; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0032395 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0032395
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRNase H domain-containing protein
Genome locationchr11:31869417..31870829
RNA-Seq ExpressionLag0032395
SyntenyLag0032395
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsIPR002156 - Ribonuclease H domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF5452039.1 hypothetical protein F2P56_027079 [Juglans regia]3.1e-0632.29Show/hide
Query:  MWLKRGLCMKGSEWLFGYSGLHVESDSLRLVRILRGELEDISEVGAIVDSILRLVVVDSLFRVSFVPREGNRVAHMLAKLVCDCISDYVWVEEWPN
        +W    LCM       G++ +  E D+  +V+ +  E ED+S  G I++ I  ++   + + V F+ R+GN VAH+LAK V     D +W++E P+
Subjt:  MWLKRGLCMKGSEWLFGYSGLHVESDSLRLVRILRGELEDISEVGAIVDSILRLVVVDSLFRVSFVPREGNRVAHMLAKLVCDCISDYVWVEEWPN

PRQ16761.1 putative ribonuclease H-like domain-containing protein [Rosa chinensis]9.1e-0640Show/hide
Query:  LHVESDSLRLVRILRGELEDISEVGAIVDSILRLVVVDSLFRVSFVPREGNRVAHMLAKLVCDCISDYVWVEEWP
        L VE+D L  VR++    E ++EVG +V+ +  L++V    R+ FVPRE N+VAH +AK V   +  + W E  P
Subjt:  LHVESDSLRLVRILRGELEDISEVGAIVDSILRLVVVDSLFRVSFVPREGNRVAHMLAKLVCDCISDYVWVEEWP

XP_021728488.1 uncharacterized protein LOC110695581 [Chenopodium quinoa]5.3e-0640.74Show/hide
Query:  GYSGLHVESDSLRLVRILRGELEDISEVGAIVDSILRLVVVDSLFRVSFVPREGNRVAHMLAKLVCDCISDYVWVEEWPNE
        G+  + +E+D+L+L   LR    D +  G I+  IL L     +   +FV REGN+V H LAKL C+  S  VW+EE+P+E
Subjt:  GYSGLHVESDSLRLVRILRGELEDISEVGAIVDSILRLVVVDSLFRVSFVPREGNRVAHMLAKLVCDCISDYVWVEEWPNE

XP_022150944.1 uncharacterized protein LOC111018973 [Momordica charantia]5.3e-0639.76Show/hide
Query:  GYSGLHVESDSLRLVRILRGELEDISEVGAIVDSILRLVVVDSLFRV--SFVPREGNRVAHMLAKLVCDCISDYVWVEEWPNE
        G+    +E+DSLR+  +L  +  D SEVG ++ S+++L +     RV  SF  R GN  AH+LA+L        +WVEEWP+E
Subjt:  GYSGLHVESDSLRLVRILRGELEDISEVGAIVDSILRLVVVDSLFRV--SFVPREGNRVAHMLAKLVCDCISDYVWVEEWPNE

XP_023871998.1 uncharacterized protein LOC111984613 [Quercus suber]1.1e-0643.37Show/hide
Query:  WLFGYSGLHVESDSLRLVRILRGELEDISEVGAIVDSILRLVVVDSLFRVSFVPREGNRVAHMLAKLVCDCISDYVWVEEWPN
        W  G+  +  E+DSL L R L G  E  S +  I+ SIL LV   S F  S V R+GNR AH+LA+         VW+EE PN
Subjt:  WLFGYSGLHVESDSLRLVRILRGELEDISEVGAIVDSILRLVVVDSLFRVSFVPREGNRVAHMLAKLVCDCISDYVWVEEWPN

TrEMBL top hitse value%identityAlignment
A0A2P6P4A4 Putative ribonuclease H-like domain-containing protein4.4e-0640Show/hide
Query:  LHVESDSLRLVRILRGELEDISEVGAIVDSILRLVVVDSLFRVSFVPREGNRVAHMLAKLVCDCISDYVWVEEWP
        L VE+D L  VR++    E ++EVG +V+ +  L++V    R+ FVPRE N+VAH +AK V   +  + W E  P
Subjt:  LHVESDSLRLVRILRGELEDISEVGAIVDSILRLVVVDSLFRVSFVPREGNRVAHMLAKLVCDCISDYVWVEEWP

A0A396J6M3 Putative ribonuclease H-like domain-containing protein1.3e-0538.75Show/hide
Query:  GYSGLHVESDSLRLVRILRGELEDISEVGAIVDSILRLVVVDSLFRVSFVPREGNRVAHMLAKLVCDCISDYVWVEEWPN
        G+  + VE DSL +V+ L+    D S  G +++    L  + S F VS V R GN +AH LAK   D  +D+VW++E P+
Subjt:  GYSGLHVESDSLRLVRILRGELEDISEVGAIVDSILRLVVVDSLFRVSFVPREGNRVAHMLAKLVCDCISDYVWVEEWPN

A0A5C7ITL2 RNase H domain-containing protein1.7e-0536.99Show/hide
Query:  VESDSLRLVRILRGELEDISEVGAIVDSILRLVVVDSLFRVSFVPREGNRVAHMLAKLVCDCISDYVWVEEWP
        +ESD+L +V  +R +   +SEVG ++  IL +     +F + FVPR  N+V H LA+L    +  +VWV + P
Subjt:  VESDSLRLVRILRGELEDISEVGAIVDSILRLVVVDSLFRVSFVPREGNRVAHMLAKLVCDCISDYVWVEEWP

A0A6P9DSU8 uncharacterized protein LOC1183438021.3e-0531.58Show/hide
Query:  MWLKRGLCMKGSEWLFGYSGLHVESDSLRLVRILRGELEDISEVGAIVDSILRLVVVDSLFRVSFVPREGNRVAHMLAKLVCDCISDYVWVEEWP
        MW    LC +   W      + +E D+  ++  +  + ED S  G +V+ + + +     ++V F  R+GN VAH LAK+   CISD  W++E P
Subjt:  MWLKRGLCMKGSEWLFGYSGLHVESDSLRLVRILRGELEDISEVGAIVDSILRLVVVDSLFRVSFVPREGNRVAHMLAKLVCDCISDYVWVEEWP

F4NCI7 Reverse transcriptase domain-containing protein9.8e-0632.91Show/hide
Query:  GYSGLHVESDSLRLVRILRGELEDISEVGAIVDSILRLVVVDSLFRVSFVPREGNRVAHMLAKLVCDCISDYVWVEEWP
        G+  + +E D++ ++  ++ + E ++ +  I + I  L     +F VS V R GN VAH+LA+  CDC S+ VW++ +P
Subjt:  GYSGLHVESDSLRLVRILRGELEDISEVGAIVDSILRLVVVDSLFRVSFVPREGNRVAHMLAKLVCDCISDYVWVEEWP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGGCTGAAGCGAGGGCTATGTATGAAGGGGTCTGAATGGTTGTTCGGTTATTCTGGTCTCCATGTTGAGTCTGACTCGTTGCGTTTGGTTCGTATCCTTCGAGGTGA
ATTGGAAGATATTTCAGAGGTTGGTGCGATTGTGGATTCTATTCTCCGCTTGGTAGTTGTTGATTCTTTGTTTCGAGTTTCCTTTGTTCCGAGAGAGGGTAATCGTGTTG
CTCATATGTTAGCTAAGTTAGTTTGTGATTGTATTTCAGATTATGTGTGGGTTGAGGAGTGGCCAAATGAGGGGGGAAGGCGTGGCCTGCAAGACGGAAAACCTGCACAC
CGGTGTGGTGCTAGCCACACCGACTCTGATACTTAA
mRNA sequenceShow/hide mRNA sequence
ATGTGGCTGAAGCGAGGGCTATGTATGAAGGGGTCTGAATGGTTGTTCGGTTATTCTGGTCTCCATGTTGAGTCTGACTCGTTGCGTTTGGTTCGTATCCTTCGAGGTGA
ATTGGAAGATATTTCAGAGGTTGGTGCGATTGTGGATTCTATTCTCCGCTTGGTAGTTGTTGATTCTTTGTTTCGAGTTTCCTTTGTTCCGAGAGAGGGTAATCGTGTTG
CTCATATGTTAGCTAAGTTAGTTTGTGATTGTATTTCAGATTATGTGTGGGTTGAGGAGTGGCCAAATGAGGGGGGAAGGCGTGGCCTGCAAGACGGAAAACCTGCACAC
CGGTGTGGTGCTAGCCACACCGACTCTGATACTTAA
Protein sequenceShow/hide protein sequence
MWLKRGLCMKGSEWLFGYSGLHVESDSLRLVRILRGELEDISEVGAIVDSILRLVVVDSLFRVSFVPREGNRVAHMLAKLVCDCISDYVWVEEWPNEGGRRGLQDGKPAH
RCGASHTDSDT