; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0032436 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0032436
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRibonuclease H-like domain containing protein
Genome locationchr11:32528870..32529507
RNA-Seq ExpressionLag0032436
SyntenyLag0032436
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF8762282.1 hypothetical protein HU200_009635 [Digitaria exilis]4.8e-0930.81Show/hide
Query:  NSNRRGMDLFVGRPSRVVCRWAPPEFDGLKVNVDMTFCLESGTTGVGVVCSDSWGQVGFAAAVFHENIRDADFAEGWVATVGLRLAVE------------
        + NR G D   G+ S+   RW PP     KVNVD +F +++G  G+GVV  D+ G V F A     +   A  AE     +G+RLA +            
Subjt:  NSNRRGMDLFVGRPSRVVCRWAPPEFDGLKVNVDMTFCLESGTTGVGVVCSDSWGQVGFAAAVFHENIRDADFAEGWVATVGLRLAVE------------

Query:  ------TRDVEEISELGLLVKDAVR--GVPAGWFVGGSLTFREGNRVAHRLARLAMEDRCDRVWMEEGPPCV
               +  ++ SELG + ++      +   W +      RE N VA  LA+LA   +  +VW+E  P CV
Subjt:  ------TRDVEEISELGLLVKDAVR--GVPAGWFVGGSLTFREGNRVAHRLARLAMEDRCDRVWMEEGPPCV

XP_021839114.1 uncharacterized protein LOC110778879 [Spinacia oleracea]4.8e-0930.52Show/hide
Query:  SRVVCRWAPPEFDGLKVNVDMTFCLESGTTGVGVVCSDSWGQVGFAAAVFHENIRDADFAEGWVATVGLRLAVET--RDV-----------------EEI
        +R   +W PP    LKVN D    L+ G  G+G+V  D  G+V FA++         +  E   A V +++A E   +D+                 +  
Subjt:  SRVVCRWAPPEFDGLKVNVDMTFCLESGTTGVGVVCSDSWGQVGFAAAVFHENIRDADFAEGWVATVGLRLAVET--RDV-----------------EEI

Query:  SELGLLVKDAVRGVPAGWFVGGSLTFREGNRVAHRLARLAMEDRCDRVWMEEGP
        S + L+V+DA   +P+   +  S  FRE + VAHRLA+ A+ +  D VW++ GP
Subjt:  SELGLLVKDAVRGVPAGWFVGGSLTFREGNRVAHRLARLAMEDRCDRVWMEEGP

XP_022140628.1 uncharacterized protein LOC111011237 [Momordica charantia]6.7e-1128.5Show/hide
Query:  MDWVVGYLNSLHNSNRRGMDLFVGRPSRVVCRWAPPEFDGLKVNVDMTFCLESGTTGVGVVCSDSWGQVGFAAAVFHENIRDADFAEGWVATVGLRLAVE
        ++W   Y+     +N       V   + V+  W PP+    K+N D +F       G+G++  +  GQV  +A  + ENI+  D AE  VA  GL+LA +
Subjt:  MDWVVGYLNSLHNSNRRGMDLFVGRPSRVVCRWAPPEFDGLKVNVDMTFCLESGTTGVGVVCSDSWGQVGFAAAVFHENIRDADFAEGWVATVGLRLAVE

Query:  -------------------TRDVEEISELGLLVKDAVRGVPAGWFVGGSLTFREGNRVAHRLARLAMEDRCDRVWMEEGPPCVCACWLRTECM
                           ++  E++SE G +V  A            +   REGN+ AH LAR A+  R   +WME+ P  + +C L  EC+
Subjt:  -------------------TRDVEEISELGLLVKDAVRGVPAGWFVGGSLTFREGNRVAHRLARLAMEDRCDRVWMEEGPPCVCACWLRTECM

XP_022150918.1 uncharacterized protein LOC111018954 [Momordica charantia]3.9e-1134.48Show/hide
Query:  WAPPEFDGLKVNVDMTFCLESGTTGVGVVCSDSWGQVGFAAAVFHENIRDADFAEGWVATVGLRLAVET---RDVEEISELGLLVKDAVRGVPAGWFVGG
        W PP+    K+N D +F       G+G++  +  GQV  AA  + ENI+  D AE   A  GL+LA E      +E++SE G +V  A            
Subjt:  WAPPEFDGLKVNVDMTFCLESGTTGVGVVCSDSWGQVGFAAAVFHENIRDADFAEGWVATVGLRLAVET---RDVEEISELGLLVKDAVRGVPAGWFVGG

Query:  SLTFREGNRVAHRLARLAMEDRCDRVWMEEGPPCVCACWLRTECM
        +   REGN+ AH LAR A+      +WME+ P  + +C L  EC+
Subjt:  SLTFREGNRVAHRLARLAMEDRCDRVWMEEGPPCVCACWLRTECM

XP_022150944.1 uncharacterized protein LOC111018973 [Momordica charantia]6.1e-1232.83Show/hide
Query:  MDWVVGYLNSLHNSNRRGMD-LFVGRPSRVVCRWAPPEFDGLKVNVDMTFCLESGTTGVGVVCSDSWGQVGFAAAVFHENIRDADFAEGWVATVGLRLAV
        + W   YL     + R     L V RP RV   W PP    LKVNVD  F  ES   GVGV+  DS G V   A        D D+ EG+    G+ LAV
Subjt:  MDWVVGYLNSLHNSNRRGMD-LFVGRPSRVVCRWAPPEFDGLKVNVDMTFCLESGTTGVGVVCSDSWGQVGFAAAVFHENIRDADFAEGWVATVGLRLAV

Query:  ETR------DVEEISELGLLVKDAVRGVPAGWF--------------VGGSLTFREGNRVAHRLARLAMEDRCDRVWMEEGPPCVCACWLRTECMSFS
        E        + + +    LL  D V     G                V  S T R GN  AH LA+LA+     ++W+EE P  + +  L  +C S S
Subjt:  ETR------DVEEISELGLLVKDAVRGVPAGWF--------------VGGSLTFREGNRVAHRLARLAMEDRCDRVWMEEGPPCVCACWLRTECMSFS

TrEMBL top hitse value%identityAlignment
A0A2P6S796 Putative ribonuclease H-like domain-containing protein1.2e-0831.18Show/hide
Query:  RWAPPEFDGLKVNVDMTFCLESGTTGVGVVCSDSWGQVGFAAA-----------------------VFHENIRDADFAEGWVATVGLRLAVETRDVEEIS
        RW  P    LK+NVD  F +++G  G+G V  D  G+   A A                       V H+ + + D  E   ATVG  L     D E++S
Subjt:  RWAPPEFDGLKVNVDMTFCLESGTTGVGVVCSDSWGQVGFAAA-----------------------VFHENIRDADFAEGWVATVGLRLAVETRDVEEIS

Query:  ELGLLVKDA---VRGVPAGWFVGGSLTFREGNRVAHRLARLAMEDRCDRVWMEEGPPCVCACWLRTECMS
        E+G +++D    +R +P+   V     +RE N VAHRLA LA     D  W+EE P  +        C S
Subjt:  ELGLLVKDA---VRGVPAGWFVGGSLTFREGNRVAHRLARLAMEDRCDRVWMEEGPPCVCACWLRTECMS

A0A2P6SAP1 Putative RNA-directed DNA polymerase4.0e-0930.13Show/hide
Query:  RPSRVVCRWAPPEFDGLKVNVDMTFCLESGTTGVGVVCSDSWGQVGFAAAVFHENIRDADFAEGWVATVGLRLAVE-------------------TRDVE
        +  R   +W  P    LK+N+D ++  ESG  G+GVV  D  G    A A +  N+  A   E      GL LA+                     +++E
Subjt:  RPSRVVCRWAPPEFDGLKVNVDMTFCLESGTTGVGVVCSDSWGQVGFAAAVFHENIRDADFAEGWVATVGLRLAVE-------------------TRDVE

Query:  EISELGLLVKDAVRGVPAGWFVGGSLTFREGNRVAHRLARLAMEDRCDRVWMEEGP
        + SE+G ++ D    + +   +  S  FRE N VA+RLA LA     + VW+EE P
Subjt:  EISELGLLVKDAVRGVPAGWFVGGSLTFREGNRVAHRLARLAMEDRCDRVWMEEGP

A0A6J1CIF1 uncharacterized protein LOC1110112373.2e-1128.5Show/hide
Query:  MDWVVGYLNSLHNSNRRGMDLFVGRPSRVVCRWAPPEFDGLKVNVDMTFCLESGTTGVGVVCSDSWGQVGFAAAVFHENIRDADFAEGWVATVGLRLAVE
        ++W   Y+     +N       V   + V+  W PP+    K+N D +F       G+G++  +  GQV  +A  + ENI+  D AE  VA  GL+LA +
Subjt:  MDWVVGYLNSLHNSNRRGMDLFVGRPSRVVCRWAPPEFDGLKVNVDMTFCLESGTTGVGVVCSDSWGQVGFAAAVFHENIRDADFAEGWVATVGLRLAVE

Query:  -------------------TRDVEEISELGLLVKDAVRGVPAGWFVGGSLTFREGNRVAHRLARLAMEDRCDRVWMEEGPPCVCACWLRTECM
                           ++  E++SE G +V  A            +   REGN+ AH LAR A+  R   +WME+ P  + +C L  EC+
Subjt:  -------------------TRDVEEISELGLLVKDAVRGVPAGWFVGGSLTFREGNRVAHRLARLAMEDRCDRVWMEEGPPCVCACWLRTECM

A0A6J1DAR4 uncharacterized protein LOC1110189541.9e-1134.48Show/hide
Query:  WAPPEFDGLKVNVDMTFCLESGTTGVGVVCSDSWGQVGFAAAVFHENIRDADFAEGWVATVGLRLAVET---RDVEEISELGLLVKDAVRGVPAGWFVGG
        W PP+    K+N D +F       G+G++  +  GQV  AA  + ENI+  D AE   A  GL+LA E      +E++SE G +V  A            
Subjt:  WAPPEFDGLKVNVDMTFCLESGTTGVGVVCSDSWGQVGFAAAVFHENIRDADFAEGWVATVGLRLAVET---RDVEEISELGLLVKDAVRGVPAGWFVGG

Query:  SLTFREGNRVAHRLARLAMEDRCDRVWMEEGPPCVCACWLRTECM
        +   REGN+ AH LAR A+      +WME+ P  + +C L  EC+
Subjt:  SLTFREGNRVAHRLARLAMEDRCDRVWMEEGPPCVCACWLRTECM

A0A6J1DBJ7 uncharacterized protein LOC1110189732.9e-1232.83Show/hide
Query:  MDWVVGYLNSLHNSNRRGMD-LFVGRPSRVVCRWAPPEFDGLKVNVDMTFCLESGTTGVGVVCSDSWGQVGFAAAVFHENIRDADFAEGWVATVGLRLAV
        + W   YL     + R     L V RP RV   W PP    LKVNVD  F  ES   GVGV+  DS G V   A        D D+ EG+    G+ LAV
Subjt:  MDWVVGYLNSLHNSNRRGMD-LFVGRPSRVVCRWAPPEFDGLKVNVDMTFCLESGTTGVGVVCSDSWGQVGFAAAVFHENIRDADFAEGWVATVGLRLAV

Query:  ETR------DVEEISELGLLVKDAVRGVPAGWF--------------VGGSLTFREGNRVAHRLARLAMEDRCDRVWMEEGPPCVCACWLRTECMSFS
        E        + + +    LL  D V     G                V  S T R GN  AH LA+LA+     ++W+EE P  + +  L  +C S S
Subjt:  ETR------DVEEISELGLLVKDAVRGVPAGWF--------------VGGSLTFREGNRVAHRLARLAMEDRCDRVWMEEGPPCVCACWLRTECMSFS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATTGGGTTGTTGGGTATCTGAACTCGCTCCATAATTCGAATAGGAGGGGGATGGATCTGTTTGTGGGAAGGCCAAGTCGGGTTGTTTGTAGGTGGGCGCCACCTGA
GTTTGATGGGCTTAAGGTGAATGTTGATATGACCTTTTGTCTAGAGAGTGGAACGACAGGTGTAGGCGTGGTATGTAGTGACTCATGGGGGCAGGTGGGCTTCGCAGCTG
CTGTTTTCCATGAGAATATTAGAGATGCTGATTTTGCAGAAGGATGGGTGGCTACTGTCGGTTTGAGGCTCGCTGTGGAGACGCGTGATGTGGAGGAGATATCAGAGTTG
GGGCTGCTGGTGAAGGATGCGGTGAGGGGCGTTCCAGCGGGGTGGTTCGTTGGAGGTAGCCTTACGTTCCGGGAAGGCAACCGTGTTGCTCACCGTTTGGCAAGGTTGGC
GATGGAGGACAGGTGTGACCGAGTGTGGATGGAAGAAGGCCCTCCGTGCGTTTGCGCTTGTTGGCTGAGGACGGAGTGCATGAGTTTCTCGAGTGAGGTGGGAAAGGTGA
TCATTCTAAGCAGCTTCAGTCGCTGCCTCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGATTGGGTTGTTGGGTATCTGAACTCGCTCCATAATTCGAATAGGAGGGGGATGGATCTGTTTGTGGGAAGGCCAAGTCGGGTTGTTTGTAGGTGGGCGCCACCTGA
GTTTGATGGGCTTAAGGTGAATGTTGATATGACCTTTTGTCTAGAGAGTGGAACGACAGGTGTAGGCGTGGTATGTAGTGACTCATGGGGGCAGGTGGGCTTCGCAGCTG
CTGTTTTCCATGAGAATATTAGAGATGCTGATTTTGCAGAAGGATGGGTGGCTACTGTCGGTTTGAGGCTCGCTGTGGAGACGCGTGATGTGGAGGAGATATCAGAGTTG
GGGCTGCTGGTGAAGGATGCGGTGAGGGGCGTTCCAGCGGGGTGGTTCGTTGGAGGTAGCCTTACGTTCCGGGAAGGCAACCGTGTTGCTCACCGTTTGGCAAGGTTGGC
GATGGAGGACAGGTGTGACCGAGTGTGGATGGAAGAAGGCCCTCCGTGCGTTTGCGCTTGTTGGCTGAGGACGGAGTGCATGAGTTTCTCGAGTGAGGTGGGAAAGGTGA
TCATTCTAAGCAGCTTCAGTCGCTGCCTCTGA
Protein sequenceShow/hide protein sequence
MDWVVGYLNSLHNSNRRGMDLFVGRPSRVVCRWAPPEFDGLKVNVDMTFCLESGTTGVGVVCSDSWGQVGFAAAVFHENIRDADFAEGWVATVGLRLAVETRDVEEISEL
GLLVKDAVRGVPAGWFVGGSLTFREGNRVAHRLARLAMEDRCDRVWMEEGPPCVCACWLRTECMSFSSEVGKVIILSSFSRCL