; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0032329 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0032329
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationchr11:30578051..30578497
RNA-Seq ExpressionLag0032329
SyntenyLag0032329
Gene Ontology termsNA
InterPro domainsIPR036691 - Endonuclease/exonuclease/phosphatase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TXG59697.1 hypothetical protein EZV62_014270 [Acer yangbiense]1.6e-1748.98Show/hide
Query:  ETKIQNRKSDWVRIQLQFDCGLIVPRSGLSGGLMLLWNRETDVTIRSFSKGHIDAIVKDKQG-SWRFSGIYGNPHRDAHYETWALMNRLKDNSGLPWV
        ETK+   K+  ++  LQF  G IV   G+SG LMLLW +E  V+I+SFS GHIDA ++ + G +WRFSG YG+P       +WAL+ RL+D + LPWV
Subjt:  ETKIQNRKSDWVRIQLQFDCGLIVPRSGLSGGLMLLWNRETDVTIRSFSKGHIDAIVKDKQG-SWRFSGIYGNPHRDAHYETWALMNRLKDNSGLPWV

XP_022157437.1 uncharacterized protein LOC111024135 [Momordica charantia]1.1e-1847.47Show/hide
Query:  ETKIQNRKSDWVRIQLQFDCGLIVPRSGLSGGLMLLWNRETDVTIRSFSKGHIDAIVKDKQGSWRFSGIYGNPHRDAHYETWALMNRLKDNSGLPWVLG
        ETK         + +L FDC + V  +G SGGLMLLWN +++V I+S S GHID+I+ DK GSWRF+G YGNP       +W L+ RL     LPW++G
Subjt:  ETKIQNRKSDWVRIQLQFDCGLIVPRSGLSGGLMLLWNRETDVTIRSFSKGHIDAIVKDKQGSWRFSGIYGNPHRDAHYETWALMNRLKDNSGLPWVLG

XP_023871998.1 uncharacterized protein LOC111984613 [Quercus suber]2.5e-1847Show/hide
Query:  METKIQNRKSDWVRIQLQFDCGLIVPRSGLSGGLMLLWNRETDVTIRSFSKGHIDAIVKDKQGS--WRFSGIYGNPHRDAHYETWALMNRLKDNSGLPWV
        METK+   + D ++  L+   GL+VP    SGGL+LLW +E  V+++S+S+ HIDAIV    GS  WRF+G YGNP      E+W L+ RL  N+ LPWV
Subjt:  METKIQNRKSDWVRIQLQFDCGLIVPRSGLSGGLMLLWNRETDVTIRSFSKGHIDAIVKDKQGS--WRFSGIYGNPHRDAHYETWALMNRLKDNSGLPWV

XP_023903659.1 uncharacterized protein LOC112015491 [Quercus suber]2.5e-1847Show/hide
Query:  METKIQNRKSDWVRIQLQFDCGLIVPRSGLSGGLMLLWNRETDVTIRSFSKGHIDAIVKDKQGS--WRFSGIYGNPHRDAHYETWALMNRLKDNSGLPWV
        METK+   + D ++  L+   GL+VP    SGGL+LLW +E  V+++S+S+ HIDAIV    GS  WRF+G YGNP      E+W L+ RL  N+ LPWV
Subjt:  METKIQNRKSDWVRIQLQFDCGLIVPRSGLSGGLMLLWNRETDVTIRSFSKGHIDAIVKDKQGS--WRFSGIYGNPHRDAHYETWALMNRLKDNSGLPWV

XP_028068804.1 uncharacterized protein LOC114271378 [Camellia sinensis]4.3e-1837.68Show/hide
Query:  METKIQNRKSDWVRIQLQFDCGLIVPRSGLSGGLMLLWNRETDVTIRSFSKGHIDAIVKDKQ--GSWRFSGIYGNPHRDAHYETWALMNRLKDNSGLPWV
        METK  +RK +W R +L    GL V R GLSGGL L W     V+IR++S GH+DA+V+     G+WRF+G YG+P     +++W L+ RL     LPW+
Subjt:  METKIQNRKSDWVRIQLQFDCGLIVPRSGLSGGLMLLWNRETDVTIRSFSKGHIDAIVKDKQ--GSWRFSGIYGNPHRDAHYETWALMNRLKDNSGLPWV

Query:  LGEISTKSLATMRKWEVCSGMKGRCKTLEKALIFVTLA
        + E   + L    K  +    + +    + AL   +LA
Subjt:  LGEISTKSLATMRKWEVCSGMKGRCKTLEKALIFVTLA

TrEMBL top hitse value%identityAlignment
A0A2N9FP20 Reverse transcriptase domain-containing protein6.1e-1848Show/hide
Query:  METKIQNRKSDWVRIQLQFDCGLIVPRSGLSGGLMLLWNRETDVTIRSFSKGHIDAIVK-DKQGSWRFSGIYGNPHRDAHYETWALMNRLKDNSGLPWVL
        METK+  R+ ++VRI+L+F     VP  G SGGL LLWN E +++I++FS  HIDA V+   +  WRF+G YGNP      E+WAL+ +L+  S LPW+L
Subjt:  METKIQNRKSDWVRIQLQFDCGLIVPRSGLSGGLMLLWNRETDVTIRSFSKGHIDAIVK-DKQGSWRFSGIYGNPHRDAHYETWALMNRLKDNSGLPWVL

A0A2N9G933 Reverse transcriptase domain-containing protein6.1e-1848Show/hide
Query:  METKIQNRKSDWVRIQLQFDCGLIVPRSGLSGGLMLLWNRETDVTIRSFSKGHIDAIVK-DKQGSWRFSGIYGNPHRDAHYETWALMNRLKDNSGLPWVL
        METK+  R+ ++VRI+L+F     VP  G SGGL LLWN E +++I++FS  HIDA V+   +  WRF+G YGNP      E+WAL+ +L+  S LPW+L
Subjt:  METKIQNRKSDWVRIQLQFDCGLIVPRSGLSGGLMLLWNRETDVTIRSFSKGHIDAIVK-DKQGSWRFSGIYGNPHRDAHYETWALMNRLKDNSGLPWVL

A0A2N9GQE6 Reverse transcriptase domain-containing protein4.7e-1838.64Show/hide
Query:  METKIQNRKSDWVRIQLQFDCGLIVPRSGLSGGLMLLWNRETDVTIRSFSKGHIDAIVK-DKQGSWRFSGIYGNPHRDAHYETWALMNRLKDNSGLPWV-
        METK+  +K + +R+ L+F     +P  G SGGL LLWN   ++ I+++++ HIDA V+     SWRF+G YG+P    H E+WAL+NRL     LPW+ 
Subjt:  METKIQNRKSDWVRIQLQFDCGLIVPRSGLSGGLMLLWNRETDVTIRSFSKGHIDAIVK-DKQGSWRFSGIYGNPHRDAHYETWALMNRLKDNSGLPWV-

Query:  LGEISTKSLATMRKWEVCSGMKGRCKTLEKAL
        +G+ +       R  EV  GM GR +   + +
Subjt:  LGEISTKSLATMRKWEVCSGMKGRCKTLEKAL

A0A2N9I611 Uncharacterized protein2.9e-2044.33Show/hide
Query:  ETKIQNRKSDWVRIQLQFDCGLIVPRSGLSGGLMLLWNRETDVTIRSFSKGHIDAIVKDKQGSWRFSGIYGNPHRDAHYETWALMNRLKDNSGLPWV
        ETK+   + +W+R+ L++D   +VP  G SGGL LLW+ + D++I S+++ HIDA +K ++G WRF+G YG+P       +WAL+  LK+ S LPWV
Subjt:  ETKIQNRKSDWVRIQLQFDCGLIVPRSGLSGGLMLLWNRETDVTIRSFSKGHIDAIVKDKQGSWRFSGIYGNPHRDAHYETWALMNRLKDNSGLPWV

A0A6J1DUG8 uncharacterized protein LOC1110241355.5e-1947.47Show/hide
Query:  ETKIQNRKSDWVRIQLQFDCGLIVPRSGLSGGLMLLWNRETDVTIRSFSKGHIDAIVKDKQGSWRFSGIYGNPHRDAHYETWALMNRLKDNSGLPWVLG
        ETK         + +L FDC + V  +G SGGLMLLWN +++V I+S S GHID+I+ DK GSWRF+G YGNP       +W L+ RL     LPW++G
Subjt:  ETKIQNRKSDWVRIQLQFDCGLIVPRSGLSGGLMLLWNRETDVTIRSFSKGHIDAIVKDKQGSWRFSGIYGNPHRDAHYETWALMNRLKDNSGLPWVLG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAACCAAAATTCAGAATAGGAAAAGTGATTGGGTGCGAATTCAACTTCAGTTTGATTGTGGTTTGATAGTTCCTCGTTCGGGTTTAAGTGGTGGTCTAATGCTACT
ATGGAACAGGGAGACTGATGTTACTATTAGATCTTTTTCTAAGGGACATATTGATGCAATTGTCAAGGATAAACAGGGCTCTTGGAGGTTCTCTGGAATTTATGGAAACC
CACATCGAGATGCACACTATGAGACGTGGGCTTTGATGAATCGATTAAAAGACAACTCTGGATTACCATGGGTTCTGGGGGAGATTTCAACGAAATCACTAGCAACAATG
AGAAAATGGGAGGTGTGCAGCGGAATGAAAGGGCGATGCAAGACTTTAGAGAAAGCATTGATATTTGTAACCTTAGCGATCCGGGTTTATTGGACCAGAGTATACTTGGT
GCAATAA
mRNA sequenceShow/hide mRNA sequence
ATGGAAACCAAAATTCAGAATAGGAAAAGTGATTGGGTGCGAATTCAACTTCAGTTTGATTGTGGTTTGATAGTTCCTCGTTCGGGTTTAAGTGGTGGTCTAATGCTACT
ATGGAACAGGGAGACTGATGTTACTATTAGATCTTTTTCTAAGGGACATATTGATGCAATTGTCAAGGATAAACAGGGCTCTTGGAGGTTCTCTGGAATTTATGGAAACC
CACATCGAGATGCACACTATGAGACGTGGGCTTTGATGAATCGATTAAAAGACAACTCTGGATTACCATGGGTTCTGGGGGAGATTTCAACGAAATCACTAGCAACAATG
AGAAAATGGGAGGTGTGCAGCGGAATGAAAGGGCGATGCAAGACTTTAGAGAAAGCATTGATATTTGTAACCTTAGCGATCCGGGTTTATTGGACCAGAGTATACTTGGT
GCAATAA
Protein sequenceShow/hide protein sequence
METKIQNRKSDWVRIQLQFDCGLIVPRSGLSGGLMLLWNRETDVTIRSFSKGHIDAIVKDKQGSWRFSGIYGNPHRDAHYETWALMNRLKDNSGLPWVLGEISTKSLATM
RKWEVCSGMKGRCKTLEKALIFVTLAIRVYWTRVYLVQ