTGCTCCTTTTCAAATGTTTGGCGGCGGTTGACGGCCTCGTTCCACTCCATCTTCAAATGTTGGCAGTTGACGGC
GTCCACTGCGCTTCATCTTCAAATGTTGGCAGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGTCATTCAAGACTTCTTCGATGGTCGCTGTCGAGATCAAGTCTTACATGGGTTCAACTGCCCATTGTTGCTTCAATGAACTGAGGTTGCAAGAAGATAAAGCT
TCTATCATTGCAAGCGAAGAAACAACCTTGCAGGGGGCATATACCAATGACAAGTTTCTTGTTAAGTATAACCCTCTGTTTGAACCTGATTCTGACGTAGTGACT
GTCATGATGACTGAGACAAGAACTATGGAAGAAAGAATGACTGAGATGCAAGAACACATCAACAACTTGATGAAGGCGATTGAAGAAAAAGATTCTCAAATTGAG
CAACTAAAGAGCCAAATTGAGAACCAACATATCGCCGAATCAAGTCAAACCCAAGTCGTAAAAAATCACGACAAAGGAAAGTCTATAGTGCAAGATGATCATCCA
CAATGTTCTGTTTTGGTCGCTTCACTATCCATCCAACAGCTCGAAGATATGATCACAAACTGTATCAGATCTCCAGAAGAGATGGAGAAAGTCGATGATCCCAAG
TATTGCAAGTATCATCGAGTTATTGGTCATCCAGTGGAAAGATGTTTCGTCCTAAAGGACTCAATTCTAAAGCTGGCTATGGAAAGAAAAATTGAGCTCGACCTT
GATGAAGTAGCTCAATCAAATCTTGCTACAATCAAAGAAAAGAGCAAACATCAAAGAAAGAAGGATCCTAAGAAACTTCAACCCAAGAGAAAGAGAAGTAAAAAG
TTCTCTCAACCTCAACAACAGGTGATGTTGAATAAATCATTCTCCAAAACTTTCCACAAAAAGAAAAAAGAGAACCTTGCGACTTCCTACTGCATCAACGTAGAA
GAAGTTGACAATTCTAAGAAGAGTGAACAAAGGACTTCCGTCTTTGATCGCATCAAGCCTCCAACTACTCGTCCTTCGGTATTCCATAGAATGAGTATGGTCGCG
ACAGAGGAAGAAAATCAATGCTCGATGTCCACCTCCACTCGACCTTCAGCTTTCCAAAGGCTAAGTGTCTCCACATCGAAGAAAAGTCGATCTTCAACATCTGTC
TTTGATCGCCTCAAAGTAACAATCGATCAACCTAAAAGAAAGATGAACAACTTGGAGTTGAAACTTTTCGAAGAAGTAAACAGTGACACGAAGCTTCATAGTAGC
ATCCCGTCGCGTATGAAGAGGAAGTTTTCTGTTCTCATAAATACGGAAGGTTCCTTGAAGTTCCTTTTCTCCAAGTACGAAGGTGCTCCTTCTCCAAGTTCGAAG
GCTCTTACATTGCTGCGATGCAGTTCCTTCTCTCTAAGTTCAAAGGTTCTCACGCGTTCCGCTACAGTTCCTTCTCTCCAAGTACGAAGGTTCTCTCCTCCAAGT
CGGAAGGTTCTCACGTTGCTTCGTCTTAGTTCCTTCTCTCCAAGTACGAAGGTTCTCTCCTCCAAGTCGAAGGTTCTCTCACGTTGCTTCGCTGCAGTTCCTTCC
TCCAAGTTCAAAGGTTTTCATGCGCTTCGCTGCAGTTTCTTCTCCCTAAGTTTGAAGGTTCTCACGCGCTTTGCTGCAGTTCCCTCCTCCCTAAGTTCGAAGTTC
CTTCCTCTAAGTTCGAAGGTTCTCATGCGCTTCGCTGCGCAGTTCCTTCCTCCAAGTTCGAAGGTTCTCATGCGCTTCGCTGCGCAGTTCCTTCCTCCAAGTTCG
AAGGTTCTCATGTGTTTCGCTGCTACCTTCCTCCAAGTTCGAAGGTTCTCTCACGCGCTGCTGCAGTTCCTTCCTCCAAGTTCGAAGGTTCCCTCACGCGCTTCG
CTCGCTCCTTCTCCAAGTTCGAAGGCTCTTCTCTCCGCTGCTCCTTCTCCAAGTTCGAAGGCGCTTCTCTCCACTGCTCCTTCTCCAAGTTCGAAGGCGCTTCTC
TCCACTACTCCTTCTCCAAGTTCAAAGGCGCTTCTCTCTACTGCTCCTTCTCCAAGTTCGAAGGTGCTTCTCTCCACCCCTCCTTTTGAAGGTTCGCCACTGAGG
TTCTCCTTCTCCAAGTTCGAAGGTTCACCGTTGCTCCTTTTCAAATGTTTGGCGGCGGTTGACGGCCTCGTTCCACTCCATCTTCAAATGTTGGCAGTTGACGGC
GTCCACTGCGCTTCATCTTCAAATGTTGGCAGTTGA
Protein sequenceShow/hide protein sequence
MSFKTSSMVAVEIKSYMGSTAHCCFNELRLQEDKASIIASEETTLQGAYTNDKFLVKYNPLFEPDSDVVTVMMTETRTMEERMTEMQEHINNLMKAIEEKDSQIE
QLKSQIENQHIAESSQTQVVKNHDKGKSIVQDDHPQCSVLVASLSIQQLEDMITNCIRSPEEMEKVDDPKYCKYHRVIGHPVERCFVLKDSILKLAMERKIELDL
DEVAQSNLATIKEKSKHQRKKDPKKLQPKRKRSKKFSQPQQQVMLNKSFSKTFHKKKKENLATSYCINVEEVDNSKKSEQRTSVFDRIKPPTTRPSVFHRMSMVA
TEEENQCSMSTSTRPSAFQRLSVSTSKKSRSSTSVFDRLKVTIDQPKRKMNNLELKLFEEVNSDTKLHSSIPSRMKRKFSVLINTEGSLKFLFSKYEGAPSPSSK
ALTLLRCSSFSLSSKVLTRSATVPSLQVRRFSPPSRKVLTLLRLSSFSPSTKVLSSKSKVLSRCFAAVPSSKFKGFHALRCSFFSLSLKVLTRFAAVPSSLSSKF
LPLSSKVLMRFAAQFLPPSSKVLMRFAAQFLPPSSKVLMCFAATFLQVRRFSHALLQFLPPSSKVPSRASLAPSPSSKALLSAAPSPSSKALLSTAPSPSSKALL
STTPSPSSKALLSTAPSPSSKVLLSTPPFEGSPLRFSFSKFEGSPLLLFKCLAAVDGLVPLHLQMLAVDGVHCASSSNVGS