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Lag0032357 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0032357
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationchr11:31234962..31235753
RNA-Seq ExpressionLag0032357
SyntenyLag0032357
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
VVA37427.1 PREDICTED: reverse mRNAase, partial [Prunus dulcis]1.8e-1447.87Show/hide
Query:  MSLVNLLGIKLLDSLGYYLGMPS--QRRKHQVFWKLKEKIWNTLQDWKDHLFSMGGKETLIEPIAQAISSYTMSYFKLPKAICEKINKHYAKFW
        + L   +GI  +D    YLG+P    ++K   F  LKE++W  LQ WK  L S  GKE LI+ +AQAI  YTMSYF LPK +CE +NK  A+FW
Subjt:  MSLVNLLGIKLLDSLGYYLGMPS--QRRKHQVFWKLKEKIWNTLQDWKDHLFSMGGKETLIEPIAQAISSYTMSYFKLPKAICEKINKHYAKFW

XP_012087680.1 uncharacterized protein LOC105646435 [Jatropha curcas]8.2e-1546.74Show/hide
Query:  LVNLLGIKLLDSLGYYLGMPSQ--RRKHQVFWKLKEKIWNTLQDWKDHLFSMGGKETLIEPIAQAISSYTMSYFKLPKAICEKINKHYAKFW
        + N LG++  DSLG YLG+PS   R+K +VF  LK++IW  +  WKD + S  GKE L++ + QA+ SY MS F LPK +C +I     KFW
Subjt:  LVNLLGIKLLDSLGYYLGMPSQ--RRKHQVFWKLKEKIWNTLQDWKDHLFSMGGKETLIEPIAQAISSYTMSYFKLPKAICEKINKHYAKFW

XP_022145148.1 uncharacterized protein LOC111014662 [Momordica charantia]2.8e-1548.86Show/hide
Query:  LGIKLLDSLGYYLGMPSQ--RRKHQVFWKLKEKIWNTLQDWKDHLFSMGGKETLIEPIAQAISSYTMSYFKLPKAICEKINKHYAKFW
        L +   + +G YLG+PSQ  R K QVF  +  ++W  LQ WK+ LFS GGKE LI+ +AQAI +Y+MS F+ P  +C++IN  YA+FW
Subjt:  LGIKLLDSLGYYLGMPSQ--RRKHQVFWKLKEKIWNTLQDWKDHLFSMGGKETLIEPIAQAISSYTMSYFKLPKAICEKINKHYAKFW

XP_030505362.1 uncharacterized protein LOC115720349 [Cannabis sativa]4.1e-1446.74Show/hide
Query:  LVNLLGIKLLDSLGYYLGMPS--QRRKHQVFWKLKEKIWNTLQDWKDHLFSMGGKETLIEPIAQAISSYTMSYFKLPKAICEKINKHYAKFW
        L N LG+ L+     YLG+PS   RRK +VF  +K+K+WN L+ WK  +FS  GKE LI+ + QAI SY+MS F+LPK +   ++   A FW
Subjt:  LVNLLGIKLLDSLGYYLGMPS--QRRKHQVFWKLKEKIWNTLQDWKDHLFSMGGKETLIEPIAQAISSYTMSYFKLPKAICEKINKHYAKFW

XP_034218997.1 uncharacterized protein LOC117630370 [Prunus dulcis]1.8e-1447.87Show/hide
Query:  MSLVNLLGIKLLDSLGYYLGMPS--QRRKHQVFWKLKEKIWNTLQDWKDHLFSMGGKETLIEPIAQAISSYTMSYFKLPKAICEKINKHYAKFW
        + L   +GI  +D    YLG+P    ++K   F  LKE++W  LQ WK  L S  GKE LI+ +AQAI  YTMSYF LPK +CE +NK  A+FW
Subjt:  MSLVNLLGIKLLDSLGYYLGMPS--QRRKHQVFWKLKEKIWNTLQDWKDHLFSMGGKETLIEPIAQAISSYTMSYFKLPKAICEKINKHYAKFW

TrEMBL top hitse value%identityAlignment
A0A6J1CV63 uncharacterized protein LOC1110146621.4e-1548.86Show/hide
Query:  LGIKLLDSLGYYLGMPSQ--RRKHQVFWKLKEKIWNTLQDWKDHLFSMGGKETLIEPIAQAISSYTMSYFKLPKAICEKINKHYAKFW
        L +   + +G YLG+PSQ  R K QVF  +  ++W  LQ WK+ LFS GGKE LI+ +AQAI +Y+MS F+ P  +C++IN  YA+FW
Subjt:  LGIKLLDSLGYYLGMPSQ--RRKHQVFWKLKEKIWNTLQDWKDHLFSMGGKETLIEPIAQAISSYTMSYFKLPKAICEKINKHYAKFW

A0A803PTL9 Uncharacterized protein1.0e-1548.91Show/hide
Query:  LVNLLGIKLLDSLGYYLGMPS--QRRKHQVFWKLKEKIWNTLQDWKDHLFSMGGKETLIEPIAQAISSYTMSYFKLPKAICEKINKHYAKFW
        L   LG++L+     YLG+PS   RRK + F  +KEK+WN LQ WK ++FS  GKE LI+ + QAI SYTMS F+LPK + + ++   AKFW
Subjt:  LVNLLGIKLLDSLGYYLGMPS--QRRKHQVFWKLKEKIWNTLQDWKDHLFSMGGKETLIEPIAQAISSYTMSYFKLPKAICEKINKHYAKFW

A0A803PWX1 Uncharacterized protein2.3e-1547.83Show/hide
Query:  LVNLLGIKLLDSLGYYLGMPS--QRRKHQVFWKLKEKIWNTLQDWKDHLFSMGGKETLIEPIAQAISSYTMSYFKLPKAICEKINKHYAKFW
        L N++G+K++D+ G YLG+PS   R K Q F  +K K+WN L+ WK   FS  GKE LI+ + QAI +YTMS F+LPK     I+   A+FW
Subjt:  LVNLLGIKLLDSLGYYLGMPS--QRRKHQVFWKLKEKIWNTLQDWKDHLFSMGGKETLIEPIAQAISSYTMSYFKLPKAICEKINKHYAKFW

A0A803QCP7 Uncharacterized protein1.0e-1548.91Show/hide
Query:  LVNLLGIKLLDSLGYYLGMPS--QRRKHQVFWKLKEKIWNTLQDWKDHLFSMGGKETLIEPIAQAISSYTMSYFKLPKAICEKINKHYAKFW
        L N LG++L+ +   YLG+PS   RRK +VF  +K+K+WN L+ WK  +FS  G+E LI+ I QAI SYTMS F+LPK + +K++   A FW
Subjt:  LVNLLGIKLLDSLGYYLGMPS--QRRKHQVFWKLKEKIWNTLQDWKDHLFSMGGKETLIEPIAQAISSYTMSYFKLPKAICEKINKHYAKFW

A0A803QJV0 Uncharacterized protein2.7e-1646.81Show/hide
Query:  MSLVNLLGIKLLDSLGYYLGMPS--QRRKHQVFWKLKEKIWNTLQDWKDHLFSMGGKETLIEPIAQAISSYTMSYFKLPKAICEKINKHYAKFW
        + L   LG+K++D+ G YLG+ S   R K QVF  +K ++WN+L+ WK H+FSMGG E LI+ I QAI +YTMS+++L K+    I++  A+FW
Subjt:  MSLVNLLGIKLLDSLGYYLGMPS--QRRKHQVFWKLKEKIWNTLQDWKDHLFSMGGKETLIEPIAQAISSYTMSYFKLPKAICEKINKHYAKFW

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGCTTAGTAAATCTCCTTGGCATTAAGCTTCTTGATTCTTTGGGATACTATCTGGGTATGCCCTCTCAAAGGAGAAAGCACCAAGTGTTCTGGAAGTTGAAAGAAAA
AATCTGGAATACCCTTCAGGACTGGAAAGATCACCTATTTTCGATGGGAGGGAAGGAGACATTGATCGAACCCATTGCCCAAGCCATCTCATCCTATACCATGAGCTATT
TCAAGCTCCCCAAGGCCATTTGCGAGAAGATCAATAAGCATTATGCTAAATTCTGGGAGGTGGGAGAAGCTTGCGGGATCAATCAGGGAAAAGGATTTGCCTACTGCAAT
CAGGCTAATTTGGAGCACATGGAACCACAGGAATGA
mRNA sequenceShow/hide mRNA sequence
ATGAGCTTAGTAAATCTCCTTGGCATTAAGCTTCTTGATTCTTTGGGATACTATCTGGGTATGCCCTCTCAAAGGAGAAAGCACCAAGTGTTCTGGAAGTTGAAAGAAAA
AATCTGGAATACCCTTCAGGACTGGAAAGATCACCTATTTTCGATGGGAGGGAAGGAGACATTGATCGAACCCATTGCCCAAGCCATCTCATCCTATACCATGAGCTATT
TCAAGCTCCCCAAGGCCATTTGCGAGAAGATCAATAAGCATTATGCTAAATTCTGGGAGGTGGGAGAAGCTTGCGGGATCAATCAGGGAAAAGGATTTGCCTACTGCAAT
CAGGCTAATTTGGAGCACATGGAACCACAGGAATGA
Protein sequenceShow/hide protein sequence
MSLVNLLGIKLLDSLGYYLGMPSQRRKHQVFWKLKEKIWNTLQDWKDHLFSMGGKETLIEPIAQAISSYTMSYFKLPKAICEKINKHYAKFWEVGEACGINQGKGFAYCN
QANLEHMEPQE