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Lag0032470 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0032470
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionTransposon Ty3-G Gag-Pol polyprotein
Genome locationchr11:32993300..32993794
RNA-Seq ExpressionLag0032470
SyntenyLag0032470
Gene Ontology termsGO:0044237 - cellular metabolic process (biological process)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAN79625.1 hypothetical protein VITISV_035899 [Vitis vinifera]5.1e-3652.2Show/hide
Query:  LTQAEFAFNHMKNKCTGKSPFEVVYTHLPRVTFDLVNLPTIVDVSSEAEHMAKRIADLHFEVKKHLERANASYKQSTDSHRWFKEFQVGDLLMVHLRKFW
        L Q EFAFN M N+ T K+PFEVVYT +PR   DL+ LP   DV+  AE  A+RI  +H EVKK+LE+ N  YK   D H+  K F  GDL+MV+LRK  
Subjt:  LTQAEFAFNHMKNKCTGKSPFEVVYTHLPRVTFDLVNLPTIVDVSSEAEHMAKRIADLHFEVKKHLERANASYKQSTDSHRWFKEFQVGDLLMVHLRKFW

Query:  LPTGYHNKLTNRKLGPFSILERIGDNAYRIDLPSTFLINNTFNVADLYSYFVLDDFTLQ
         PT  +N     K+GPF +L++IGDNAY+IDL +   I+NTFNV D++ YF  D+F+LQ
Subjt:  LPTGYHNKLTNRKLGPFSILERIGDNAYRIDLPSTFLINNTFNVADLYSYFVLDDFTLQ

KAA0054760.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]2.3e-3652.5Show/hide
Query:  LQLTQAEFAFNHMKNKCTGKSPFEVVYTHLPRVTFDLVNLPTIVDVSSEAEHMAKRIADLHFEVKKHLERANASYKQSTDSHRWFKEFQVGDLLMVHLRK
        L L QAEFAFN+MKN+ TG+ PF++VYT  PR+T DL +LPT V++  EAE M   I  LH EV  HL +   SYK+S D  R   EF  GDL+M+HLRK
Subjt:  LQLTQAEFAFNHMKNKCTGKSPFEVVYTHLPRVTFDLVNLPTIVDVSSEAEHMAKRIADLHFEVKKHLERANASYKQSTDSHRWFKEFQVGDLLMVHLRK

Query:  FWLPTGYHNKLTNRKLGPFSILERIGDNAYRIDLPSTFLINNTFNVADLYSYFVLDDFTL
           PTG +NKL ++++ PF ILE+ GDNA++I LP    I+  FNVADL  Y   D F L
Subjt:  FWLPTGYHNKLTNRKLGPFSILERIGDNAYRIDLPSTFLINNTFNVADLYSYFVLDDFTL

KAA0063264.1 Transposon Ty3-G Gag-Pol polyprotein [Cucumis melo var. makuwa]4.6e-3756.08Show/hide
Query:  MKNKCTGKSPFEVVYTHLPRVTFDLVNLPTIVDVSSEAEHMAKRIADLHFEVKKHLERANASYKQSTDSHRWFKEFQVGDLLMVHLRKFWLPTGYHNKLT
        M N+ T KSPFEVVYT LPRVTF L +LP+ VDVS EA+ M   I  LH EVK HLE AN SYK +T++H+  KE+QVGDL+MV+L K   P+ +H+K+T
Subjt:  MKNKCTGKSPFEVVYTHLPRVTFDLVNLPTIVDVSSEAEHMAKRIADLHFEVKKHLERANASYKQSTDSHRWFKEFQVGDLLMVHLRKFWLPTGYHNKLT

Query:  NRKLGPFSILERIGDNAYRIDLPSTFLINNTFNVADLYSYFVLDDFTL
        N+ + PF ILER+  NAYR+DL +  +IN +FN++DL  Y  LD F+L
Subjt:  NRKLGPFSILERIGDNAYRIDLPSTFLINNTFNVADLYSYFVLDDFTL

RVW14376.1 Transposon Ty3-G Gag-Pol polyprotein [Vitis vinifera]6.0e-3752.2Show/hide
Query:  LTQAEFAFNHMKNKCTGKSPFEVVYTHLPRVTFDLVNLPTIVDVSSEAEHMAKRIADLHFEVKKHLERANASYKQSTDSHRWFKEFQVGDLLMVHLRKFW
        L Q EFAFN M N+ T K+PFEVVYT +PR T DL+ LP    V+  AE  A+RI  +H EVKK+LE AN  YK + + HR  K F  GDL++VH RK  
Subjt:  LTQAEFAFNHMKNKCTGKSPFEVVYTHLPRVTFDLVNLPTIVDVSSEAEHMAKRIADLHFEVKKHLERANASYKQSTDSHRWFKEFQVGDLLMVHLRKFW

Query:  LPTGYHNKLTNRKLGPFSILERIGDNAYRIDLPSTFLINNTFNVADLYSYFVLDDFTLQ
         PTG +NKL ++K+G   IL++I DNAY+ID P+   I+NTFNV D++ YF  ++F+LQ
Subjt:  LPTGYHNKLTNRKLGPFSILERIGDNAYRIDLPSTFLINNTFNVADLYSYFVLDDFTLQ

TYJ99684.1 serine/threonine-protein kinase TIO-like [Cucumis melo var. makuwa]9.3e-3853.75Show/hide
Query:  LQLTQAEFAFNHMKNKCTGKSPFEVVYTHLPRVTFDLVNLPTIVDVSSEAEHMAKRIADLHFEVKKHLERANASYKQSTDSHRWFKEFQVGDLLMVHLRK
        L L QAEFAFN+MKN+ TGK PF++VYT  PR+T DL +LPT V++  EAE M   I  LH EV  HL +   SYK+S D  R   EF  GDL+M+HLRK
Subjt:  LQLTQAEFAFNHMKNKCTGKSPFEVVYTHLPRVTFDLVNLPTIVDVSSEAEHMAKRIADLHFEVKKHLERANASYKQSTDSHRWFKEFQVGDLLMVHLRK

Query:  FWLPTGYHNKLTNRKLGPFSILERIGDNAYRIDLPSTFLINNTFNVADLYSYFVLDDFTL
           PTG +NKL ++++GPF ILE+ GDNA++I LP    I+  FNVADL  Y   D F L
Subjt:  FWLPTGYHNKLTNRKLGPFSILERIGDNAYRIDLPSTFLINNTFNVADLYSYFVLDDFTL

TrEMBL top hitse value%identityAlignment
A0A438BTT5 Transposon Ty3-G Gag-Pol polyprotein2.9e-3752.2Show/hide
Query:  LTQAEFAFNHMKNKCTGKSPFEVVYTHLPRVTFDLVNLPTIVDVSSEAEHMAKRIADLHFEVKKHLERANASYKQSTDSHRWFKEFQVGDLLMVHLRKFW
        L Q EFAFN M N+ T K+PFEVVYT +PR T DL+ LP    V+  AE  A+RI  +H EVKK+LE AN  YK + + HR  K F  GDL++VH RK  
Subjt:  LTQAEFAFNHMKNKCTGKSPFEVVYTHLPRVTFDLVNLPTIVDVSSEAEHMAKRIADLHFEVKKHLERANASYKQSTDSHRWFKEFQVGDLLMVHLRKFW

Query:  LPTGYHNKLTNRKLGPFSILERIGDNAYRIDLPSTFLINNTFNVADLYSYFVLDDFTLQ
         PTG +NKL ++K+G   IL++I DNAY+ID P+   I+NTFNV D++ YF  ++F+LQ
Subjt:  LPTGYHNKLTNRKLGPFSILERIGDNAYRIDLPSTFLINNTFNVADLYSYFVLDDFTLQ

A0A5A7UHK1 DNA/RNA polymerases superfamily protein1.1e-3652.5Show/hide
Query:  LQLTQAEFAFNHMKNKCTGKSPFEVVYTHLPRVTFDLVNLPTIVDVSSEAEHMAKRIADLHFEVKKHLERANASYKQSTDSHRWFKEFQVGDLLMVHLRK
        L L QAEFAFN+MKN+ TG+ PF++VYT  PR+T DL +LPT V++  EAE M   I  LH EV  HL +   SYK+S D  R   EF  GDL+M+HLRK
Subjt:  LQLTQAEFAFNHMKNKCTGKSPFEVVYTHLPRVTFDLVNLPTIVDVSSEAEHMAKRIADLHFEVKKHLERANASYKQSTDSHRWFKEFQVGDLLMVHLRK

Query:  FWLPTGYHNKLTNRKLGPFSILERIGDNAYRIDLPSTFLINNTFNVADLYSYFVLDDFTL
           PTG +NKL ++++ PF ILE+ GDNA++I LP    I+  FNVADL  Y   D F L
Subjt:  FWLPTGYHNKLTNRKLGPFSILERIGDNAYRIDLPSTFLINNTFNVADLYSYFVLDDFTL

A0A5D3BKX9 Serine/threonine-protein kinase TIO-like4.5e-3853.75Show/hide
Query:  LQLTQAEFAFNHMKNKCTGKSPFEVVYTHLPRVTFDLVNLPTIVDVSSEAEHMAKRIADLHFEVKKHLERANASYKQSTDSHRWFKEFQVGDLLMVHLRK
        L L QAEFAFN+MKN+ TGK PF++VYT  PR+T DL +LPT V++  EAE M   I  LH EV  HL +   SYK+S D  R   EF  GDL+M+HLRK
Subjt:  LQLTQAEFAFNHMKNKCTGKSPFEVVYTHLPRVTFDLVNLPTIVDVSSEAEHMAKRIADLHFEVKKHLERANASYKQSTDSHRWFKEFQVGDLLMVHLRK

Query:  FWLPTGYHNKLTNRKLGPFSILERIGDNAYRIDLPSTFLINNTFNVADLYSYFVLDDFTL
           PTG +NKL ++++GPF ILE+ GDNA++I LP    I+  FNVADL  Y   D F L
Subjt:  FWLPTGYHNKLTNRKLGPFSILERIGDNAYRIDLPSTFLINNTFNVADLYSYFVLDDFTL

A0A5D3E798 Transposon Ty3-G Gag-Pol polyprotein2.2e-3756.08Show/hide
Query:  MKNKCTGKSPFEVVYTHLPRVTFDLVNLPTIVDVSSEAEHMAKRIADLHFEVKKHLERANASYKQSTDSHRWFKEFQVGDLLMVHLRKFWLPTGYHNKLT
        M N+ T KSPFEVVYT LPRVTF L +LP+ VDVS EA+ M   I  LH EVK HLE AN SYK +T++H+  KE+QVGDL+MV+L K   P+ +H+K+T
Subjt:  MKNKCTGKSPFEVVYTHLPRVTFDLVNLPTIVDVSSEAEHMAKRIADLHFEVKKHLERANASYKQSTDSHRWFKEFQVGDLLMVHLRKFWLPTGYHNKLT

Query:  NRKLGPFSILERIGDNAYRIDLPSTFLINNTFNVADLYSYFVLDDFTL
        N+ + PF ILER+  NAYR+DL +  +IN +FN++DL  Y  LD F+L
Subjt:  NRKLGPFSILERIGDNAYRIDLPSTFLINNTFNVADLYSYFVLDDFTL

A5C365 Integrase_H2C2 domain-containing protein2.5e-3652.2Show/hide
Query:  LTQAEFAFNHMKNKCTGKSPFEVVYTHLPRVTFDLVNLPTIVDVSSEAEHMAKRIADLHFEVKKHLERANASYKQSTDSHRWFKEFQVGDLLMVHLRKFW
        L Q EFAFN M N+ T K+PFEVVYT +PR   DL+ LP   DV+  AE  A+RI  +H EVKK+LE+ N  YK   D H+  K F  GDL+MV+LRK  
Subjt:  LTQAEFAFNHMKNKCTGKSPFEVVYTHLPRVTFDLVNLPTIVDVSSEAEHMAKRIADLHFEVKKHLERANASYKQSTDSHRWFKEFQVGDLLMVHLRKFW

Query:  LPTGYHNKLTNRKLGPFSILERIGDNAYRIDLPSTFLINNTFNVADLYSYFVLDDFTLQ
         PT  +N     K+GPF +L++IGDNAY+IDL +   I+NTFNV D++ YF  D+F+LQ
Subjt:  LPTGYHNKLTNRKLGPFSILERIGDNAYRIDLPSTFLINNTFNVADLYSYFVLDDFTLQ

SwissProt top hitse value%identityAlignment
P0CT34 Transposon Tf2-1 polyprotein5.0e-1031.33Show/hide
Query:  AFNHMKNKCTGKSPFEVVYTHLPRVTFDLVNLPTIVDVSSEAEHMAKRIADLHFEVKKHLERANASYKQSTDSH-RWFKEFQVGDLLMVHLRKFWLPTGY
        ++N+  +  T  +PFE+V+ + P ++   + LP+  D + E    ++    +   VK+HL   N   K+  D   +  +EFQ GDL+MV   K    TG+
Subjt:  AFNHMKNKCTGKSPFEVVYTHLPRVTFDLVNLPTIVDVSSEAEHMAKRIADLHFEVKKHLERANASYKQSTDSH-RWFKEFQVGDLLMVHLRKFWLPTGY

Query:  ---HNKLTNRKLGPFSILERIGDNAYRIDLPSTF--LINNTFNVADLYSY
            NKL     GPF +L++ G N Y +DLP +   + ++TF+V+ L  Y
Subjt:  ---HNKLTNRKLGPFSILERIGDNAYRIDLPSTF--LINNTFNVADLYSY

P0CT41 Transposon Tf2-12 polyprotein5.0e-1031.33Show/hide
Query:  AFNHMKNKCTGKSPFEVVYTHLPRVTFDLVNLPTIVDVSSEAEHMAKRIADLHFEVKKHLERANASYKQSTDSH-RWFKEFQVGDLLMVHLRKFWLPTGY
        ++N+  +  T  +PFE+V+ + P ++   + LP+  D + E    ++    +   VK+HL   N   K+  D   +  +EFQ GDL+MV   K    TG+
Subjt:  AFNHMKNKCTGKSPFEVVYTHLPRVTFDLVNLPTIVDVSSEAEHMAKRIADLHFEVKKHLERANASYKQSTDSH-RWFKEFQVGDLLMVHLRKFWLPTGY

Query:  ---HNKLTNRKLGPFSILERIGDNAYRIDLPSTF--LINNTFNVADLYSY
            NKL     GPF +L++ G N Y +DLP +   + ++TF+V+ L  Y
Subjt:  ---HNKLTNRKLGPFSILERIGDNAYRIDLPSTF--LINNTFNVADLYSY

Q7LHG5 Transposon Ty3-I Gag-Pol polyprotein3.5e-1129.94Show/hide
Query:  LTQAEFAFNHMKNKCTGKSPFEVVYTHLPRVTFDLVNLPTIVDVSSEAEHMAKRIADLHFEVKKHLERANASYKQSTDSHRWFKEFQVGDLLMVHLRKFW
        L Q EF +N    +  GKSPFE+   +LP  T  + +   +   S  A  +AK +  L  + K+ LE A    + + +  R      +GD ++VH R  +
Subjt:  LTQAEFAFNHMKNKCTGKSPFEVVYTHLPRVTFDLVNLPTIVDVSSEAEHMAKRIADLHFEVKKHLERANASYKQSTDSHRWFKEFQVGDLLMVHLRKFW

Query:  LPTGYHNKLTNRKLGPFSILERIGDNAYRIDLPSTFLINNTFNVADLYSYFVLDDFT
           G + K+    +GPF ++++I DNAY +DL S    +   NV  L S + +   T
Subjt:  LPTGYHNKLTNRKLGPFSILERIGDNAYRIDLPSTFLINNTFNVADLYSYFVLDDFT

Q99315 Transposon Ty3-G Gag-Pol polyprotein7.7e-1129.68Show/hide
Query:  LTQAEFAFNHMKNKCTGKSPFEVVYTHLPRVTFDLVNLPTIVDVSSEAEHMAKRIADLHFEVKKHLERANASYKQSTDSHRWFKEFQVGDLLMVHLRKFW
        L Q EF +N    +  GKSPFE+   +LP  T  + +   +   S  A  +AK +  L  + K+ LE A    + + +  R      +GD ++VH R  +
Subjt:  LTQAEFAFNHMKNKCTGKSPFEVVYTHLPRVTFDLVNLPTIVDVSSEAEHMAKRIADLHFEVKKHLERANASYKQSTDSHRWFKEFQVGDLLMVHLRKFW

Query:  LPTGYHNKLTNRKLGPFSILERIGDNAYRIDLPSTFLINNTFNVADLYSYFVLDD
           G + K+    +GPF ++++I DNAY +DL S    +   NV  L  +    D
Subjt:  LPTGYHNKLTNRKLGPFSILERIGDNAYRIDLPSTFLINNTFNVADLYSYFVLDD

Q9UR07 Transposon Tf2-11 polyprotein5.0e-1031.33Show/hide
Query:  AFNHMKNKCTGKSPFEVVYTHLPRVTFDLVNLPTIVDVSSEAEHMAKRIADLHFEVKKHLERANASYKQSTDSH-RWFKEFQVGDLLMVHLRKFWLPTGY
        ++N+  +  T  +PFE+V+ + P ++   + LP+  D + E    ++    +   VK+HL   N   K+  D   +  +EFQ GDL+MV   K    TG+
Subjt:  AFNHMKNKCTGKSPFEVVYTHLPRVTFDLVNLPTIVDVSSEAEHMAKRIADLHFEVKKHLERANASYKQSTDSH-RWFKEFQVGDLLMVHLRKFWLPTGY

Query:  ---HNKLTNRKLGPFSILERIGDNAYRIDLPSTF--LINNTFNVADLYSY
            NKL     GPF +L++ G N Y +DLP +   + ++TF+V+ L  Y
Subjt:  ---HNKLTNRKLGPFSILERIGDNAYRIDLPSTF--LINNTFNVADLYSY

Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTCTCCAATTGACTCAAGCCGAATTTGCCTTCAACCACATGAAGAATAAGTGCACAGGGAAGTCTCCCTTTGAGGTTGTTTACACTCATCTACCTCGTGTTACTTT
TGACTTAGTTAACCTACCTACTATTGTTGATGTTAGTTCCGAGGCTGAGCACATGGCAAAGAGGATTGCTGATTTACATTTTGAAGTTAAGAAACACCTGGAGCGGGCTA
ATGCTTCATACAAACAATCAACTGATTCTCATCGATGGTTTAAGGAGTTTCAAGTGGGTGATTTATTGATGGTTCACCTTCGCAAGTTCTGGCTACCAACTGGTTATCAC
AACAAATTAACAAACAGAAAGCTCGGTCCATTTTCTATTTTGGAGCGCATTGGAGATAACGCCTATCGCATTGATCTTCCTTCTACTTTTCTCATCAACAACACCTTTAA
TGTAGCTGATTTATACTCTTACTTTGTTCTAGATGATTTTACTCTTCAAGCATAA
mRNA sequenceShow/hide mRNA sequence
ATGGGTCTCCAATTGACTCAAGCCGAATTTGCCTTCAACCACATGAAGAATAAGTGCACAGGGAAGTCTCCCTTTGAGGTTGTTTACACTCATCTACCTCGTGTTACTTT
TGACTTAGTTAACCTACCTACTATTGTTGATGTTAGTTCCGAGGCTGAGCACATGGCAAAGAGGATTGCTGATTTACATTTTGAAGTTAAGAAACACCTGGAGCGGGCTA
ATGCTTCATACAAACAATCAACTGATTCTCATCGATGGTTTAAGGAGTTTCAAGTGGGTGATTTATTGATGGTTCACCTTCGCAAGTTCTGGCTACCAACTGGTTATCAC
AACAAATTAACAAACAGAAAGCTCGGTCCATTTTCTATTTTGGAGCGCATTGGAGATAACGCCTATCGCATTGATCTTCCTTCTACTTTTCTCATCAACAACACCTTTAA
TGTAGCTGATTTATACTCTTACTTTGTTCTAGATGATTTTACTCTTCAAGCATAA
Protein sequenceShow/hide protein sequence
MGLQLTQAEFAFNHMKNKCTGKSPFEVVYTHLPRVTFDLVNLPTIVDVSSEAEHMAKRIADLHFEVKKHLERANASYKQSTDSHRWFKEFQVGDLLMVHLRKFWLPTGYH
NKLTNRKLGPFSILERIGDNAYRIDLPSTFLINNTFNVADLYSYFVLDDFTLQA