CuGenDBv2

Gene ID	Lag0032349
Organism	Luffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Description	origin of replication complex subunit 3
Genome location	chr11:31033706..31034384
RNA-Seq Expression	Lag0032349
Synteny	Lag0032349
Gene Ontology terms	GO:0006270 - DNA replication initiation (biological process) GO:0009744 - response to sucrose (biological process) GO:0048527 - lateral root development (biological process) GO:0005656 - nuclear pre-replicative complex (cellular component) GO:0005664 - nuclear origin of replication recognition complex (cellular component) GO:0031261 - DNA replication preinitiation complex (cellular component) GO:0003688 - DNA replication origin binding (molecular function) GO:0008270 - zinc ion binding (molecular function)
InterPro domains	IPR020795 - Origin recognition complex, subunit 3 IPR040855 - ORC3, winged helix C-terminal

Homology

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GenBank top hits

e value

%identity

Alignment

XP_022159468.1 origin of replication complex subunit 3 isoform X1 [Momordica charantia]

3.2e-41

91.4

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Query:  YNLAQEHGDLVNLHDWFQSFKTVVSHPHAKGNQKAKQCSTPKKRKDKPSLKNKSDASIQARFCTAVTELQITGLLRMPSKRRPDYVQRVAFGL
        YNLAQEHGDL+NLHDWFQSFKTVVSH HAK N + KQCSTPKKRKDKPSL+NKSDAS+QARFCTAVTELQITGLLRMPSKRRPDYVQRVAFGL
Subjt:  YNLAQEHGDLVNLHDWFQSFKTVVSHPHAKGNQKAKQCSTPKKRKDKPSLKNKSDASIQARFCTAVTELQITGLLRMPSKRRPDYVQRVAFGL

XP_022159470.1 origin of replication complex subunit 3 isoform X2 [Momordica charantia]

3.2e-41

91.4

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Query:  YNLAQEHGDLVNLHDWFQSFKTVVSHPHAKGNQKAKQCSTPKKRKDKPSLKNKSDASIQARFCTAVTELQITGLLRMPSKRRPDYVQRVAFGL
        YNLAQEHGDL+NLHDWFQSFKTVVSH HAK N + KQCSTPKKRKDKPSL+NKSDAS+QARFCTAVTELQITGLLRMPSKRRPDYVQRVAFGL
Subjt:  YNLAQEHGDLVNLHDWFQSFKTVVSHPHAKGNQKAKQCSTPKKRKDKPSLKNKSDASIQARFCTAVTELQITGLLRMPSKRRPDYVQRVAFGL

XP_022159471.1 origin of replication complex subunit 3 isoform X3 [Momordica charantia]

3.2e-41

91.4

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Query:  YNLAQEHGDLVNLHDWFQSFKTVVSHPHAKGNQKAKQCSTPKKRKDKPSLKNKSDASIQARFCTAVTELQITGLLRMPSKRRPDYVQRVAFGL
        YNLAQEHGDL+NLHDWFQSFKTVVSH HAK N + KQCSTPKKRKDKPSL+NKSDAS+QARFCTAVTELQITGLLRMPSKRRPDYVQRVAFGL
Subjt:  YNLAQEHGDLVNLHDWFQSFKTVVSHPHAKGNQKAKQCSTPKKRKDKPSLKNKSDASIQARFCTAVTELQITGLLRMPSKRRPDYVQRVAFGL

XP_023534344.1 origin of replication complex subunit 3 isoform X2 [Cucurbita pepo subsp. pepo]

2.3e-39

89.25

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Query:  YNLAQEHGDLVNLHDWFQSFKTVVSHPHAKGNQKAKQCSTPKKRKDKPSLKNKSDASIQARFCTAVTELQITGLLRMPSKRRPDYVQRVAFGL
        YNLAQEHGDL+NLHDWFQSFKTVVSHP  KGN + KQ STPKK+KDKP L+NKSDASIQARFCTAVTELQITGLLRMPSKRRPDYVQRVAFGL
Subjt:  YNLAQEHGDLVNLHDWFQSFKTVVSHPHAKGNQKAKQCSTPKKRKDKPSLKNKSDASIQARFCTAVTELQITGLLRMPSKRRPDYVQRVAFGL

XP_023534346.1 origin of replication complex subunit 3 isoform X3 [Cucurbita pepo subsp. pepo]

2.3e-39

89.25

Show/hide

Query:  YNLAQEHGDLVNLHDWFQSFKTVVSHPHAKGNQKAKQCSTPKKRKDKPSLKNKSDASIQARFCTAVTELQITGLLRMPSKRRPDYVQRVAFGL
        YNLAQEHGDL+NLHDWFQSFKTVVSHP  KGN + KQ STPKK+KDKP L+NKSDASIQARFCTAVTELQITGLLRMPSKRRPDYVQRVAFGL
Subjt:  YNLAQEHGDLVNLHDWFQSFKTVVSHPHAKGNQKAKQCSTPKKRKDKPSLKNKSDASIQARFCTAVTELQITGLLRMPSKRRPDYVQRVAFGL

TrEMBL top hits

e value

%identity

Alignment

A0A6J1DYU6 origin of replication complex subunit 3 isoform X2

1.5e-41

91.4

Show/hide

Query:  YNLAQEHGDLVNLHDWFQSFKTVVSHPHAKGNQKAKQCSTPKKRKDKPSLKNKSDASIQARFCTAVTELQITGLLRMPSKRRPDYVQRVAFGL
        YNLAQEHGDL+NLHDWFQSFKTVVSH HAK N + KQCSTPKKRKDKPSL+NKSDAS+QARFCTAVTELQITGLLRMPSKRRPDYVQRVAFGL
Subjt:  YNLAQEHGDLVNLHDWFQSFKTVVSHPHAKGNQKAKQCSTPKKRKDKPSLKNKSDASIQARFCTAVTELQITGLLRMPSKRRPDYVQRVAFGL

A0A6J1DYW4 origin of replication complex subunit 3 isoform X1

1.5e-41

91.4

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Query:  YNLAQEHGDLVNLHDWFQSFKTVVSHPHAKGNQKAKQCSTPKKRKDKPSLKNKSDASIQARFCTAVTELQITGLLRMPSKRRPDYVQRVAFGL
        YNLAQEHGDL+NLHDWFQSFKTVVSH HAK N + KQCSTPKKRKDKPSL+NKSDAS+QARFCTAVTELQITGLLRMPSKRRPDYVQRVAFGL
Subjt:  YNLAQEHGDLVNLHDWFQSFKTVVSHPHAKGNQKAKQCSTPKKRKDKPSLKNKSDASIQARFCTAVTELQITGLLRMPSKRRPDYVQRVAFGL

A0A6J1E410 origin of replication complex subunit 3 isoform X3

1.5e-41

91.4

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Query:  YNLAQEHGDLVNLHDWFQSFKTVVSHPHAKGNQKAKQCSTPKKRKDKPSLKNKSDASIQARFCTAVTELQITGLLRMPSKRRPDYVQRVAFGL
        YNLAQEHGDL+NLHDWFQSFKTVVSH HAK N + KQCSTPKKRKDKPSL+NKSDAS+QARFCTAVTELQITGLLRMPSKRRPDYVQRVAFGL
Subjt:  YNLAQEHGDLVNLHDWFQSFKTVVSHPHAKGNQKAKQCSTPKKRKDKPSLKNKSDASIQARFCTAVTELQITGLLRMPSKRRPDYVQRVAFGL

A0A6J1H3F7 origin of replication complex subunit 3 isoform X1

1.9e-39

89.25

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Query:  YNLAQEHGDLVNLHDWFQSFKTVVSHPHAKGNQKAKQCSTPKKRKDKPSLKNKSDASIQARFCTAVTELQITGLLRMPSKRRPDYVQRVAFGL
        YNLAQEHGDL+NLHDWFQSFKTVVSHP  KGN + KQ STPKK+KDKP L+NKSDASIQARFCTAVTELQITGLLRMPSKRRPDYVQRVAFGL
Subjt:  YNLAQEHGDLVNLHDWFQSFKTVVSHPHAKGNQKAKQCSTPKKRKDKPSLKNKSDASIQARFCTAVTELQITGLLRMPSKRRPDYVQRVAFGL

A0A6J1K0R6 origin of replication complex subunit 3 isoform X2

1.9e-39

89.25

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Query:  YNLAQEHGDLVNLHDWFQSFKTVVSHPHAKGNQKAKQCSTPKKRKDKPSLKNKSDASIQARFCTAVTELQITGLLRMPSKRRPDYVQRVAFGL
        YNLAQEHGDL+NLHDWFQSFKTVVSHP  KGN + KQ STPKK+KDKP L+NKSDASIQARFCTAVTELQITGLLRMPSKRRPDYVQRVAFGL
Subjt:  YNLAQEHGDLVNLHDWFQSFKTVVSHPHAKGNQKAKQCSTPKKRKDKPSLKNKSDASIQARFCTAVTELQITGLLRMPSKRRPDYVQRVAFGL

SwissProt top hits

e value

%identity

Alignment

Q0IY07 Origin of replication complex subunit 3

2.2e-24

63.04

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Query:  NLAQEHGDLVNLHDWFQSFKTVVSHPHAKGNQKAKQCSTPKKRKDKPSLKNKSDASIQARFCTAVTELQITGLLRMPSKRRPDYVQRVAFGL
        NLAQE+GD++NLHDW+ SF  +++  H+K   K K  ++P K+K KP +  +S+A IQARFC AVTELQITGLLRMPSKRRPD VQR+AFGL
Subjt:  NLAQEHGDLVNLHDWFQSFKTVVSHPHAKGNQKAKQCSTPKKRKDKPSLKNKSDASIQARFCTAVTELQITGLLRMPSKRRPDYVQRVAFGL

Q6E7H0 Origin of replication complex subunit 3

3.3e-25

61.46

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Query:  SCRYNLAQEHGDLVNLHDWFQSFKTVVSHPHAKGNQKAKQCSTPKKRKD-KPSLKNKSDASIQARFCTAVTELQITGLLRMPSKRRPDYVQRVAFG
        S  Y LAQEH D++NLHDW+QSFKT++    +K  QK+K  S  KKRK+     +  ++A IQARFC AV ELQITGL+RMPSKRRPD+VQRVAFG
Subjt:  SCRYNLAQEHGDLVNLHDWFQSFKTVVSHPHAKGNQKAKQCSTPKKRKD-KPSLKNKSDASIQARFCTAVTELQITGLLRMPSKRRPDYVQRVAFG

Arabidopsis top hits

e value

%identity

Alignment

AT5G16690.1 origin recognition complex subunit 3

2.4e-26

61.46

Show/hide

Query:  SCRYNLAQEHGDLVNLHDWFQSFKTVVSHPHAKGNQKAKQCSTPKKRKD-KPSLKNKSDASIQARFCTAVTELQITGLLRMPSKRRPDYVQRVAFG
        S  Y LAQEH D++NLHDW+QSFKT++    +K  QK+K  S  KKRK+     +  ++A IQARFC AV ELQITGL+RMPSKRRPD+VQRVAFG
Subjt:  SCRYNLAQEHGDLVNLHDWFQSFKTVVSHPHAKGNQKAKQCSTPKKRKD-KPSLKNKSDASIQARFCTAVTELQITGLLRMPSKRRPDYVQRVAFG

Sequences

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CDS sequence

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ATGGAACATTCATGTAGGTATAATTTAGCACAAGAGCATGGTGATCTCGTCAATCTCCATGATTGGTTCCAATCGTTCAAGACAGTTGTTAGTCATCCTCATGCTAAAGG
GAATCAAAAGGCGAAGCAATGCTCTACACCAAAGAAAAGGAAAGATAAACCTAGCCTTAAAAACAAAAGCGATGCATCAATTCAAGCAAGGTTTTGCACTGCTGTTACTG
AACTACAGATTACAGGGTTGCTTCGAATGCCAAGCAAAAGACGGCCTGATTATGTGCAGAGAGTGGCCTTCGGATTATAA

mRNA sequence

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Protein sequence

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MEHSCRYNLAQEHGDLVNLHDWFQSFKTVVSHPHAKGNQKAKQCSTPKKRKDKPSLKNKSDASIQARFCTAVTELQITGLLRMPSKRRPDYVQRVAFGL

Lag0032349 (gene) of Sponge gourd (AG-4) v1 genome