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Lag0032467 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0032467
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionTransposon TX1 uncharacterized 149 kDa protein
Genome locationchr11:32977607..32978319
RNA-Seq ExpressionLag0032467
SyntenyLag0032467
Gene Ontology termsGO:0006281 - DNA repair (biological process)
GO:0110165 - cellular anatomical structure (cellular component)
GO:0004518 - nuclease activity (molecular function)
GO:0140097 - catalytic activity, acting on DNA (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0063088.1 uncharacterized protein E6C27_scaffold623G00050 [Cucumis melo var. makuwa]1.9e-0643.33Show/hide
Query:  VDETKMVSFDQQLMKSIWSSRKVGWVNVKSWGKFGGLLIMWDENNLKILEFLKGGYTVSV
        + E+K   FD   +KS+WSS+  GW   + +G  GG+L +WD + LK++E LKGGY++S+
Subjt:  VDETKMVSFDQQLMKSIWSSRKVGWVNVKSWGKFGGLLIMWDENNLKILEFLKGGYTVSV

RVW27472.1 Transposon TX1 uncharacterized 149 kDa protein [Vitis vinifera]8.1e-0539.68Show/hide
Query:  VDETKMVSFDQQLMKSIWSSRKVGWVNVKSWGKFGGLLIMWDENNLKILEFLKGGYTVSVKVS
        + ETK  + D++ + S+W++R   WV + + G  GG+LI+WD  NL+  E + G ++VSVK S
Subjt:  VDETKMVSFDQQLMKSIWSSRKVGWVNVKSWGKFGGLLIMWDENNLKILEFLKGGYTVSVKVS

RVW57183.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera]6.2e-0540Show/hide
Query:  EDLISPTVDETKMVSFDQQLMKSIWSSRKVGWVNVKSWGKFGGLLIMWDENNLKILEFLKGGYTVSVKVS
        EDL      ETK   +D + + S+W    V WV + + G  GG++IMWD NNLK  E + G ++V+VK++
Subjt:  EDLISPTVDETKMVSFDQQLMKSIWSSRKVGWVNVKSWGKFGGLLIMWDENNLKILEFLKGGYTVSVKVS

TYJ98683.1 hypothetical protein E5676_scaffold429G00120 [Cucumis melo var. makuwa]2.7e-0843.84Show/hide
Query:  DQLVICEDLISPTVDETKMVSFDQQLMKSIWSSRKVGWVNVKSWGKFGGLLIMWDENNLKILEFLKGGYTVSV
        D LVIC           +    D  L+KS+WSS+ +GW  V+S+G+FGG+L MWD + +K++E LKGGY++S+
Subjt:  DQLVICEDLISPTVDETKMVSFDQQLMKSIWSSRKVGWVNVKSWGKFGGLLIMWDENNLKILEFLKGGYTVSV

XP_031739979.1 uncharacterized protein LOC116403332 [Cucumis sativus]6.2e-0531.25Show/hide
Query:  VDETKMVSFDQQLMKSIWSSRKVGWVNVKSWGKFGGLLIMWDENNLKILEFLKGGYTVSVKVSF
        + ++K+ + ++ L+KS+WSS  VGW  ++++G  GG+LI+W E+++ +++ ++G +++S+   F
Subjt:  VDETKMVSFDQQLMKSIWSSRKVGWVNVKSWGKFGGLLIMWDENNLKILEFLKGGYTVSVKVSF

TrEMBL top hitse value%identityAlignment
A0A2N9J6S4 Uncharacterized protein3.9e-0540.98Show/hide
Query:  VDETKMVSFDQQLMKSIWSSRKVGWVNVKSWGKFGGLLIMWDENNLKILEFLKGGYTVSVK
        + ETKM  FD++L+KS+W S  V W+++ S G  GG+L+MWD+  L+ ++ + G +++S K
Subjt:  VDETKMVSFDQQLMKSIWSSRKVGWVNVKSWGKFGGLLIMWDENNLKILEFLKGGYTVSVK

A0A438CWA7 Transposon TX1 uncharacterized 149 kDa protein3.9e-0539.68Show/hide
Query:  VDETKMVSFDQQLMKSIWSSRKVGWVNVKSWGKFGGLLIMWDENNLKILEFLKGGYTVSVKVS
        + ETK  + D++ + S+W++R   WV + + G  GG+LI+WD  NL+  E + G ++VSVK S
Subjt:  VDETKMVSFDQQLMKSIWSSRKVGWVNVKSWGKFGGLLIMWDENNLKILEFLKGGYTVSVKVS

A0A438FB27 Retrovirus-related Pol polyprotein from transposon TNT 1-943.0e-0540Show/hide
Query:  EDLISPTVDETKMVSFDQQLMKSIWSSRKVGWVNVKSWGKFGGLLIMWDENNLKILEFLKGGYTVSVKVS
        EDL      ETK   +D + + S+W    V WV + + G  GG++IMWD NNLK  E + G ++V+VK++
Subjt:  EDLISPTVDETKMVSFDQQLMKSIWSSRKVGWVNVKSWGKFGGLLIMWDENNLKILEFLKGGYTVSVKVS

A0A5A7V639 Uncharacterized protein9.3e-0743.33Show/hide
Query:  VDETKMVSFDQQLMKSIWSSRKVGWVNVKSWGKFGGLLIMWDENNLKILEFLKGGYTVSV
        + E+K   FD   +KS+WSS+  GW   + +G  GG+L +WD + LK++E LKGGY++S+
Subjt:  VDETKMVSFDQQLMKSIWSSRKVGWVNVKSWGKFGGLLIMWDENNLKILEFLKGGYTVSV

A0A5D3BHE3 Uncharacterized protein1.3e-0843.84Show/hide
Query:  DQLVICEDLISPTVDETKMVSFDQQLMKSIWSSRKVGWVNVKSWGKFGGLLIMWDENNLKILEFLKGGYTVSV
        D LVIC           +    D  L+KS+WSS+ +GW  V+S+G+FGG+L MWD + +K++E LKGGY++S+
Subjt:  DQLVICEDLISPTVDETKMVSFDQQLMKSIWSSRKVGWVNVKSWGKFGGLLIMWDENNLKILEFLKGGYTVSV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAATCAATTATACATTCAAAGCCTCCTTTGACAAAAGGGGTTTTAGTACCTCCTAATTTCCAAGCTGATAAATCATTACCTTCCTCTTCACATACTATAGAATCCAA
TGAAGAATCAGAAATTAGTGATAATGAAGTTTCATCAGATCAGTTGGTTATTTGTGAAGATTTGATTTCACCAACAGTTGATGAAACGAAGATGGTTTCATTTGATCAGC
AATTGATGAAATCTATTTGGAGCTCTAGAAAGGTTGGGTGGGTTAATGTGAAATCTTGGGGAAAGTTTGGAGGATTGTTAATTATGTGGGATGAGAATAATCTGAAAATT
CTGGAATTTCTCAAAGGTGGTTATACGGTATCAGTAAAAGTATCCTTCACATGA
mRNA sequenceShow/hide mRNA sequence
ATGCAATCAATTATACATTCAAAGCCTCCTTTGACAAAAGGGGTTTTAGTACCTCCTAATTTCCAAGCTGATAAATCATTACCTTCCTCTTCACATACTATAGAATCCAA
TGAAGAATCAGAAATTAGTGATAATGAAGTTTCATCAGATCAGTTGGTTATTTGTGAAGATTTGATTTCACCAACAGTTGATGAAACGAAGATGGTTTCATTTGATCAGC
AATTGATGAAATCTATTTGGAGCTCTAGAAAGGTTGGGTGGGTTAATGTGAAATCTTGGGGAAAGTTTGGAGGATTGTTAATTATGTGGGATGAGAATAATCTGAAAATT
CTGGAATTTCTCAAAGGTGGTTATACGGTATCAGTAAAAGTATCCTTCACATGA
Protein sequenceShow/hide protein sequence
MQSIIHSKPPLTKGVLVPPNFQADKSLPSSSHTIESNEESEISDNEVSSDQLVICEDLISPTVDETKMVSFDQQLMKSIWSSRKVGWVNVKSWGKFGGLLIMWDENNLKI
LEFLKGGYTVSVKVSFT