; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0032338 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0032338
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionMediator of RNA polymerase II transcription subunit 21
Genome locationchr11:30856644..30863667
RNA-Seq ExpressionLag0032338
SyntenyLag0032338
Gene Ontology termsGO:0006357 - regulation of transcription by RNA polymerase II (biological process)
GO:0050832 - defense response to fungus (biological process)
GO:0016592 - mediator complex (cellular component)
GO:0043078 - polar nucleus (cellular component)
GO:0003712 - transcription coregulator activity (molecular function)
InterPro domainsIPR021384 - Mediator complex, subunit Med21
IPR037212 - Mediator complex, subunit Med7/Med21-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6605829.1 Mediator of RNA polymerase II transcription subunit 21, partial [Cucurbita argyrosperma subsp. sororia]9.4e-6497.83Show/hide
Query:  MDIISQLQEQVNTIAALAFNTFGTLQRDAPPVRLSPNYPEPPPHEPTEDNANIAEQPKLMSAALVKAAKQFDVLVAALPLSDGGEEEQLKRIAELQAEND
        MDIISQLQEQVNTIAALAFNTFGTLQRDAPPVRLSPNYPEPPPHEPTED+AN AEQPKLMSAALVKAAKQFDVLVAALPLSDGGEEEQLKRIAELQAEND
Subjt:  MDIISQLQEQVNTIAALAFNTFGTLQRDAPPVRLSPNYPEPPPHEPTEDNANIAEQPKLMSAALVKAAKQFDVLVAALPLSDGGEEEQLKRIAELQAEND

Query:  AVGQELQKQLEAAEKELKQVQELFSQVADNCLNLKKAD
        AVGQELQKQLEAAEKELKQVQELFSQVADNC+NLKKAD
Subjt:  AVGQELQKQLEAAEKELKQVQELFSQVADNCLNLKKAD

XP_022153730.1 mediator of RNA polymerase II transcription subunit 21 [Momordica charantia]1.1e-6197.1Show/hide
Query:  MDIISQLQEQVNTIAALAFNTFGTLQRDAPPVRLSPNYPEPPPHEPTEDNANIAEQPKLMSAALVKAAKQFDVLVAALPLSDGGEEEQLKRIAELQAEND
        MDIISQLQEQVNTIAALAFNTFGTLQRDAPPVRLS NYPEPP  EPTED+ANIAEQPKLMSAALVKAAKQFDVLVAALPLSDGGEEEQLKRIAELQAEND
Subjt:  MDIISQLQEQVNTIAALAFNTFGTLQRDAPPVRLSPNYPEPPPHEPTEDNANIAEQPKLMSAALVKAAKQFDVLVAALPLSDGGEEEQLKRIAELQAEND

Query:  AVGQELQKQLEAAEKELKQVQELFSQVADNCLNLKKAD
        AVGQELQKQLEAAEKELKQVQELFSQVADNCLNLKKAD
Subjt:  AVGQELQKQLEAAEKELKQVQELFSQVADNCLNLKKAD

XP_022958635.1 mediator of RNA polymerase II transcription subunit 21 [Cucurbita moschata]5.5e-6498.55Show/hide
Query:  MDIISQLQEQVNTIAALAFNTFGTLQRDAPPVRLSPNYPEPPPHEPTEDNANIAEQPKLMSAALVKAAKQFDVLVAALPLSDGGEEEQLKRIAELQAEND
        MDIISQLQEQVNTIAALAFNTFGTLQRDAPPVRLSPNYPEPPPHEPTED+AN AEQPKLMSAALVKAAKQFDVLVAALPLSDGGEEEQLKRIAELQAEND
Subjt:  MDIISQLQEQVNTIAALAFNTFGTLQRDAPPVRLSPNYPEPPPHEPTEDNANIAEQPKLMSAALVKAAKQFDVLVAALPLSDGGEEEQLKRIAELQAEND

Query:  AVGQELQKQLEAAEKELKQVQELFSQVADNCLNLKKAD
        AVGQELQKQLEAAEKELKQVQELFSQVADNCLNLKKAD
Subjt:  AVGQELQKQLEAAEKELKQVQELFSQVADNCLNLKKAD

XP_023532119.1 mediator of RNA polymerase II transcription subunit 21 [Cucurbita pepo subsp. pepo]3.6e-6397.1Show/hide
Query:  MDIISQLQEQVNTIAALAFNTFGTLQRDAPPVRLSPNYPEPPPHEPTEDNANIAEQPKLMSAALVKAAKQFDVLVAALPLSDGGEEEQLKRIAELQAEND
        MDIISQLQEQVNTIAALAFNTFGTLQRDAPPVRLSPNYPEPPPHEPT+D+AN  EQPKLMSAALVKAAKQFDVLVAALPLSDGGEEEQLKRIAELQAEND
Subjt:  MDIISQLQEQVNTIAALAFNTFGTLQRDAPPVRLSPNYPEPPPHEPTEDNANIAEQPKLMSAALVKAAKQFDVLVAALPLSDGGEEEQLKRIAELQAEND

Query:  AVGQELQKQLEAAEKELKQVQELFSQVADNCLNLKKAD
        AVGQELQKQLEAAEKELKQVQELFSQVADNCLNLKKAD
Subjt:  AVGQELQKQLEAAEKELKQVQELFSQVADNCLNLKKAD

XP_038893979.1 mediator of RNA polymerase II transcription subunit 21-like [Benincasa hispida]7.4e-6194.93Show/hide
Query:  MDIISQLQEQVNTIAALAFNTFGTLQRDAPPVRLSPNYPEPPPHEPTEDNANIAEQPKLMSAALVKAAKQFDVLVAALPLSDGGEEEQLKRIAELQAEND
        MDIISQLQEQVN IAALAFNTFGTLQRDAPPVRLSPNYPEPP HEPTED+ANIAEQPKLMSAALVKAAKQFD LVAALPLSDGGEEEQLKRIAELQAEND
Subjt:  MDIISQLQEQVNTIAALAFNTFGTLQRDAPPVRLSPNYPEPPPHEPTEDNANIAEQPKLMSAALVKAAKQFDVLVAALPLSDGGEEEQLKRIAELQAEND

Query:  AVGQELQKQLEAAEKELKQVQELFSQVADNCLNLKKAD
        AVGQELQKQL+AAE+EL QVQELFSQVADNCLNLKKAD
Subjt:  AVGQELQKQLEAAEKELKQVQELFSQVADNCLNLKKAD

TrEMBL top hitse value%identityAlignment
A0A0A0KZ00 Mediator of RNA polymerase II transcription subunit 211.0e-6094.93Show/hide
Query:  MDIISQLQEQVNTIAALAFNTFGTLQRDAPPVRLSPNYPEPPPHEPTEDNANIAEQPKLMSAALVKAAKQFDVLVAALPLSDGGEEEQLKRIAELQAEND
        MDIISQLQEQVNTIAALAFNTFGTLQRDAPPVRLSPNYPEPP  EPTEDNA IAEQPKLMSAALVKAAKQFD LVAALPLSDGGEEEQLKRIAELQAEND
Subjt:  MDIISQLQEQVNTIAALAFNTFGTLQRDAPPVRLSPNYPEPPPHEPTEDNANIAEQPKLMSAALVKAAKQFDVLVAALPLSDGGEEEQLKRIAELQAEND

Query:  AVGQELQKQLEAAEKELKQVQELFSQVADNCLNLKKAD
         VGQELQKQL+AAEKEL QVQELFSQVADNCLNLKKAD
Subjt:  AVGQELQKQLEAAEKELKQVQELFSQVADNCLNLKKAD

A0A5A7TEZ9 Mediator of RNA polymerase II transcription subunit 211.2e-5993.48Show/hide
Query:  MDIISQLQEQVNTIAALAFNTFGTLQRDAPPVRLSPNYPEPPPHEPTEDNANIAEQPKLMSAALVKAAKQFDVLVAALPLSDGGEEEQLKRIAELQAEND
        MDIISQLQEQVNTIAALAFNTFGTLQRDAPPVRLSPNYPEPP  EPTED+A IAEQPKLMSAALVKAAKQFD LVAALPLSDGGEEEQLKRIAELQAEND
Subjt:  MDIISQLQEQVNTIAALAFNTFGTLQRDAPPVRLSPNYPEPPPHEPTEDNANIAEQPKLMSAALVKAAKQFDVLVAALPLSDGGEEEQLKRIAELQAEND

Query:  AVGQELQKQLEAAEKELKQVQELFSQVADNCLNLKKAD
         VGQELQKQL+AAE+EL QVQELFSQVADNCLNLKKAD
Subjt:  AVGQELQKQLEAAEKELKQVQELFSQVADNCLNLKKAD

A0A6J1DHM9 Mediator of RNA polymerase II transcription subunit 215.5e-6297.1Show/hide
Query:  MDIISQLQEQVNTIAALAFNTFGTLQRDAPPVRLSPNYPEPPPHEPTEDNANIAEQPKLMSAALVKAAKQFDVLVAALPLSDGGEEEQLKRIAELQAEND
        MDIISQLQEQVNTIAALAFNTFGTLQRDAPPVRLS NYPEPP  EPTED+ANIAEQPKLMSAALVKAAKQFDVLVAALPLSDGGEEEQLKRIAELQAEND
Subjt:  MDIISQLQEQVNTIAALAFNTFGTLQRDAPPVRLSPNYPEPPPHEPTEDNANIAEQPKLMSAALVKAAKQFDVLVAALPLSDGGEEEQLKRIAELQAEND

Query:  AVGQELQKQLEAAEKELKQVQELFSQVADNCLNLKKAD
        AVGQELQKQLEAAEKELKQVQELFSQVADNCLNLKKAD
Subjt:  AVGQELQKQLEAAEKELKQVQELFSQVADNCLNLKKAD

A0A6J1H2M0 Mediator of RNA polymerase II transcription subunit 212.7e-6498.55Show/hide
Query:  MDIISQLQEQVNTIAALAFNTFGTLQRDAPPVRLSPNYPEPPPHEPTEDNANIAEQPKLMSAALVKAAKQFDVLVAALPLSDGGEEEQLKRIAELQAEND
        MDIISQLQEQVNTIAALAFNTFGTLQRDAPPVRLSPNYPEPPPHEPTED+AN AEQPKLMSAALVKAAKQFDVLVAALPLSDGGEEEQLKRIAELQAEND
Subjt:  MDIISQLQEQVNTIAALAFNTFGTLQRDAPPVRLSPNYPEPPPHEPTEDNANIAEQPKLMSAALVKAAKQFDVLVAALPLSDGGEEEQLKRIAELQAEND

Query:  AVGQELQKQLEAAEKELKQVQELFSQVADNCLNLKKAD
        AVGQELQKQLEAAEKELKQVQELFSQVADNCLNLKKAD
Subjt:  AVGQELQKQLEAAEKELKQVQELFSQVADNCLNLKKAD

A0A6J1K432 Mediator of RNA polymerase II transcription subunit 212.7e-6498.55Show/hide
Query:  MDIISQLQEQVNTIAALAFNTFGTLQRDAPPVRLSPNYPEPPPHEPTEDNANIAEQPKLMSAALVKAAKQFDVLVAALPLSDGGEEEQLKRIAELQAEND
        MDIISQLQEQVNTIAALAFNTFGTLQRDAPPVRLSPNYPEPPPHEPTED+AN AEQPKLMSAALVKAAKQFDVLVAALPLSDGGEEEQLKRIAELQAEND
Subjt:  MDIISQLQEQVNTIAALAFNTFGTLQRDAPPVRLSPNYPEPPPHEPTEDNANIAEQPKLMSAALVKAAKQFDVLVAALPLSDGGEEEQLKRIAELQAEND

Query:  AVGQELQKQLEAAEKELKQVQELFSQVADNCLNLKKAD
        AVGQELQKQLEAAEKELKQVQELFSQVADNCLNLKKAD
Subjt:  AVGQELQKQLEAAEKELKQVQELFSQVADNCLNLKKAD

SwissProt top hitse value%identityAlignment
C0LU16 Mediator of RNA polymerase II transcription subunit 212.7e-5079.14Show/hide
Query:  MDIISQLQEQVNTIAALAFNTFGTLQRDAPPVRLSPNYPEPPPHEPTEDNAN-IAEQPKLMSAALVKAAKQFDVLVAALPLSDGGEEEQLKRIAELQAEN
        MDIISQLQEQVNTIAA+ FN FGTLQRDAPPV+LSPNYPEPP      D+A    EQPK +SA LVKAAKQFD LVAALPLS+GGE  QLKRIAELQ EN
Subjt:  MDIISQLQEQVNTIAALAFNTFGTLQRDAPPVRLSPNYPEPPPHEPTEDNAN-IAEQPKLMSAALVKAAKQFDVLVAALPLSDGGEEEQLKRIAELQAEN

Query:  DAVGQELQKQLEAAEKELKQVQELFSQVADNCLNLKKAD
        D VGQELQKQLEAAEKELKQVQELF Q ADNCLN+KK +
Subjt:  DAVGQELQKQLEAAEKELKQVQELFSQVADNCLNLKKAD

Q2TBU8 Mediator of RNA polymerase II transcription subunit 216.6e-0427.01Show/hide
Query:  DIISQLQEQVNTIAALAFNTFGTLQRDAPPVRLS---PNYPEPPPHEPTEDNANIAEQPKLMSAALVKAAKQFDVLVAALPLSDGGEEEQLKRIAELQAE
        D ++QLQ+ VN++A    N  G LQ+  PP   S       +  P  PTE+ A      +L +A + + AK  DVL+ +LP  +     Q   + +L+ E
Subjt:  DIISQLQEQVNTIAALAFNTFGTLQRDAPPVRLS---PNYPEPPPHEPTEDNANIAEQPKLMSAALVKAAKQFDVLVAALPLSDGGEEEQLKRIAELQAE

Query:  NDAVGQELQKQLEAAEKELKQVQELFSQVADNCLNLK
        N      L+  +   +  L+++Q   + +A + L  +
Subjt:  NDAVGQELQKQLEAAEKELKQVQELFSQVADNCLNLK

Q7ZTI5 Mediator of RNA polymerase II transcription subunit 217.8e-0527.74Show/hide
Query:  DIISQLQEQVNTIAALAFNTFGTLQRDAPPVRLS---PNYPEPPPHEPTEDNANIAEQPKLMSAALVKAAKQFDVLVAALPLSDGGEEEQLKRIAELQAE
        D ++QLQ+ VN++A    N  G LQ+ APP   S       +  P  PTE+ A      +L +A + + AK  DVL+ +LP  +     Q   + +L+ E
Subjt:  DIISQLQEQVNTIAALAFNTFGTLQRDAPPVRLS---PNYPEPPPHEPTEDNANIAEQPKLMSAALVKAAKQFDVLVAALPLSDGGEEEQLKRIAELQAE

Query:  NDAVGQELQKQLEAAEKELKQVQELFSQVADNCLNLK
        N      L++ +   +  L+++Q   + +A + L  +
Subjt:  NDAVGQELQKQLEAAEKELKQVQELFSQVADNCLNLK

Arabidopsis top hitse value%identityAlignment
AT4G04780.1 mediator 212.0e-5179.14Show/hide
Query:  MDIISQLQEQVNTIAALAFNTFGTLQRDAPPVRLSPNYPEPPPHEPTEDNAN-IAEQPKLMSAALVKAAKQFDVLVAALPLSDGGEEEQLKRIAELQAEN
        MDIISQLQEQVNTIAA+ FN FGTLQRDAPPV+LSPNYPEPP      D+A    EQPK +SA LVKAAKQFD LVAALPLS+GGE  QLKRIAELQ EN
Subjt:  MDIISQLQEQVNTIAALAFNTFGTLQRDAPPVRLSPNYPEPPPHEPTEDNAN-IAEQPKLMSAALVKAAKQFDVLVAALPLSDGGEEEQLKRIAELQAEN

Query:  DAVGQELQKQLEAAEKELKQVQELFSQVADNCLNLKKAD
        D VGQELQKQLEAAEKELKQVQELF Q ADNCLN+KK +
Subjt:  DAVGQELQKQLEAAEKELKQVQELFSQVADNCLNLKKAD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGCTGCAACTGCCCTCGTGTTTCTTTCGCTCGTGCCACCGCAACCTCCTCCAGTGATTTGCATCGATCTTCCATTCTCTTGTTGCTATTGTCTCTCTCTCTCCCTCG
CGTGACCGCCTCCGCCAGCCACCACCGCCGGAGTTCACGCCGCGCCGCCGCCGCCGTTCGAGCCATCGCGTCGTCGCCTTCCCGTCGCAGCGCCGTCGTCTCTCTGCACG
TCTTCTTCTCCACGCAAGCAACCGCCGTTGCCGCCCATCTTCGCGATTCTCTCTCTCTTAGTTTTTGGTTCGCGTGGAAGCCGCCCCCAGCCGCCAGTGTCCTCGCCGTC
GCCGCCAGCACCTCCCAGCTGTCGCCACCGTCGTCGCGCCGTAGTGCAGCAGCAACCGTCAGCGTCGCCGTCTTCTGCGCGGTCTCTCCCTCTCTTTTGCGTTTTTCAGC
CTTAAACCTGTGGATCTTGCGTCCTAGCAGCTCGAAGCCTCAGTTCCGCGCGATTTCGCCTCTGTCCAGCGGTGTTTTGGCTTCGTTTTGGATCGTTACGGCATCGCTTA
ACGTTTCCGGAGCTTTCTTGGTCTACCTTGAGTTGTTGAAGTGCTTTAGGAGCATTCGAGGAATAAGGTTCAAGATGGACATAATTTCCCAACTACAGGAACAAGTCAAC
ACCATTGCTGCTTTAGCTTTCAACACATTTGGGACATTACAAAGAGATGCTCCTCCAGTTCGTTTATCCCCTAATTATCCTGAACCGCCGCCTCATGAACCTACAGAGGA
CAATGCAAATATCGCAGAGCAACCCAAACTAATGAGTGCTGCTTTGGTGAAAGCTGCTAAGCAGTTTGATGTATTGGTTGCAGCATTGCCTTTATCTGATGGGGGTGAAG
AAGAGCAGTTGAAAAGGATTGCAGAACTACAGGCTGAGAACGATGCTGTAGGTCAAGAACTTCAAAAGCAGCTAGAAGCAGCAGAGAAAGAATTAAAACAGGTTCAGGAG
CTTTTCAGCCAAGTTGCAGATAATTGCTTGAACTTGAAGAAAGCAGATTGA
mRNA sequenceShow/hide mRNA sequence
ATGTGCTGCAACTGCCCTCGTGTTTCTTTCGCTCGTGCCACCGCAACCTCCTCCAGTGATTTGCATCGATCTTCCATTCTCTTGTTGCTATTGTCTCTCTCTCTCCCTCG
CGTGACCGCCTCCGCCAGCCACCACCGCCGGAGTTCACGCCGCGCCGCCGCCGCCGTTCGAGCCATCGCGTCGTCGCCTTCCCGTCGCAGCGCCGTCGTCTCTCTGCACG
TCTTCTTCTCCACGCAAGCAACCGCCGTTGCCGCCCATCTTCGCGATTCTCTCTCTCTTAGTTTTTGGTTCGCGTGGAAGCCGCCCCCAGCCGCCAGTGTCCTCGCCGTC
GCCGCCAGCACCTCCCAGCTGTCGCCACCGTCGTCGCGCCGTAGTGCAGCAGCAACCGTCAGCGTCGCCGTCTTCTGCGCGGTCTCTCCCTCTCTTTTGCGTTTTTCAGC
CTTAAACCTGTGGATCTTGCGTCCTAGCAGCTCGAAGCCTCAGTTCCGCGCGATTTCGCCTCTGTCCAGCGGTGTTTTGGCTTCGTTTTGGATCGTTACGGCATCGCTTA
ACGTTTCCGGAGCTTTCTTGGTCTACCTTGAGTTGTTGAAGTGCTTTAGGAGCATTCGAGGAATAAGGTTCAAGATGGACATAATTTCCCAACTACAGGAACAAGTCAAC
ACCATTGCTGCTTTAGCTTTCAACACATTTGGGACATTACAAAGAGATGCTCCTCCAGTTCGTTTATCCCCTAATTATCCTGAACCGCCGCCTCATGAACCTACAGAGGA
CAATGCAAATATCGCAGAGCAACCCAAACTAATGAGTGCTGCTTTGGTGAAAGCTGCTAAGCAGTTTGATGTATTGGTTGCAGCATTGCCTTTATCTGATGGGGGTGAAG
AAGAGCAGTTGAAAAGGATTGCAGAACTACAGGCTGAGAACGATGCTGTAGGTCAAGAACTTCAAAAGCAGCTAGAAGCAGCAGAGAAAGAATTAAAACAGGTTCAGGAG
CTTTTCAGCCAAGTTGCAGATAATTGCTTGAACTTGAAGAAAGCAGATTGA
Protein sequenceShow/hide protein sequence
MCCNCPRVSFARATATSSSDLHRSSILLLLLSLSLPRVTASASHHRRSSRRAAAAVRAIASSPSRRSAVVSLHVFFSTQATAVAAHLRDSLSLSFWFAWKPPPAASVLAV
AASTSQLSPPSSRRSAAATVSVAVFCAVSPSLLRFSALNLWILRPSSSKPQFRAISPLSSGVLASFWIVTASLNVSGAFLVYLELLKCFRSIRGIRFKMDIISQLQEQVN
TIAALAFNTFGTLQRDAPPVRLSPNYPEPPPHEPTEDNANIAEQPKLMSAALVKAAKQFDVLVAALPLSDGGEEEQLKRIAELQAENDAVGQELQKQLEAAEKELKQVQE
LFSQVADNCLNLKKAD