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Lag0032391 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0032391
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRibonuclease H protein
Genome locationchr11:31796013..31796336
RNA-Seq ExpressionLag0032391
SyntenyLag0032391
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsIPR002156 - Ribonuclease H domain
IPR012337 - Ribonuclease H-like superfamily
IPR036397 - Ribonuclease H superfamily
IPR044730 - Ribonuclease H-like domain, plant type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022143535.1 uncharacterized protein LOC111013412 [Momordica charantia]1.0e-0834.74Show/hide
Query:  WKLQCDASWSEQRQQGGIGWLIRNWNGTLLFAGFRSIRRPWKISWMEAAAVCEGLKWIPENSPR-VEVNLDALQIVRLLNNEESNETELYSFIEE
        WKL  +A+W      GGIGW++R+  G ++ A  R IR    I+++E  A+CEGL+ I +   R + +  D+L+ + LL+ +  ++TE+   +EE
Subjt:  WKLQCDASWSEQRQQGGIGWLIRNWNGTLLFAGFRSIRRPWKISWMEAAAVCEGLKWIPENSPR-VEVNLDALQIVRLLNNEESNETELYSFIEE
XP_022154990.1 uncharacterized protein LOC111022134 isoform X1 [Momordica charantia]1.5e-0733.7Show/hide
Query:  WKLQCDASWSEQRQQGGIGWLIRNWNGTLLFAGFRSIRRPWKISWMEAAAVCEGLKWIPENSPR-VEVNLDALQIVRLLNNEESNETELYSF
        WKL  DA+W       GIGW++R+  G ++  G R IR    I+++E  A+CEGL+ I +   R + +  D+L+ + LL+     + +L+ F
Subjt:  WKLQCDASWSEQRQQGGIGWLIRNWNGTLLFAGFRSIRRPWKISWMEAAAVCEGLKWIPENSPR-VEVNLDALQIVRLLNNEESNETELYSF
XP_022154991.1 uncharacterized protein LOC111022134 isoform X2 [Momordica charantia]1.5e-0733.7Show/hide
Query:  WKLQCDASWSEQRQQGGIGWLIRNWNGTLLFAGFRSIRRPWKISWMEAAAVCEGLKWIPENSPR-VEVNLDALQIVRLLNNEESNETELYSF
        WKL  DA+W       GIGW++R+  G ++  G R IR    I+++E  A+CEGL+ I +   R + +  D+L+ + LL+     + +L+ F
Subjt:  WKLQCDASWSEQRQQGGIGWLIRNWNGTLLFAGFRSIRRPWKISWMEAAAVCEGLKWIPENSPR-VEVNLDALQIVRLLNNEESNETELYSF
XP_022155262.1 uncharacterized protein LOC111022403 [Momordica charantia]1.7e-0833.33Show/hide
Query:  MGMWKLQCDASWSEQRQQGGIGWLIRNWNGTLLFAGFRSIRRPWKISWMEAAAVCEGLKWIPENS--PRVEVNLDALQIVRLLNNEESNETELYSFIEE
        M +W L  DASWS+   +GGIGW+IR+W+G ++ AG R +     +  +EA+A+ EGL+ +        + +  D+ ++  LLN +  + T+    +EE
Subjt:  MGMWKLQCDASWSEQRQQGGIGWLIRNWNGTLLFAGFRSIRRPWKISWMEAAAVCEGLKWIPENS--PRVEVNLDALQIVRLLNNEESNETELYSFIEE
XP_022156777.1 uncharacterized protein LOC111023608 [Momordica charantia]2.9e-0833.01Show/hide
Query:  WKLQCDASWSEQRQQGGIGWLIRNWNGTLLFAGFRSIRRPWKISWMEAAAVCEGLKWIPENSPR---------VEVNLDALQIVRLLNNEESNETELYSF
        WKL  DA+W      GGIGW++R+  G ++ A  R IR    I+++E  A+CEGL+ I +   R         + +  D+L+ + LL+ +  ++TE+   
Subjt:  WKLQCDASWSEQRQQGGIGWLIRNWNGTLLFAGFRSIRRPWKISWMEAAAVCEGLKWIPENSPR---------VEVNLDALQIVRLLNNEESNETELYSF

Query:  IEE
        +EE
Subjt:  IEE
TrEMBL top hitse value%identityAlignment
A0A6J1CP26 uncharacterized protein LOC1110134124.9e-0934.74Show/hide
Query:  WKLQCDASWSEQRQQGGIGWLIRNWNGTLLFAGFRSIRRPWKISWMEAAAVCEGLKWIPENSPR-VEVNLDALQIVRLLNNEESNETELYSFIEE
        WKL  +A+W      GGIGW++R+  G ++ A  R IR    I+++E  A+CEGL+ I +   R + +  D+L+ + LL+ +  ++TE+   +EE
Subjt:  WKLQCDASWSEQRQQGGIGWLIRNWNGTLLFAGFRSIRRPWKISWMEAAAVCEGLKWIPENSPR-VEVNLDALQIVRLLNNEESNETELYSFIEE
A0A6J1DL64 uncharacterized protein LOC111022134 isoform X17.1e-0833.7Show/hide
Query:  WKLQCDASWSEQRQQGGIGWLIRNWNGTLLFAGFRSIRRPWKISWMEAAAVCEGLKWIPENSPR-VEVNLDALQIVRLLNNEESNETELYSF
        WKL  DA+W       GIGW++R+  G ++  G R IR    I+++E  A+CEGL+ I +   R + +  D+L+ + LL+     + +L+ F
Subjt:  WKLQCDASWSEQRQQGGIGWLIRNWNGTLLFAGFRSIRRPWKISWMEAAAVCEGLKWIPENSPR-VEVNLDALQIVRLLNNEESNETELYSF
A0A6J1DNV9 uncharacterized protein LOC1110224038.4e-0933.33Show/hide
Query:  MGMWKLQCDASWSEQRQQGGIGWLIRNWNGTLLFAGFRSIRRPWKISWMEAAAVCEGLKWIPENS--PRVEVNLDALQIVRLLNNEESNETELYSFIEE
        M +W L  DASWS+   +GGIGW+IR+W+G ++ AG R +     +  +EA+A+ EGL+ +        + +  D+ ++  LLN +  + T+    +EE
Subjt:  MGMWKLQCDASWSEQRQQGGIGWLIRNWNGTLLFAGFRSIRRPWKISWMEAAAVCEGLKWIPENS--PRVEVNLDALQIVRLLNNEESNETELYSFIEE
A0A6J1DQC9 uncharacterized protein LOC111022134 isoform X27.1e-0833.7Show/hide
Query:  WKLQCDASWSEQRQQGGIGWLIRNWNGTLLFAGFRSIRRPWKISWMEAAAVCEGLKWIPENSPR-VEVNLDALQIVRLLNNEESNETELYSF
        WKL  DA+W       GIGW++R+  G ++  G R IR    I+++E  A+CEGL+ I +   R + +  D+L+ + LL+     + +L+ F
Subjt:  WKLQCDASWSEQRQQGGIGWLIRNWNGTLLFAGFRSIRRPWKISWMEAAAVCEGLKWIPENSPR-VEVNLDALQIVRLLNNEESNETELYSF
A0A6J1DSV1 uncharacterized protein LOC1110236081.4e-0833.01Show/hide
Query:  WKLQCDASWSEQRQQGGIGWLIRNWNGTLLFAGFRSIRRPWKISWMEAAAVCEGLKWIPENSPR---------VEVNLDALQIVRLLNNEESNETELYSF
        WKL  DA+W      GGIGW++R+  G ++ A  R IR    I+++E  A+CEGL+ I +   R         + +  D+L+ + LL+ +  ++TE+   
Subjt:  WKLQCDASWSEQRQQGGIGWLIRNWNGTLLFAGFRSIRRPWKISWMEAAAVCEGLKWIPENSPR---------VEVNLDALQIVRLLNNEESNETELYSF

Query:  IEE
        +EE
Subjt:  IEE
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G34320.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein1.1e-0531.4Show/hide
Query:  KLQCDASWSEQRQQGGIGWLIRNWNGTLLFAGFRSIRRPWKISWMEAAAVCEGLKWI-----PENSPRVEVNLDALQIVRLLNNEE
        K   DA+W  +  + GIGW++RN +G +L+ G R++ R   +      A  E L+W        N  R+    DA  +V LLN+++
Subjt:  KLQCDASWSEQRQQGGIGWLIRNWNGTLLFAGFRSIRRPWKISWMEAAAVCEGLKWI-----PENSPRVEVNLDALQIVRLLNNEE
AT4G29090.1 Ribonuclease H-like superfamily protein3.2e-0530.23Show/hide
Query:  KLQCDASWSEQRQQGGIGWLIRNWNGTLLFAGFRSIRRPWKISWMEAAAVCEGLKWIPENSPRVEVNL-----DALQIVRLLNNEE
        K   DA+W+   ++ GIGW++RN  G + + G R++  P   S +EA    E ++W   +  R + N      D+  ++ +LNN+E
Subjt:  KLQCDASWSEQRQQGGIGWLIRNWNGTLLFAGFRSIRRPWKISWMEAAAVCEGLKWIPENSPRVEVNL-----DALQIVRLLNNEE

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTATGTGGAAACTTCAGTGCGACGCCTCTTGGAGCGAGCAACGACAGCAAGGAGGAATCGGGTGGCTAATCAGAAATTGGAATGGCACTCTTCTGTTCGCGGGTTT
TCGATCCATTAGGCGACCTTGGAAGATAAGTTGGATGGAAGCAGCTGCGGTCTGTGAAGGATTGAAATGGATTCCAGAAAATTCTCCTCGTGTAGAAGTCAATTTGGACG
CCCTTCAAATTGTTCGGCTTCTCAATAATGAGGAATCAAATGAAACGGAACTCTACAGCTTCATCGAAGAAGCCAAAGCGTTGATAGCAAGAAGAAATATTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGTATGTGGAAACTTCAGTGCGACGCCTCTTGGAGCGAGCAACGACAGCAAGGAGGAATCGGGTGGCTAATCAGAAATTGGAATGGCACTCTTCTGTTCGCGGGTTT
TCGATCCATTAGGCGACCTTGGAAGATAAGTTGGATGGAAGCAGCTGCGGTCTGTGAAGGATTGAAATGGATTCCAGAAAATTCTCCTCGTGTAGAAGTCAATTTGGACG
CCCTTCAAATTGTTCGGCTTCTCAATAATGAGGAATCAAATGAAACGGAACTCTACAGCTTCATCGAAGAAGCCAAAGCGTTGATAGCAAGAAGAAATATTTGA
Protein sequenceShow/hide protein sequence
MGMWKLQCDASWSEQRQQGGIGWLIRNWNGTLLFAGFRSIRRPWKISWMEAAAVCEGLKWIPENSPRVEVNLDALQIVRLLNNEESNETELYSFIEEAKALIARRNI