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Lag0032388 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0032388
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionCCHC-type domain-containing protein
Genome locationchr11:31791493..31792374
RNA-Seq ExpressionLag0032388
SyntenyLag0032388
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR001878 - Zinc finger, CCHC-type
IPR025558 - Domain of unknown function DUF4283
IPR025836 - Zinc knuckle CX2CX4HX4C
IPR040256 - Uncharacterized protein At4g02000-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TXG57156.1 hypothetical protein EZV62_018469 [Acer yangbiense]3.7e-2933.89Show/hide
Query:  MMPKIWNQ-EHTSIVNVGFNMFLCKFKNARIKGWILETGPWFYDKALRLFEEPKGGIHSEDMEFMYVSLWTHFHKLPYACFSRASAKTIGSLLGKVEKVD
        ++ ++W+Q     I +VG N+F+ KF N   +  I + GPW++DK+L +    +G  +   + F  V +W   + +P  C +R  AK +   +G+V  +D
Subjt:  MMPKIWNQ-EHTSIVNVGFNMFLCKFKNARIKGWILETGPWFYDKALRLFEEPKGGIHSEDMEFMYVSLWTHFHKLPYACFSRASAKTIGSLLGKVEKVD

Query:  IPDEDDPLWGKSLRIKIQLDVNMPLKRGIFFKSGSNGEDKWIAVTYEKLPNFCYGCGCLGHIIKECEEQIGSSNKELLYG
        IP E    WGK L++K+Q+D+  PLK+ ++ +   + E   +++ YE+LP FCY CG +GH  KECE++   + +E L G
Subjt:  IPDEDDPLWGKSLRIKIQLDVNMPLKRGIFFKSGSNGEDKWIAVTYEKLPNFCYGCGCLGHIIKECEEQIGSSNKELLYG

XP_015382889.1 uncharacterized protein LOC102626150 [Citrus sinensis]3.4e-3037.5Show/hide
Query:  MPKIW-NQEHTSIVNVGFNMFLCKFKNARIKGWILETGPWFYDKALRLFEEPKGGIHSEDMEFMYVSLWTHFHKLPYACFSRASAKTIGSLLGKVEKVDI
        M ++W       I  +G N+F+ KF +   K  IL  GPW +D+AL +  EP G    +   F  VSLW   H +P  C S+  A  +G+++GKVE+VD 
Subjt:  MPKIW-NQEHTSIVNVGFNMFLCKFKNARIKGWILETGPWFYDKALRLFEEPKGGIHSEDMEFMYVSLWTHFHKLPYACFSRASAKTIGSLLGKVEKVDI

Query:  PDEDDPLWGKSLRIKIQLDVNMPLKRGIFFKSG-SNGEDKWIAVTYEKLPNFCYGCGCLGHIIKECEEQIGSSNKELLYGPWLYEPT---KLKM------
         D  + L G  LR++I +D++ PLK+ I  +    + ED  + V YE+LP+FC+ CG +GH  +EC   I  S  EL YGPWL   T   KL+       
Subjt:  PDEDDPLWGKSLRIKIQLDVNMPLKRGIFFKSG-SNGEDKWIAVTYEKLPNFCYGCGCLGHIIKECEEQIGSSNKELLYGPWLYEPT---KLKM------

Query:  ---DEGGPSTRNSHGRGRGRGWNG
           D GG  TR S       G NG
Subjt:  ---DEGGPSTRNSHGRGRGRGWNG

XP_022132681.1 uncharacterized protein LOC111005481 [Momordica charantia]5.7e-3038.95Show/hide
Query:  SIVNVGFNMFLCKFKNARIKGWILETGPWFYDKALRLFEEPKGGIHSEDMEFMYVSLWTHFHKLPYACFSRASAKTIGSLLGKVEKVDIPDEDDPLWGKS
        S+  +GFN+FL  F  +  +  IL  GPW +D+AL + + P       DM+F  VSLW HF  L  AC ++  A  +G+ +G  E V+  + ++  WG  
Subjt:  SIVNVGFNMFLCKFKNARIKGWILETGPWFYDKALRLFEEPKGGIHSEDMEFMYVSLWTHFHKLPYACFSRASAKTIGSLLGKVEKVDIPDEDDPLWGKS

Query:  LRIKIQLDVNMPLKRGIFFKSGSNGEDKWIAVTYEKLPNFCYGCGCLGHIIKECEE-QIGSSNKELLYGPWL
        LR++++ DV  PL RGI           WI + YE+LP+F Y CG L HI+K+C +  + S +K L YGPWL
Subjt:  LRIKIQLDVNMPLKRGIFFKSGSNGEDKWIAVTYEKLPNFCYGCGCLGHIIKECEE-QIGSSNKELLYGPWL

XP_022149484.1 uncharacterized protein LOC111017902 [Momordica charantia]2.0e-3035.62Show/hide
Query:  MMPKIWN-QEHTSIVNVGFNMFLCKFKNARIKGWILETGPWFYDKALRLFEEPKGGIHSEDMEFMYVSLWTHFHKLPYACFSRASAKTIGSLLGKVEKVD
        +M  +W     T    +G N+++  FK+   K  +L +GPW ++K+L +   P       DM F + + W   H +P+ C S   A  +G+ LG VE+++
Subjt:  MMPKIWN-QEHTSIVNVGFNMFLCKFKNARIKGWILETGPWFYDKALRLFEEPKGGIHSEDMEFMYVSLWTHFHKLPYACFSRASAKTIGSLLGKVEKVD

Query:  IPDEDDPLWGKSLRIKIQLDVNMPLKRGIFFKSGSNGEDKWIAVTYEKLPNFCYGCGCLGHIIKECEE--QIGSSNKELLYGPWLYEPTKLKMDEGGPST
          D  D   G  +R+++++DV+ PL+RGI  K+ S+G+D W  + YEKLP+FCY CG +GH  +ECE+  ++ ++N    YG WL   T LK     P  
Subjt:  IPDEDDPLWGKSLRIKIQLDVNMPLKRGIFFKSGSNGEDKWIAVTYEKLPNFCYGCGCLGHIIKECEE--QIGSSNKELLYGPWLYEPTKLKMDEGGPST

Query:  RN--SHGR-GRGRGWNGGR
              GR GRG   NGGR
Subjt:  RN--SHGR-GRGRGWNGGR

XP_024033132.1 uncharacterized protein LOC112095437 [Citrus clementina]7.5e-3034.62Show/hide
Query:  MPKIWNQEHT-SIVNVGFNMFLCKFKNARIKGWILETGPWFYDKALRLFEEPKGGIHSEDMEFMYVSLWTHFHKLPYACFSRASAKTIGSLLGKVEKVDI
        + + W   H   + ++G N+F+ KF +   K  +   GPW +D+AL + +EPKG    +   F +VS W   H +P  C   +  + +GS +GKVE + +
Subjt:  MPKIWNQEHT-SIVNVGFNMFLCKFKNARIKGWILETGPWFYDKALRLFEEPKGGIHSEDMEFMYVSLWTHFHKLPYACFSRASAKTIGSLLGKVEKVDI

Query:  PDEDDPLWGKSLRIKIQLDVNMPLKRGIFFKSGSNGEDKWIAVTYEKLPNFCYGCGCLGHIIKECEEQIGSSNKELLYGPWL
         D     +G+ +RI++ +++  PLK+ I  K   + ED  + V YE+LP+FC+ CGC+GH  +EC E  G   + L +GPWL
Subjt:  PDEDDPLWGKSLRIKIQLDVNMPLKRGIFFKSGSNGEDKWIAVTYEKLPNFCYGCGCLGHIIKECEEQIGSSNKELLYGPWL

TrEMBL top hitse value%identityAlignment
A0A2N9F1J2 Phorbol-ester/DAG-type domain-containing protein5.2e-2939.13Show/hide
Query:  IWNQEHT-SIVNVGFNMFLCKFKNARIKGWILETGPWFYDKALRLFEEPKGGIHSEDMEFMYVSLWTHFHKLPYACFSRASAKTIGSLLGKVEKVDIPDE
        +W  + + S+ ++G N     F++A     +L   PW +DK L +FE     I  +D+ F YVS W   H LP    +  SA  IG  LG+VEKV   D+
Subjt:  IWNQEHT-SIVNVGFNMFLCKFKNARIKGWILETGPWFYDKALRLFEEPKGGIHSEDMEFMYVSLWTHFHKLPYACFSRASAKTIGSLLGKVEKVDIPDE

Query:  DDPLWGKS-LRIKIQLDVNMPLKRGIFFKSGSNGEDKWIAVTYEKLPNFCYGCGCLGHIIKECEEQIGSSNKE----LLYGPWL
        DD   G++ LR++++LDV  PL RG   K    G+  W+A  YE+LPNFCY CGCL H  K+C+E +   + E      YG WL
Subjt:  DDPLWGKS-LRIKIQLDVNMPLKRGIFFKSGSNGEDKWIAVTYEKLPNFCYGCGCLGHIIKECEEQIGSSNKE----LLYGPWL

A0A5C7H9Y2 CCHC-type domain-containing protein1.2e-2830.77Show/hide
Query:  IW-NQEHTSIVNVGFNMFLCKFKNARIKGWILETGPWFYDKALRLFEEPKGGIHSEDMEFMYVSLWTHFHKLPYACFSRASAKTIGSLLGKVEKVDIPDE
        IW  +   ++  +G N+F  +F+N   +  ILE GPW +DK L +  E  G     D++F YV  W   H LP AC +R     +G L+G+V+++D  + 
Subjt:  IW-NQEHTSIVNVGFNMFLCKFKNARIKGWILETGPWFYDKALRLFEEPKGGIHSEDMEFMYVSLWTHFHKLPYACFSRASAKTIGSLLGKVEKVDIPDE

Query:  DDPLWGKSLRIKIQLDVNMPLKRGIFFKSGSNGEDKWIAVTYEKLPNFCYGCGCLGHIIKEC---EEQIGSSNKELLYGPWLYEPTKLKMDEGGPSTRNS
         + + G+ +RI++ +DV  PLKRG+    G + +   + + YE+LPNFCY CG +GH++++C    ++I SS+    +GPW+   ++ +    G    + 
Subjt:  DDPLWGKSLRIKIQLDVNMPLKRGIFFKSGSNGEDKWIAVTYEKLPNFCYGCGCLGHIIKEC---EEQIGSSNKELLYGPWLYEPTKLKMDEGGPSTRNS

Query:  HGRGRGRGWN-------GGRRRW--GKDIS----DGEEVEVSDAELKSSEPPPTAELHPSPTKEAEKEKVMVGSVDMESMKILETS
         G   G   +        G  +W  GKD S    DGE++++   ELKS     T +   S T    K++++  +      KI E S
Subjt:  HGRGRGRGWN-------GGRRRW--GKDIS----DGEEVEVSDAELKSSEPPPTAELHPSPTKEAEKEKVMVGSVDMESMKILETS

A0A5C7HLK8 CCHC-type domain-containing protein1.8e-2933.89Show/hide
Query:  MMPKIWNQ-EHTSIVNVGFNMFLCKFKNARIKGWILETGPWFYDKALRLFEEPKGGIHSEDMEFMYVSLWTHFHKLPYACFSRASAKTIGSLLGKVEKVD
        ++ ++W+Q     I +VG N+F+ KF N   +  I + GPW++DK+L +    +G  +   + F  V +W   + +P  C +R  AK +   +G+V  +D
Subjt:  MMPKIWNQ-EHTSIVNVGFNMFLCKFKNARIKGWILETGPWFYDKALRLFEEPKGGIHSEDMEFMYVSLWTHFHKLPYACFSRASAKTIGSLLGKVEKVD

Query:  IPDEDDPLWGKSLRIKIQLDVNMPLKRGIFFKSGSNGEDKWIAVTYEKLPNFCYGCGCLGHIIKECEEQIGSSNKELLYG
        IP E    WGK L++K+Q+D+  PLK+ ++ +   + E   +++ YE+LP FCY CG +GH  KECE++   + +E L G
Subjt:  IPDEDDPLWGKSLRIKIQLDVNMPLKRGIFFKSGSNGEDKWIAVTYEKLPNFCYGCGCLGHIIKECEEQIGSSNKELLYG

A0A6J1BSZ1 uncharacterized protein LOC1110054812.8e-3038.95Show/hide
Query:  SIVNVGFNMFLCKFKNARIKGWILETGPWFYDKALRLFEEPKGGIHSEDMEFMYVSLWTHFHKLPYACFSRASAKTIGSLLGKVEKVDIPDEDDPLWGKS
        S+  +GFN+FL  F  +  +  IL  GPW +D+AL + + P       DM+F  VSLW HF  L  AC ++  A  +G+ +G  E V+  + ++  WG  
Subjt:  SIVNVGFNMFLCKFKNARIKGWILETGPWFYDKALRLFEEPKGGIHSEDMEFMYVSLWTHFHKLPYACFSRASAKTIGSLLGKVEKVDIPDEDDPLWGKS

Query:  LRIKIQLDVNMPLKRGIFFKSGSNGEDKWIAVTYEKLPNFCYGCGCLGHIIKECEE-QIGSSNKELLYGPWL
        LR++++ DV  PL RGI           WI + YE+LP+F Y CG L HI+K+C +  + S +K L YGPWL
Subjt:  LRIKIQLDVNMPLKRGIFFKSGSNGEDKWIAVTYEKLPNFCYGCGCLGHIIKECEE-QIGSSNKELLYGPWL

A0A6J1D765 uncharacterized protein LOC1110179029.5e-3135.62Show/hide
Query:  MMPKIWN-QEHTSIVNVGFNMFLCKFKNARIKGWILETGPWFYDKALRLFEEPKGGIHSEDMEFMYVSLWTHFHKLPYACFSRASAKTIGSLLGKVEKVD
        +M  +W     T    +G N+++  FK+   K  +L +GPW ++K+L +   P       DM F + + W   H +P+ C S   A  +G+ LG VE+++
Subjt:  MMPKIWN-QEHTSIVNVGFNMFLCKFKNARIKGWILETGPWFYDKALRLFEEPKGGIHSEDMEFMYVSLWTHFHKLPYACFSRASAKTIGSLLGKVEKVD

Query:  IPDEDDPLWGKSLRIKIQLDVNMPLKRGIFFKSGSNGEDKWIAVTYEKLPNFCYGCGCLGHIIKECEE--QIGSSNKELLYGPWLYEPTKLKMDEGGPST
          D  D   G  +R+++++DV+ PL+RGI  K+ S+G+D W  + YEKLP+FCY CG +GH  +ECE+  ++ ++N    YG WL   T LK     P  
Subjt:  IPDEDDPLWGKSLRIKIQLDVNMPLKRGIFFKSGSNGEDKWIAVTYEKLPNFCYGCGCLGHIIKECEE--QIGSSNKELLYGPWLYEPTKLKMDEGGPST

Query:  RN--SHGR-GRGRGWNGGR
              GR GRG   NGGR
Subjt:  RN--SHGR-GRGRGWNGGR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATGCCCAAGATATGGAACCAAGAACACACAAGCATTGTCAACGTGGGTTTCAACATGTTCCTATGCAAATTCAAGAATGCTCGAATAAAAGGATGGATTTTGGAGAC
GGGTCCATGGTTCTATGATAAAGCGTTGCGGTTGTTTGAGGAACCGAAAGGAGGCATTCATAGCGAGGACATGGAGTTTATGTATGTTTCTCTTTGGACTCATTTTCATA
AGCTGCCTTACGCTTGTTTTTCCAGGGCATCGGCGAAAACAATAGGCAGCTTGCTTGGAAAGGTGGAAAAAGTGGATATTCCAGATGAAGATGATCCGTTGTGGGGGAAA
TCGCTCAGGATCAAAATACAGCTTGATGTTAACATGCCGCTGAAACGAGGAATTTTCTTTAAGTCAGGCAGTAATGGAGAAGACAAGTGGATAGCAGTTACATATGAGAA
GCTACCGAATTTCTGTTATGGGTGTGGTTGCTTGGGCCATATTATCAAAGAATGTGAAGAACAGATAGGCTCAAGCAACAAGGAGTTATTATATGGCCCATGGCTTTATG
AACCTACAAAACTAAAAATGGATGAAGGCGGACCTTCTACGAGAAATTCACATGGAAGAGGTAGGGGAAGGGGCTGGAATGGAGGAAGAAGGAGATGGGGAAAAGATATC
TCAGATGGGGAGGAGGTGGAGGTATCAGATGCTGAATTGAAATCATCAGAGCCACCACCTACGGCAGAGCTCCACCCCTCTCCGACAAAGGAAGCTGAAAAGGAAAAGGT
AATGGTCGGAAGTGTAGATATGGAAAGTATGAAAATTTTGGAAACTTCAGCAATGGAAGATTACGAAAATAAAAGGAAATTAAATGAGAAGACTGAGGAAGGCAAGAATT
AA
mRNA sequenceShow/hide mRNA sequence
ATGATGCCCAAGATATGGAACCAAGAACACACAAGCATTGTCAACGTGGGTTTCAACATGTTCCTATGCAAATTCAAGAATGCTCGAATAAAAGGATGGATTTTGGAGAC
GGGTCCATGGTTCTATGATAAAGCGTTGCGGTTGTTTGAGGAACCGAAAGGAGGCATTCATAGCGAGGACATGGAGTTTATGTATGTTTCTCTTTGGACTCATTTTCATA
AGCTGCCTTACGCTTGTTTTTCCAGGGCATCGGCGAAAACAATAGGCAGCTTGCTTGGAAAGGTGGAAAAAGTGGATATTCCAGATGAAGATGATCCGTTGTGGGGGAAA
TCGCTCAGGATCAAAATACAGCTTGATGTTAACATGCCGCTGAAACGAGGAATTTTCTTTAAGTCAGGCAGTAATGGAGAAGACAAGTGGATAGCAGTTACATATGAGAA
GCTACCGAATTTCTGTTATGGGTGTGGTTGCTTGGGCCATATTATCAAAGAATGTGAAGAACAGATAGGCTCAAGCAACAAGGAGTTATTATATGGCCCATGGCTTTATG
AACCTACAAAACTAAAAATGGATGAAGGCGGACCTTCTACGAGAAATTCACATGGAAGAGGTAGGGGAAGGGGCTGGAATGGAGGAAGAAGGAGATGGGGAAAAGATATC
TCAGATGGGGAGGAGGTGGAGGTATCAGATGCTGAATTGAAATCATCAGAGCCACCACCTACGGCAGAGCTCCACCCCTCTCCGACAAAGGAAGCTGAAAAGGAAAAGGT
AATGGTCGGAAGTGTAGATATGGAAAGTATGAAAATTTTGGAAACTTCAGCAATGGAAGATTACGAAAATAAAAGGAAATTAAATGAGAAGACTGAGGAAGGCAAGAATT
AA
Protein sequenceShow/hide protein sequence
MMPKIWNQEHTSIVNVGFNMFLCKFKNARIKGWILETGPWFYDKALRLFEEPKGGIHSEDMEFMYVSLWTHFHKLPYACFSRASAKTIGSLLGKVEKVDIPDEDDPLWGK
SLRIKIQLDVNMPLKRGIFFKSGSNGEDKWIAVTYEKLPNFCYGCGCLGHIIKECEEQIGSSNKELLYGPWLYEPTKLKMDEGGPSTRNSHGRGRGRGWNGGRRRWGKDI
SDGEEVEVSDAELKSSEPPPTAELHPSPTKEAEKEKVMVGSVDMESMKILETSAMEDYENKRKLNEKTEEGKN