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Lag0032380 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0032380
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRibonuclease H
Genome locationchr11:31633018..31634350
RNA-Seq ExpressionLag0032380
SyntenyLag0032380
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022150028.1 uncharacterized protein LOC111018300 [Momordica charantia]5.2e-2944.32Show/hide
Query:  PKEIQFTEKGVAGIHHPHNDVLVVTLTIANARVHRILVDGGSFVDVISLVALEATKLGRSRPKPSLISLVGFGGEKVSPEGSIKLLVTFGEGQQSITKMI
        P +I+F+E     + HPHNDVLV+TL IANA+VHRILVDGGS  D+ISL A +A  LG    K S  SLV F GE+V PEG  +L VTFG G +SIT ++
Subjt:  PKEIQFTEKGVAGIHHPHNDVLVVTLTIANARVHRILVDGGSFVDVISLVALEATKLGRSRPKPSLISLVGFGGEKVSPEGSIKLLVTFGEGQQSITKMI

Query:  NFLI-----------------------------LKFPTEKGVGMVHDEQKTSRECYFTSLKNTERKPRIAPCSGDH
        +FL+                             + FPT  G+G + +EQ+ SRECY+TS+K  +R    A  +G H
Subjt:  NFLI-----------------------------LKFPTEKGVGMVHDEQKTSRECYFTSLKNTERKPRIAPCSGDH

XP_022150858.1 uncharacterized protein LOC111018902 [Momordica charantia]2.3e-2941.15Show/hide
Query:  KGYHDQNKAEVAMTPLSRSEPSY-------EGPPKEIQFTEKGVAGIHHPHNDVLVVTLTIANARVHRILVDGGSFVDVISLVALEATKLGRSRPKPSLI
        +GY  +   +   T   R   +Y       E  P +I+F E  V  I HPHND LV+ L IANA+VH ILVDGGS  D+ISL A +   LG    K S  
Subjt:  KGYHDQNKAEVAMTPLSRSEPSY-------EGPPKEIQFTEKGVAGIHHPHNDVLVVTLTIANARVHRILVDGGSFVDVISLVALEATKLGRSRPKPSLI

Query:  SLVGFGGEKVSPEGSIKLLVTFGEGQQSITKMINFLI-----------------------------LKFPTEKGVGMVHDEQKTSRECYFTSLKNTERKP
         LVGFGGE V PEG I+L VTFG G +SITKM++FL+                             +KFPT  G+G +  EQ+ SRECY+ S+K  ++  
Subjt:  SLVGFGGEKVSPEGSIKLLVTFGEGQQSITKMINFLI-----------------------------LKFPTEKGVGMVHDEQKTSRECYFTSLKNTERKP

Query:  RIAPCSGDH
          A  +GDH
Subjt:  RIAPCSGDH

XP_022155186.1 uncharacterized protein LOC111022321 [Momordica charantia]9.8e-2844.38Show/hide
Query:  IQFTEKGVAGIHHPHNDVLVVTLTIANARVHRILVDGGSFVDVISLVALEATKLGRSRPKPSLISLVGFGGEKVSPEGSIKLLVTFGEGQQSITKMINFL
        I+F+E     + HPHND LV+TL IAN +VHRILVDGGS  D+IS  A +A  LG    K S   LVGFGGE+V  EG I+L VTFG G +S+TKM++FL
Subjt:  IQFTEKGVAGIHHPHNDVLVVTLTIANARVHRILVDGGSFVDVISLVALEATKLGRSRPKPSLISLVGFGGEKVSPEGSIKLLVTFGEGQQSITKMINFL

Query:  IL-----------------------------KFPTEKGVGMVHDEQKTSRECYFTSLKNTERKPRIAPC
        ++                             KFPT  GVG +  EQ+ SRECY TS+++ +R      C
Subjt:  IL-----------------------------KFPTEKGVGMVHDEQKTSRECYFTSLKNTERKPRIAPC

XP_022155873.1 uncharacterized protein LOC111022886 [Momordica charantia]8.9e-2941.4Show/hide
Query:  QNKAEVAMTPLSRSEPSYEGPPKEIQFTEKGVAGIHHPHNDVLVVTLTIANARVHRILVDGGSFVDVISLVALEATKLGRSRPKPSLISLVGFGGEKVSP
        QN    + +P+       E  P +++F+E     + HPHND LV+TL IANA+VHRILVDGGS   +ISL A +A  LG    K S + LVGFGGE+V P
Subjt:  QNKAEVAMTPLSRSEPSYEGPPKEIQFTEKGVAGIHHPHNDVLVVTLTIANARVHRILVDGGSFVDVISLVALEATKLGRSRPKPSLISLVGFGGEKVSP

Query:  EGSIKLLVTFGEGQQSITKMINFLI-----------------------------LKFPTEKGVGMVHDEQKTSRECYFTSLKNTER
        EG I+L V FG G +SI KM++FL+                             +KFPT  G+G +  EQ+  RECY  S+K  +R
Subjt:  EGSIKLLVTFGEGQQSITKMINFLI-----------------------------LKFPTEKGVGMVHDEQKTSRECYFTSLKNTER

XP_022158943.1 uncharacterized protein LOC111025398 [Momordica charantia]2.6e-2845.88Show/hide
Query:  GPPKEIQFTEKGVAGIHHPHNDVLVVTLTIANARVHRILVDGGSFVDVISLVALEATKLGRSRPKPSLISLVGFGGEKVSPEGSIKLLVTFGEGQQSITK
        GPP +++F++     + HPHN VLV +L IAN +VHRIL DGGS  D+ISL A +A  LG    K     L+GFGGE+V PEG I+LLVTFG G +SI K
Subjt:  GPPKEIQFTEKGVAGIHHPHNDVLVVTLTIANARVHRILVDGGSFVDVISLVALEATKLGRSRPKPSLISLVGFGGEKVSPEGSIKLLVTFGEGQQSITK

Query:  MINFLI-----------------------------LKFPTEKGVGMVHDEQKTSRECYFTSLKNT--ERK
        MI FL+                             LKFPT  G+G +  EQ  SRECY+TSL+ +  ERK
Subjt:  MINFLI-----------------------------LKFPTEKGVGMVHDEQKTSRECYFTSLKNT--ERK

TrEMBL top hitse value%identityAlignment
A0A6J1D8C9 uncharacterized protein LOC1110183002.5e-2944.32Show/hide
Query:  PKEIQFTEKGVAGIHHPHNDVLVVTLTIANARVHRILVDGGSFVDVISLVALEATKLGRSRPKPSLISLVGFGGEKVSPEGSIKLLVTFGEGQQSITKMI
        P +I+F+E     + HPHNDVLV+TL IANA+VHRILVDGGS  D+ISL A +A  LG    K S  SLV F GE+V PEG  +L VTFG G +SIT ++
Subjt:  PKEIQFTEKGVAGIHHPHNDVLVVTLTIANARVHRILVDGGSFVDVISLVALEATKLGRSRPKPSLISLVGFGGEKVSPEGSIKLLVTFGEGQQSITKMI

Query:  NFLI-----------------------------LKFPTEKGVGMVHDEQKTSRECYFTSLKNTERKPRIAPCSGDH
        +FL+                             + FPT  G+G + +EQ+ SRECY+TS+K  +R    A  +G H
Subjt:  NFLI-----------------------------LKFPTEKGVGMVHDEQKTSRECYFTSLKNTERKPRIAPCSGDH

A0A6J1DAK4 uncharacterized protein LOC1110189021.1e-2941.15Show/hide
Query:  KGYHDQNKAEVAMTPLSRSEPSY-------EGPPKEIQFTEKGVAGIHHPHNDVLVVTLTIANARVHRILVDGGSFVDVISLVALEATKLGRSRPKPSLI
        +GY  +   +   T   R   +Y       E  P +I+F E  V  I HPHND LV+ L IANA+VH ILVDGGS  D+ISL A +   LG    K S  
Subjt:  KGYHDQNKAEVAMTPLSRSEPSY-------EGPPKEIQFTEKGVAGIHHPHNDVLVVTLTIANARVHRILVDGGSFVDVISLVALEATKLGRSRPKPSLI

Query:  SLVGFGGEKVSPEGSIKLLVTFGEGQQSITKMINFLI-----------------------------LKFPTEKGVGMVHDEQKTSRECYFTSLKNTERKP
         LVGFGGE V PEG I+L VTFG G +SITKM++FL+                             +KFPT  G+G +  EQ+ SRECY+ S+K  ++  
Subjt:  SLVGFGGEKVSPEGSIKLLVTFGEGQQSITKMINFLI-----------------------------LKFPTEKGVGMVHDEQKTSRECYFTSLKNTERKP

Query:  RIAPCSGDH
          A  +GDH
Subjt:  RIAPCSGDH

A0A6J1DP33 uncharacterized protein LOC1110228864.3e-2941.4Show/hide
Query:  QNKAEVAMTPLSRSEPSYEGPPKEIQFTEKGVAGIHHPHNDVLVVTLTIANARVHRILVDGGSFVDVISLVALEATKLGRSRPKPSLISLVGFGGEKVSP
        QN    + +P+       E  P +++F+E     + HPHND LV+TL IANA+VHRILVDGGS   +ISL A +A  LG    K S + LVGFGGE+V P
Subjt:  QNKAEVAMTPLSRSEPSYEGPPKEIQFTEKGVAGIHHPHNDVLVVTLTIANARVHRILVDGGSFVDVISLVALEATKLGRSRPKPSLISLVGFGGEKVSP

Query:  EGSIKLLVTFGEGQQSITKMINFLI-----------------------------LKFPTEKGVGMVHDEQKTSRECYFTSLKNTER
        EG I+L V FG G +SI KM++FL+                             +KFPT  G+G +  EQ+  RECY  S+K  +R
Subjt:  EGSIKLLVTFGEGQQSITKMINFLI-----------------------------LKFPTEKGVGMVHDEQKTSRECYFTSLKNTER

A0A6J1DQY2 uncharacterized protein LOC1110223214.8e-2844.38Show/hide
Query:  IQFTEKGVAGIHHPHNDVLVVTLTIANARVHRILVDGGSFVDVISLVALEATKLGRSRPKPSLISLVGFGGEKVSPEGSIKLLVTFGEGQQSITKMINFL
        I+F+E     + HPHND LV+TL IAN +VHRILVDGGS  D+IS  A +A  LG    K S   LVGFGGE+V  EG I+L VTFG G +S+TKM++FL
Subjt:  IQFTEKGVAGIHHPHNDVLVVTLTIANARVHRILVDGGSFVDVISLVALEATKLGRSRPKPSLISLVGFGGEKVSPEGSIKLLVTFGEGQQSITKMINFL

Query:  IL-----------------------------KFPTEKGVGMVHDEQKTSRECYFTSLKNTERKPRIAPC
        ++                             KFPT  GVG +  EQ+ SRECY TS+++ +R      C
Subjt:  IL-----------------------------KFPTEKGVGMVHDEQKTSRECYFTSLKNTERKPRIAPC

A0A6J1DXH0 uncharacterized protein LOC1110253981.3e-2845.88Show/hide
Query:  GPPKEIQFTEKGVAGIHHPHNDVLVVTLTIANARVHRILVDGGSFVDVISLVALEATKLGRSRPKPSLISLVGFGGEKVSPEGSIKLLVTFGEGQQSITK
        GPP +++F++     + HPHN VLV +L IAN +VHRIL DGGS  D+ISL A +A  LG    K     L+GFGGE+V PEG I+LLVTFG G +SI K
Subjt:  GPPKEIQFTEKGVAGIHHPHNDVLVVTLTIANARVHRILVDGGSFVDVISLVALEATKLGRSRPKPSLISLVGFGGEKVSPEGSIKLLVTFGEGQQSITK

Query:  MINFLI-----------------------------LKFPTEKGVGMVHDEQKTSRECYFTSLKNT--ERK
        MI FL+                             LKFPT  G+G +  EQ  SRECY+TSL+ +  ERK
Subjt:  MINFLI-----------------------------LKFPTEKGVGMVHDEQKTSRECYFTSLKNT--ERK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCACGATTGCATCAGCGTAGATCATTCAAACCAACAATTTCAGATTATCAAGGTCGACGCAATGTGCGTCGGCATAGACCTTCTACGCCGACACACGATGTGTGCGTC
GACGTACACCTCTATGCCGACGCGTCTACACCGACGTCCGTGCCGACACAATCTTCGCGTCGGAGAGTTGTCTACGCCGACGCTAGGGGGGTCTACGTCGACGCAACGAT
GCGTCAGCGTAGACCGAAAATCTTGTACTGAGCACTCCTCAAGTCGAGGCCGAGCAGAGGCAAAGGAGGCTCAGAATCGAGGAGAACCAAAGGGAAAGTTTGAAAAATAT
ACCCCACTGTCCACCCTTCTCAAACAGGCAAAAGGTTATCACGATCAGAACAAGGCTGAGGTGGCGATGACCCCCCTCTCGAGATCCGAACCATCTTATGAGGGCCCGCC
GAAGGAGATTCAGTTCACAGAAAAAGGGGTTGCAGGAATTCATCATCCACACAATGATGTGTTGGTAGTAACCCTAACTATTGCCAACGCGAGGGTTCACCGAATCCTAG
TCGATGGAGGGAGCTTCGTCGATGTCATCTCCTTAGTAGCACTCGAGGCTACGAAGTTAGGGAGGAGTCGTCCGAAACCGAGCCTCATATCGTTGGTTGGATTCGGGGGA
GAAAAAGTGAGTCCAGAGGGAAGCATCAAGCTACTAGTAACTTTCGGAGAAGGGCAACAGTCGATTACGAAGATGATCAACTTCTTGATCTTGAAATTTCCAACAGAAAA
GGGTGTAGGAATGGTGCACGACGAGCAGAAAACGTCTAGGGAATGTTACTTCACATCGCTCAAGAACACTGAAAGGAAGCCCAGAATAGCTCCCTGCTCGGGCGATCACC
GAGGTCGAGGCCGAGCATCCCCTAGCACGAAGAATTCAGAGACTCCTCTCTCAATGGAGTACTAG
mRNA sequenceShow/hide mRNA sequence
ATGCACGATTGCATCAGCGTAGATCATTCAAACCAACAATTTCAGATTATCAAGGTCGACGCAATGTGCGTCGGCATAGACCTTCTACGCCGACACACGATGTGTGCGTC
GACGTACACCTCTATGCCGACGCGTCTACACCGACGTCCGTGCCGACACAATCTTCGCGTCGGAGAGTTGTCTACGCCGACGCTAGGGGGGTCTACGTCGACGCAACGAT
GCGTCAGCGTAGACCGAAAATCTTGTACTGAGCACTCCTCAAGTCGAGGCCGAGCAGAGGCAAAGGAGGCTCAGAATCGAGGAGAACCAAAGGGAAAGTTTGAAAAATAT
ACCCCACTGTCCACCCTTCTCAAACAGGCAAAAGGTTATCACGATCAGAACAAGGCTGAGGTGGCGATGACCCCCCTCTCGAGATCCGAACCATCTTATGAGGGCCCGCC
GAAGGAGATTCAGTTCACAGAAAAAGGGGTTGCAGGAATTCATCATCCACACAATGATGTGTTGGTAGTAACCCTAACTATTGCCAACGCGAGGGTTCACCGAATCCTAG
TCGATGGAGGGAGCTTCGTCGATGTCATCTCCTTAGTAGCACTCGAGGCTACGAAGTTAGGGAGGAGTCGTCCGAAACCGAGCCTCATATCGTTGGTTGGATTCGGGGGA
GAAAAAGTGAGTCCAGAGGGAAGCATCAAGCTACTAGTAACTTTCGGAGAAGGGCAACAGTCGATTACGAAGATGATCAACTTCTTGATCTTGAAATTTCCAACAGAAAA
GGGTGTAGGAATGGTGCACGACGAGCAGAAAACGTCTAGGGAATGTTACTTCACATCGCTCAAGAACACTGAAAGGAAGCCCAGAATAGCTCCCTGCTCGGGCGATCACC
GAGGTCGAGGCCGAGCATCCCCTAGCACGAAGAATTCAGAGACTCCTCTCTCAATGGAGTACTAG
Protein sequenceShow/hide protein sequence
MHDCISVDHSNQQFQIIKVDAMCVGIDLLRRHTMCASTYTSMPTRLHRRPCRHNLRVGELSTPTLGGSTSTQRCVSVDRKSCTEHSSSRGRAEAKEAQNRGEPKGKFEKY
TPLSTLLKQAKGYHDQNKAEVAMTPLSRSEPSYEGPPKEIQFTEKGVAGIHHPHNDVLVVTLTIANARVHRILVDGGSFVDVISLVALEATKLGRSRPKPSLISLVGFGG
EKVSPEGSIKLLVTFGEGQQSITKMINFLILKFPTEKGVGMVHDEQKTSRECYFTSLKNTERKPRIAPCSGDHRGRGRASPSTKNSETPLSMEY