; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0032465 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0032465
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionHEAT repeat-containing protein 6 isoform X1
Genome locationchr11:32942743..32944659
RNA-Seq ExpressionLag0032465
SyntenyLag0032465
Gene Ontology termsNA
InterPro domainsIPR016024 - Armadillo-type fold


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0042623.1 HEAT repeat-containing protein 6 isoform X1 [Cucumis melo var. makuwa]3.5e-4784.3Show/hide
Query:  NLAHEIKSNAVRALGNLSRLIKFSCLPSSCEKPVSNSGLYPVANNSEDLLSKSDSKVYPGCTSKNLYDTTSFYNSSFLERIVQAFISGITTGNVKVQWNV
        N   +IKSNAVRALGNLSRLIKFSCL S CE+P SNSGLY VANNSEDL SK DSKV  GCTSKNL D  SFY+SSFLERIVQAFISGITTGNVKVQWNV
Subjt:  NLAHEIKSNAVRALGNLSRLIKFSCLPSSCEKPVSNSGLYPVANNSEDLLSKSDSKVYPGCTSKNLYDTTSFYNSSFLERIVQAFISGITTGNVKVQWNV

Query:  CHALSNLFLNETLRLQDMDRM
        CHALSNLFLNETLRLQD+DR+
Subjt:  CHALSNLFLNETLRLQDMDRM
XP_022159607.1 HEAT repeat-containing protein 6 isoform X1 [Momordica charantia]3.2e-4885.12Show/hide
Query:  NLAHEIKSNAVRALGNLSRLIKFSCLPSSCEKPVSNSGLYPVANNSEDLLSKSDSKVYPGCTSKNLYDTTSFYNSSFLERIVQAFISGITTGNVKVQWNV
        N   +IKSNAVRALGNLSRLIKF C PS+CEKPVSNSGLY +AN SEDLLSKSDSKV+PGCTSKNLYDT  FYNSS LE IVQAFISGITTGNVKVQWNV
Subjt:  NLAHEIKSNAVRALGNLSRLIKFSCLPSSCEKPVSNSGLYPVANNSEDLLSKSDSKVYPGCTSKNLYDTTSFYNSSFLERIVQAFISGITTGNVKVQWNV

Query:  CHALSNLFLNETLRLQDMDRM
        CHA+SNLFLNETLRL DMDR+
Subjt:  CHALSNLFLNETLRLQDMDRM
XP_022159609.1 HEAT repeat-containing protein 6 isoform X2 [Momordica charantia]3.2e-4885.12Show/hide
Query:  NLAHEIKSNAVRALGNLSRLIKFSCLPSSCEKPVSNSGLYPVANNSEDLLSKSDSKVYPGCTSKNLYDTTSFYNSSFLERIVQAFISGITTGNVKVQWNV
        N   +IKSNAVRALGNLSRLIKF C PS+CEKPVSNSGLY +AN SEDLLSKSDSKV+PGCTSKNLYDT  FYNSS LE IVQAFISGITTGNVKVQWNV
Subjt:  NLAHEIKSNAVRALGNLSRLIKFSCLPSSCEKPVSNSGLYPVANNSEDLLSKSDSKVYPGCTSKNLYDTTSFYNSSFLERIVQAFISGITTGNVKVQWNV

Query:  CHALSNLFLNETLRLQDMDRM
        CHA+SNLFLNETLRL DMDR+
Subjt:  CHALSNLFLNETLRLQDMDRM
XP_022159610.1 HEAT repeat-containing protein 6 isoform X3 [Momordica charantia]3.2e-4885.12Show/hide
Query:  NLAHEIKSNAVRALGNLSRLIKFSCLPSSCEKPVSNSGLYPVANNSEDLLSKSDSKVYPGCTSKNLYDTTSFYNSSFLERIVQAFISGITTGNVKVQWNV
        N   +IKSNAVRALGNLSRLIKF C PS+CEKPVSNSGLY +AN SEDLLSKSDSKV+PGCTSKNLYDT  FYNSS LE IVQAFISGITTGNVKVQWNV
Subjt:  NLAHEIKSNAVRALGNLSRLIKFSCLPSSCEKPVSNSGLYPVANNSEDLLSKSDSKVYPGCTSKNLYDTTSFYNSSFLERIVQAFISGITTGNVKVQWNV

Query:  CHALSNLFLNETLRLQDMDRM
        CHA+SNLFLNETLRL DMDR+
Subjt:  CHALSNLFLNETLRLQDMDRM
XP_022159611.1 HEAT repeat-containing protein 6 isoform X4 [Momordica charantia]3.2e-4885.12Show/hide
Query:  NLAHEIKSNAVRALGNLSRLIKFSCLPSSCEKPVSNSGLYPVANNSEDLLSKSDSKVYPGCTSKNLYDTTSFYNSSFLERIVQAFISGITTGNVKVQWNV
        N   +IKSNAVRALGNLSRLIKF C PS+CEKPVSNSGLY +AN SEDLLSKSDSKV+PGCTSKNLYDT  FYNSS LE IVQAFISGITTGNVKVQWNV
Subjt:  NLAHEIKSNAVRALGNLSRLIKFSCLPSSCEKPVSNSGLYPVANNSEDLLSKSDSKVYPGCTSKNLYDTTSFYNSSFLERIVQAFISGITTGNVKVQWNV

Query:  CHALSNLFLNETLRLQDMDRM
        CHA+SNLFLNETLRL DMDR+
Subjt:  CHALSNLFLNETLRLQDMDRM
TrEMBL top hitse value%identityAlignment
A0A5A7TH89 HEAT repeat-containing protein 6 isoform X11.7e-4784.3Show/hide
Query:  NLAHEIKSNAVRALGNLSRLIKFSCLPSSCEKPVSNSGLYPVANNSEDLLSKSDSKVYPGCTSKNLYDTTSFYNSSFLERIVQAFISGITTGNVKVQWNV
        N   +IKSNAVRALGNLSRLIKFSCL S CE+P SNSGLY VANNSEDL SK DSKV  GCTSKNL D  SFY+SSFLERIVQAFISGITTGNVKVQWNV
Subjt:  NLAHEIKSNAVRALGNLSRLIKFSCLPSSCEKPVSNSGLYPVANNSEDLLSKSDSKVYPGCTSKNLYDTTSFYNSSFLERIVQAFISGITTGNVKVQWNV

Query:  CHALSNLFLNETLRLQDMDRM
        CHALSNLFLNETLRLQD+DR+
Subjt:  CHALSNLFLNETLRLQDMDRM
A0A6J1DZ80 HEAT repeat-containing protein 6 isoform X31.5e-4885.12Show/hide
Query:  NLAHEIKSNAVRALGNLSRLIKFSCLPSSCEKPVSNSGLYPVANNSEDLLSKSDSKVYPGCTSKNLYDTTSFYNSSFLERIVQAFISGITTGNVKVQWNV
        N   +IKSNAVRALGNLSRLIKF C PS+CEKPVSNSGLY +AN SEDLLSKSDSKV+PGCTSKNLYDT  FYNSS LE IVQAFISGITTGNVKVQWNV
Subjt:  NLAHEIKSNAVRALGNLSRLIKFSCLPSSCEKPVSNSGLYPVANNSEDLLSKSDSKVYPGCTSKNLYDTTSFYNSSFLERIVQAFISGITTGNVKVQWNV

Query:  CHALSNLFLNETLRLQDMDRM
        CHA+SNLFLNETLRL DMDR+
Subjt:  CHALSNLFLNETLRLQDMDRM
A0A6J1E0A2 HEAT repeat-containing protein 6 isoform X11.5e-4885.12Show/hide
Query:  NLAHEIKSNAVRALGNLSRLIKFSCLPSSCEKPVSNSGLYPVANNSEDLLSKSDSKVYPGCTSKNLYDTTSFYNSSFLERIVQAFISGITTGNVKVQWNV
        N   +IKSNAVRALGNLSRLIKF C PS+CEKPVSNSGLY +AN SEDLLSKSDSKV+PGCTSKNLYDT  FYNSS LE IVQAFISGITTGNVKVQWNV
Subjt:  NLAHEIKSNAVRALGNLSRLIKFSCLPSSCEKPVSNSGLYPVANNSEDLLSKSDSKVYPGCTSKNLYDTTSFYNSSFLERIVQAFISGITTGNVKVQWNV

Query:  CHALSNLFLNETLRLQDMDRM
        CHA+SNLFLNETLRL DMDR+
Subjt:  CHALSNLFLNETLRLQDMDRM
A0A6J1E2V4 HEAT repeat-containing protein 6 isoform X21.5e-4885.12Show/hide
Query:  NLAHEIKSNAVRALGNLSRLIKFSCLPSSCEKPVSNSGLYPVANNSEDLLSKSDSKVYPGCTSKNLYDTTSFYNSSFLERIVQAFISGITTGNVKVQWNV
        N   +IKSNAVRALGNLSRLIKF C PS+CEKPVSNSGLY +AN SEDLLSKSDSKV+PGCTSKNLYDT  FYNSS LE IVQAFISGITTGNVKVQWNV
Subjt:  NLAHEIKSNAVRALGNLSRLIKFSCLPSSCEKPVSNSGLYPVANNSEDLLSKSDSKVYPGCTSKNLYDTTSFYNSSFLERIVQAFISGITTGNVKVQWNV

Query:  CHALSNLFLNETLRLQDMDRM
        CHA+SNLFLNETLRL DMDR+
Subjt:  CHALSNLFLNETLRLQDMDRM
A0A6J1E4G1 HEAT repeat-containing protein 6 isoform X41.5e-4885.12Show/hide
Query:  NLAHEIKSNAVRALGNLSRLIKFSCLPSSCEKPVSNSGLYPVANNSEDLLSKSDSKVYPGCTSKNLYDTTSFYNSSFLERIVQAFISGITTGNVKVQWNV
        N   +IKSNAVRALGNLSRLIKF C PS+CEKPVSNSGLY +AN SEDLLSKSDSKV+PGCTSKNLYDT  FYNSS LE IVQAFISGITTGNVKVQWNV
Subjt:  NLAHEIKSNAVRALGNLSRLIKFSCLPSSCEKPVSNSGLYPVANNSEDLLSKSDSKVYPGCTSKNLYDTTSFYNSSFLERIVQAFISGITTGNVKVQWNV

Query:  CHALSNLFLNETLRLQDMDRM
        CHA+SNLFLNETLRL DMDR+
Subjt:  CHALSNLFLNETLRLQDMDRM
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G38120.1 ARM repeat superfamily protein6.0e-2146.09Show/hide
Query:  EIKSNAVRALGNLSRLIKFSCLPSSCEKPVSNSGLYPVANNSEDLLSKSDSKVYPGCTSKNLYDTTSFYNSSFLERIVQAFISGITTGNVKVQWNVCHAL
        ++KSNAVRALG++S+ +K  C+ S             + +  +D+L       +P   S N +  +   ++ +LER VQAF+S +TTGNVKVQWNVCHAL
Subjt:  EIKSNAVRALGNLSRLIKFSCLPSSCEKPVSNSGLYPVANNSEDLLSKSDSKVYPGCTSKNLYDTTSFYNSSFLERIVQAFISGITTGNVKVQWNVCHAL

Query:  SNLFLNETLRLQDMD
        SNLF NET++LQDMD
Subjt:  SNLFLNETLRLQDMD

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGGAGAACTTGGCCCACGAGATTAAATCAAATGCTGTCAGAGCTCTTGGAAATCTTTCAAGGTTGATAAAGTTTTCGTGTTTACCTTCCTCCTGTGAGAAGCCTGT
TAGCAATTCAGGGTTGTATCCAGTGGCTAATAACTCTGAGGATCTCTTGTCGAAGAGTGATTCAAAAGTTTATCCTGGATGCACATCTAAAAATCTCTATGATACAACTT
CTTTCTATAATTCGAGTTTTCTCGAGAGAATAGTTCAGGCATTTATTTCTGGGATCACAACGGGAAATGTCAAGGTCCAGTGGAATGTTTGTCATGCATTAAGCAACTTA
TTTTTAAATGAAACATTGAGACTGCAGGATATGGACAGGATGTGGACAGGGGCTTGCCTACGGCGAGGGGCAATGCGAGGGTCACGTGGACCGCCTCTAGGTGGTATGCG
AGGCAAGCACCTTCAATAA
mRNA sequenceShow/hide mRNA sequence
ATGAAGGAGAACTTGGCCCACGAGATTAAATCAAATGCTGTCAGAGCTCTTGGAAATCTTTCAAGGTTGATAAAGTTTTCGTGTTTACCTTCCTCCTGTGAGAAGCCTGT
TAGCAATTCAGGGTTGTATCCAGTGGCTAATAACTCTGAGGATCTCTTGTCGAAGAGTGATTCAAAAGTTTATCCTGGATGCACATCTAAAAATCTCTATGATACAACTT
CTTTCTATAATTCGAGTTTTCTCGAGAGAATAGTTCAGGCATTTATTTCTGGGATCACAACGGGAAATGTCAAGGTCCAGTGGAATGTTTGTCATGCATTAAGCAACTTA
TTTTTAAATGAAACATTGAGACTGCAGGATATGGACAGGATGTGGACAGGGGCTTGCCTACGGCGAGGGGCAATGCGAGGGTCACGTGGACCGCCTCTAGGTGGTATGCG
AGGCAAGCACCTTCAATAA
Protein sequenceShow/hide protein sequence
MKENLAHEIKSNAVRALGNLSRLIKFSCLPSSCEKPVSNSGLYPVANNSEDLLSKSDSKVYPGCTSKNLYDTTSFYNSSFLERIVQAFISGITTGNVKVQWNVCHALSNL
FLNETLRLQDMDRMWTGACLRRGAMRGSRGPPLGGMRGKHLQ