CuGenDBv2

Gene ID	Lag0032466
Organism	Luffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Description	HEAT repeat-containing protein 6 isoform X1
Genome location	chr11:32954303..32955069
RNA-Seq Expression	Lag0032466
Synteny	Lag0032466
Gene Ontology terms	GO:0005515 - protein binding (molecular function)
InterPro domains	IPR000357 - HEAT repeat IPR011989 - Armadillo-like helical IPR016024 - Armadillo-type fold

Homology

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GenBank top hits

e value

%identity

Alignment

KAG7035537.1 HEAT repeat-containing protein 6, partial [Cucurbita argyrosperma subsp. argyrosperma]

8.5e-52

92.31

Show/hide

Query:  EDYVLSSVVNAAVYDEVPSVRSAACRAIGVISCFPQISQSAEILDKFIHAVEINTRDSLVSVRVTASWALANICESIRRFFDDSPSRQLTDSIERSHILT
        EDY+LSSVVNAAVYDEVPSVRSAACRAIGVISCFPQ+SQSAEILDKFIHAVEINTRDSLVSVR TASWALANICESIRRFFDD PSRQ TDSIERSH LT
Subjt:  EDYVLSSVVNAAVYDEVPSVRSAACRAIGVISCFPQISQSAEILDKFIHAVEINTRDSLVSVRVTASWALANICESIRRFFDDSPSRQLTDSIERSHILT

Query:  LLIECSLRLANDGDKVE
        LLI+CSLRLANDGDK++
Subjt:  LLIECSLRLANDGDKVE

XP_022957979.1 HEAT repeat-containing protein 6 isoform X1 [Cucurbita moschata]

8.5e-52

92.31

Show/hide

Query:  EDYVLSSVVNAAVYDEVPSVRSAACRAIGVISCFPQISQSAEILDKFIHAVEINTRDSLVSVRVTASWALANICESIRRFFDDSPSRQLTDSIERSHILT
        EDY+LSSVVNAAVYDEVPSVRSAACRAIGVISCFPQ+SQSAEILDKFIHAVEINTRDSLVSVR TASWALANICESIRRFFDD PSRQ TDSIERSH LT
Subjt:  EDYVLSSVVNAAVYDEVPSVRSAACRAIGVISCFPQISQSAEILDKFIHAVEINTRDSLVSVRVTASWALANICESIRRFFDDSPSRQLTDSIERSHILT

Query:  LLIECSLRLANDGDKVE
        LLI+CSLRLANDGDK++
Subjt:  LLIECSLRLANDGDKVE

XP_022957981.1 HEAT repeat-containing protein 6 isoform X3 [Cucurbita moschata]

8.5e-52

92.31

Show/hide

Query:  EDYVLSSVVNAAVYDEVPSVRSAACRAIGVISCFPQISQSAEILDKFIHAVEINTRDSLVSVRVTASWALANICESIRRFFDDSPSRQLTDSIERSHILT
        EDY+LSSVVNAAVYDEVPSVRSAACRAIGVISCFPQ+SQSAEILDKFIHAVEINTRDSLVSVR TASWALANICESIRRFFDD PSRQ TDSIERSH LT
Subjt:  EDYVLSSVVNAAVYDEVPSVRSAACRAIGVISCFPQISQSAEILDKFIHAVEINTRDSLVSVRVTASWALANICESIRRFFDDSPSRQLTDSIERSHILT

Query:  LLIECSLRLANDGDKVE
        LLI+CSLRLANDGDK++
Subjt:  LLIECSLRLANDGDKVE

XP_023534365.1 HEAT repeat-containing protein 6 isoform X1 [Cucurbita pepo subsp. pepo]

8.5e-52

92.31

Show/hide

Query:  EDYVLSSVVNAAVYDEVPSVRSAACRAIGVISCFPQISQSAEILDKFIHAVEINTRDSLVSVRVTASWALANICESIRRFFDDSPSRQLTDSIERSHILT
        EDY+LSSVVNAAVYDEVPSVRSAACRAIGVISCFPQ+SQSAEILDKFIHAVEINTRDSLVSVR TASWALANICESIRRFFDD PSRQ TDSIERSH LT
Subjt:  EDYVLSSVVNAAVYDEVPSVRSAACRAIGVISCFPQISQSAEILDKFIHAVEINTRDSLVSVRVTASWALANICESIRRFFDDSPSRQLTDSIERSHILT

Query:  LLIECSLRLANDGDKVE
        LLI+CSLRLANDGDK++
Subjt:  LLIECSLRLANDGDKVE

XP_023534366.1 HEAT repeat-containing protein 6 isoform X2 [Cucurbita pepo subsp. pepo]

8.5e-52

92.31

Show/hide

Query:  EDYVLSSVVNAAVYDEVPSVRSAACRAIGVISCFPQISQSAEILDKFIHAVEINTRDSLVSVRVTASWALANICESIRRFFDDSPSRQLTDSIERSHILT
        EDY+LSSVVNAAVYDEVPSVRSAACRAIGVISCFPQ+SQSAEILDKFIHAVEINTRDSLVSVR TASWALANICESIRRFFDD PSRQ TDSIERSH LT
Subjt:  EDYVLSSVVNAAVYDEVPSVRSAACRAIGVISCFPQISQSAEILDKFIHAVEINTRDSLVSVRVTASWALANICESIRRFFDDSPSRQLTDSIERSHILT

Query:  LLIECSLRLANDGDKVE
        LLI+CSLRLANDGDK++
Subjt:  LLIECSLRLANDGDKVE

TrEMBL top hits

e value

%identity

Alignment

A0A6J1H262 HEAT repeat-containing protein 6 isoform X2

4.1e-52

92.31

Show/hide

Query:  EDYVLSSVVNAAVYDEVPSVRSAACRAIGVISCFPQISQSAEILDKFIHAVEINTRDSLVSVRVTASWALANICESIRRFFDDSPSRQLTDSIERSHILT
        EDY+LSSVVNAAVYDEVPSVRSAACRAIGVISCFPQ+SQSAEILDKFIHAVEINTRDSLVSVR TASWALANICESIRRFFDD PSRQ TDSIERSH LT
Subjt:  EDYVLSSVVNAAVYDEVPSVRSAACRAIGVISCFPQISQSAEILDKFIHAVEINTRDSLVSVRVTASWALANICESIRRFFDDSPSRQLTDSIERSHILT

Query:  LLIECSLRLANDGDKVE
        LLI+CSLRLANDGDK++
Subjt:  LLIECSLRLANDGDKVE

A0A6J1H3P0 HEAT repeat-containing protein 6 isoform X1

4.1e-52

92.31

Show/hide

Query:  EDYVLSSVVNAAVYDEVPSVRSAACRAIGVISCFPQISQSAEILDKFIHAVEINTRDSLVSVRVTASWALANICESIRRFFDDSPSRQLTDSIERSHILT
        EDY+LSSVVNAAVYDEVPSVRSAACRAIGVISCFPQ+SQSAEILDKFIHAVEINTRDSLVSVR TASWALANICESIRRFFDD PSRQ TDSIERSH LT
Subjt:  EDYVLSSVVNAAVYDEVPSVRSAACRAIGVISCFPQISQSAEILDKFIHAVEINTRDSLVSVRVTASWALANICESIRRFFDDSPSRQLTDSIERSHILT

Query:  LLIECSLRLANDGDKVE
        LLI+CSLRLANDGDK++
Subjt:  LLIECSLRLANDGDKVE

A0A6J1K492 HEAT repeat-containing protein 6 isoform X3

4.1e-52

92.31

Show/hide

Query:  EDYVLSSVVNAAVYDEVPSVRSAACRAIGVISCFPQISQSAEILDKFIHAVEINTRDSLVSVRVTASWALANICESIRRFFDDSPSRQLTDSIERSHILT
        EDY+LSSVVNAAVYDEVPSVRSAACRAIGVISCFPQ+SQSAEILDKFIHAVEINTRDSLVSVR TASWALANICESIRRFFDD PSRQ TDSIERSH LT
Subjt:  EDYVLSSVVNAAVYDEVPSVRSAACRAIGVISCFPQISQSAEILDKFIHAVEINTRDSLVSVRVTASWALANICESIRRFFDDSPSRQLTDSIERSHILT

Query:  LLIECSLRLANDGDKVE
        LLI+CSLRLANDGDK++
Subjt:  LLIECSLRLANDGDKVE

A0A6J1K894 HEAT repeat-containing protein 6 isoform X2

4.1e-52

92.31

Show/hide

Query:  EDYVLSSVVNAAVYDEVPSVRSAACRAIGVISCFPQISQSAEILDKFIHAVEINTRDSLVSVRVTASWALANICESIRRFFDDSPSRQLTDSIERSHILT
        EDY+LSSVVNAAVYDEVPSVRSAACRAIGVISCFPQ+SQSAEILDKFIHAVEINTRDSLVSVR TASWALANICESIRRFFDD PSRQ TDSIERSH LT
Subjt:  EDYVLSSVVNAAVYDEVPSVRSAACRAIGVISCFPQISQSAEILDKFIHAVEINTRDSLVSVRVTASWALANICESIRRFFDDSPSRQLTDSIERSHILT

Query:  LLIECSLRLANDGDKVE
        LLI+CSLRLANDGDK++
Subjt:  LLIECSLRLANDGDKVE

A0A6J1KAB7 HEAT repeat-containing protein 6 isoform X1

4.1e-52

92.31

Show/hide

Query:  EDYVLSSVVNAAVYDEVPSVRSAACRAIGVISCFPQISQSAEILDKFIHAVEINTRDSLVSVRVTASWALANICESIRRFFDDSPSRQLTDSIERSHILT
        EDY+LSSVVNAAVYDEVPSVRSAACRAIGVISCFPQ+SQSAEILDKFIHAVEINTRDSLVSVR TASWALANICESIRRFFDD PSRQ TDSIERSH LT
Subjt:  EDYVLSSVVNAAVYDEVPSVRSAACRAIGVISCFPQISQSAEILDKFIHAVEINTRDSLVSVRVTASWALANICESIRRFFDDSPSRQLTDSIERSHILT

Query:  LLIECSLRLANDGDKVE
        LLI+CSLRLANDGDK++
Subjt:  LLIECSLRLANDGDKVE

SwissProt top hits

e value

%identity

Alignment

Q559R1 Putative uncharacterized protein DDB_G0272456

7.3e-06

29.46

Show/hide

Query:  LSSVVNAAVYDEVPSVRSAACRAIGVISCFPQISQSAEILDKFIHAVEINTRDSLVSVRVTASWALANICESIRRFFDDSPSRQLTDSIERSHILTLLIE
        L SVV   ++DE   VR++ACR++G++     +   A  L      +  +  D  ++VR+ A W+LAN+C+ +      S    L + I R  IL+ ++E
Subjt:  LSSVVNAAVYDEVPSVRSAACRAIGVISCFPQISQSAEILDKFIHAVEINTRDSLVSVRVTASWALANICESIRRFFDDSPSRQLTDSIERSHILTLLIE

Query:  CSLRLANDGDKV
          L  + D  K+
Subjt:  CSLRLANDGDKV

Arabidopsis top hits

e value

%identity

Alignment

AT4G38120.1 ARM repeat superfamily protein

3.2e-33

59.83

Show/hide

Query:  EDYVLSSVVNAAVYDEVPSVRSAACRAIGVISCFPQISQSAEILDKFIHAVEINTRDSLVSVRVTASWALANICESIRRFFDDSPSRQLTDSIERSHILT
        +D++ SS++ AA++D+ PSVRSAACRAIGVISCFP+ S SAEI +KFI AVE NTRDSL SVR+TASWALAN+C+++R   DD     L  +   S ++ 
Subjt:  EDYVLSSVVNAAVYDEVPSVRSAACRAIGVISCFPQISQSAEILDKFIHAVEINTRDSLVSVRVTASWALANICESIRRFFDDSPSRQLTDSIERSHILT

Query:  LLIECSLRLANDGDKVE
         LIEC+LRL  DGDKV+
Subjt:  LLIECSLRLANDGDKVE

Sequences

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CDS sequence

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ATGGAGGACTATGTATTGTCTTCAGTGGTAAATGCTGCAGTGTATGATGAAGTGCCTTCAGTGAGGTCAGCTGCTTGTCGTGCCATTGGTGTCATATCATGTTTCCCTCA
AATTTCTCAAAGCGCAGAGATTCTTGACAAGTTTATCCATGCTGTTGAGATCAATACTCGTGATTCTTTGGTTTCGGTAAGAGTAACAGCCTCTTGGGCATTGGCAAATA
TATGTGAGTCAATCCGTCGCTTTTTTGATGATTCTCCTTCGAGACAACTCACAGATTCAATAGAACGTTCTCACATATTAACACTATTAATCGAGTGCAGTTTGCGTCTA
GCAAATGATGGAGACAAGGTAGAACTTCTACTTTGCAAGTAG

mRNA sequence

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Protein sequence

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MEDYVLSSVVNAAVYDEVPSVRSAACRAIGVISCFPQISQSAEILDKFIHAVEINTRDSLVSVRVTASWALANICESIRRFFDDSPSRQLTDSIERSHILTLLIECSLRL
ANDGDKVELLLCK

Lag0032466 (gene) of Sponge gourd (AG-4) v1 genome