; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0032478 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0032478
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionTumor necrosis factor receptor family protein
Genome locationchr11:33065879..33073693
RNA-Seq ExpressionLag0032478
SyntenyLag0032478
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7035535.1 hypothetical protein SDJN02_02332 [Cucurbita argyrosperma subsp. argyrosperma]2.6e-6484.97Show/hide
Query:  WLRSIQRIGNADGGGGSAGLVFSTFARYFSRTRAENLRKINPKLTPQEASLVAQDLYGVVKQHGPLSVSNAWIKAQESGVSGLNSKTHMKLLLKWMRGRK
        WLR IQ I NADGGGGSAGLVFSTFARYFSR+RAENLRKINPKLTPQEASLVAQDLYGVVKQHGPL+VSNAWIKAQESGV GLNSKTHMKLLLKWMRGRK
Subjt:  WLRSIQRIGNADGGGGSAGLVFSTFARYFSRTRAENLRKINPKLTPQEASLVAQDLYGVVKQHGPLSVSNAWIKAQESGVSGLNSKTHMKLLLKWMRGRK

Query:  MLKLFCTQVGSNKKFLLSTPDDPQAEQLKNSSELAVQRQKRQKSPTRRRKPSK
        ML+LFC QVGSNKKFLL+TP+DP+ E+LK++SE  VQR+K+QK+  RRRK SK
Subjt:  MLKLFCTQVGSNKKFLLSTPDDPQAEQLKNSSELAVQRQKRQKSPTRRRKPSK

XP_004145885.1 uncharacterized protein LOC101211684 [Cucumis sativus]1.0e-6585.71Show/hide
Query:  MWLRSIQRIGNADGGGGSAGLVFSTFARYFSRTRAENLRKINPKLTPQEASLVAQDLYGVVKQHGPLSVSNAWIKAQESGVSGLNSKTHMKLLLKWMRGR
        MW RSIQRIGNADGGGG AGLVF+TFAR+FSR RAENLRKINPKLTPQEASLVAQDLYGVV+QHGPL++SNAWIKAQESGV+GLNSKTHMKLLLKWMRGR
Subjt:  MWLRSIQRIGNADGGGGSAGLVFSTFARYFSRTRAENLRKINPKLTPQEASLVAQDLYGVVKQHGPLSVSNAWIKAQESGVSGLNSKTHMKLLLKWMRGR

Query:  KMLKLFCTQVGSNKKFLLSTPDDPQAEQLKNSSELAVQRQKRQKSPTRRRKPSK
        KML LFC  VGSNKKFLL TPDDP+AE+LKNSSE   QR+KR KSPT+RRK SK
Subjt:  KMLKLFCTQVGSNKKFLLSTPDDPQAEQLKNSSELAVQRQKRQKSPTRRRKPSK

XP_022159821.1 uncharacterized protein LOC111026127 [Momordica charantia]6.5e-6889.03Show/hide
Query:  MWLRSIQRIGNADGGGGSAGLVFSTFARYFSRTRAENLRKINPKLTPQEASLVAQDLYGVVKQHGPLSVSNAWIKAQESGVSGLNSKTHMKLLLKWMRGR
        MWLR  QRIG+ADGGGGSAGLVFSTFARYFSR RAENLRKINPKLTPQEASLVAQDLYGVVKQHGPLS+SNAWIKAQE GVSGLNSKTHMKL+LKWMRGR
Subjt:  MWLRSIQRIGNADGGGGSAGLVFSTFARYFSRTRAENLRKINPKLTPQEASLVAQDLYGVVKQHGPLSVSNAWIKAQESGVSGLNSKTHMKLLLKWMRGR

Query:  KMLKLFCTQVGSNKKFLLST-PDDPQAEQLKNSSELAVQRQKRQKSPTRRRKPSK
        KMLKL C QVGSNKKFLLST PDDPQA+QLK+SSEL VQR+KR K P RRRKPSK
Subjt:  KMLKLFCTQVGSNKKFLLST-PDDPQAEQLKNSSELAVQRQKRQKSPTRRRKPSK

XP_022958708.1 uncharacterized protein LOC111459852 [Cucurbita moschata]6.7e-6585.62Show/hide
Query:  WLRSIQRIGNADGGGGSAGLVFSTFARYFSRTRAENLRKINPKLTPQEASLVAQDLYGVVKQHGPLSVSNAWIKAQESGVSGLNSKTHMKLLLKWMRGRK
        WLR IQ I NADGGGGSAGLVFSTF RYFSR+RAENLRKINPKLTPQEASLVAQDLYGVVKQHGPL+VSNAWIKAQESGV GLNSKTHMKLLLKWMRGRK
Subjt:  WLRSIQRIGNADGGGGSAGLVFSTFARYFSRTRAENLRKINPKLTPQEASLVAQDLYGVVKQHGPLSVSNAWIKAQESGVSGLNSKTHMKLLLKWMRGRK

Query:  MLKLFCTQVGSNKKFLLSTPDDPQAEQLKNSSELAVQRQKRQKSPTRRRKPSK
        ML+LFC QVGSNKKFLL+TPDDP+AE+LK++SE  VQR+K+QK+  RRRK SK
Subjt:  MLKLFCTQVGSNKKFLLSTPDDPQAEQLKNSSELAVQRQKRQKSPTRRRKPSK

XP_038876162.1 uncharacterized protein LOC120068455 [Benincasa hispida]4.5e-6990.26Show/hide
Query:  MWLRSIQRIGNADGGGGSAGLVFSTFARYFSRTRAENLRKINPKLTPQEASLVAQDLYGVVKQHGPLSVSNAWIKAQESGVSGLNSKTHMKLLLKWMRGR
        MWLRSIQRIGNADGGGGSAGLVFSTFARYFSR RAENLRKINPKLTPQEASLVAQDLYGVVKQHGPL+VSNAWIKAQESGV+GLNSKTHMKLLLKWMRGR
Subjt:  MWLRSIQRIGNADGGGGSAGLVFSTFARYFSRTRAENLRKINPKLTPQEASLVAQDLYGVVKQHGPLSVSNAWIKAQESGVSGLNSKTHMKLLLKWMRGR

Query:  KMLKLFCTQVGSNKKFLLSTPDDPQAEQLKNSSELAVQRQKRQKSPTRRRKPSK
        KML LFC QVGSNKKFLL TPDDP+AEQLK+SSE  VQR+KR KSP +RRK SK
Subjt:  KMLKLFCTQVGSNKKFLLSTPDDPQAEQLKNSSELAVQRQKRQKSPTRRRKPSK

TrEMBL top hitse value%identityAlignment
A0A0A0KK52 Uncharacterized protein5.0e-6685.71Show/hide
Query:  MWLRSIQRIGNADGGGGSAGLVFSTFARYFSRTRAENLRKINPKLTPQEASLVAQDLYGVVKQHGPLSVSNAWIKAQESGVSGLNSKTHMKLLLKWMRGR
        MW RSIQRIGNADGGGG AGLVF+TFAR+FSR RAENLRKINPKLTPQEASLVAQDLYGVV+QHGPL++SNAWIKAQESGV+GLNSKTHMKLLLKWMRGR
Subjt:  MWLRSIQRIGNADGGGGSAGLVFSTFARYFSRTRAENLRKINPKLTPQEASLVAQDLYGVVKQHGPLSVSNAWIKAQESGVSGLNSKTHMKLLLKWMRGR

Query:  KMLKLFCTQVGSNKKFLLSTPDDPQAEQLKNSSELAVQRQKRQKSPTRRRKPSK
        KML LFC  VGSNKKFLL TPDDP+AE+LKNSSE   QR+KR KSPT+RRK SK
Subjt:  KMLKLFCTQVGSNKKFLLSTPDDPQAEQLKNSSELAVQRQKRQKSPTRRRKPSK

A0A1S3ATS9 uncharacterized protein LOC1034828888.0e-6483.12Show/hide
Query:  MWLRSIQRIGNADGGGGSAGLVFSTFARYFSRTRAENLRKINPKLTPQEASLVAQDLYGVVKQHGPLSVSNAWIKAQESGVSGLNSKTHMKLLLKWMRGR
        MW RSIQRIGN DGGGG  GLVF+TFAR+FSR RAENLRKINPKLTPQEASLVAQDLYGV++QHGPL+VSNAWIKAQESGV+GLNSKTHMKLLLKWMRGR
Subjt:  MWLRSIQRIGNADGGGGSAGLVFSTFARYFSRTRAENLRKINPKLTPQEASLVAQDLYGVVKQHGPLSVSNAWIKAQESGVSGLNSKTHMKLLLKWMRGR

Query:  KMLKLFCTQVGSNKKFLLSTPDDPQAEQLKNSSELAVQRQKRQKSPTRRRKPSK
        +ML LFC  VGSNKKFLL TPDDP+AE+LKN SE   QR+KR KSPT+RRK SK
Subjt:  KMLKLFCTQVGSNKKFLLSTPDDPQAEQLKNSSELAVQRQKRQKSPTRRRKPSK

A0A6J1E538 uncharacterized protein LOC1110261273.2e-6889.03Show/hide
Query:  MWLRSIQRIGNADGGGGSAGLVFSTFARYFSRTRAENLRKINPKLTPQEASLVAQDLYGVVKQHGPLSVSNAWIKAQESGVSGLNSKTHMKLLLKWMRGR
        MWLR  QRIG+ADGGGGSAGLVFSTFARYFSR RAENLRKINPKLTPQEASLVAQDLYGVVKQHGPLS+SNAWIKAQE GVSGLNSKTHMKL+LKWMRGR
Subjt:  MWLRSIQRIGNADGGGGSAGLVFSTFARYFSRTRAENLRKINPKLTPQEASLVAQDLYGVVKQHGPLSVSNAWIKAQESGVSGLNSKTHMKLLLKWMRGR

Query:  KMLKLFCTQVGSNKKFLLST-PDDPQAEQLKNSSELAVQRQKRQKSPTRRRKPSK
        KMLKL C QVGSNKKFLLST PDDPQA+QLK+SSEL VQR+KR K P RRRKPSK
Subjt:  KMLKLFCTQVGSNKKFLLST-PDDPQAEQLKNSSELAVQRQKRQKSPTRRRKPSK

A0A6J1H3U5 uncharacterized protein LOC1114598523.3e-6585.62Show/hide
Query:  WLRSIQRIGNADGGGGSAGLVFSTFARYFSRTRAENLRKINPKLTPQEASLVAQDLYGVVKQHGPLSVSNAWIKAQESGVSGLNSKTHMKLLLKWMRGRK
        WLR IQ I NADGGGGSAGLVFSTF RYFSR+RAENLRKINPKLTPQEASLVAQDLYGVVKQHGPL+VSNAWIKAQESGV GLNSKTHMKLLLKWMRGRK
Subjt:  WLRSIQRIGNADGGGGSAGLVFSTFARYFSRTRAENLRKINPKLTPQEASLVAQDLYGVVKQHGPLSVSNAWIKAQESGVSGLNSKTHMKLLLKWMRGRK

Query:  MLKLFCTQVGSNKKFLLSTPDDPQAEQLKNSSELAVQRQKRQKSPTRRRKPSK
        ML+LFC QVGSNKKFLL+TPDDP+AE+LK++SE  VQR+K+QK+  RRRK SK
Subjt:  MLKLFCTQVGSNKKFLLSTPDDPQAEQLKNSSELAVQRQKRQKSPTRRRKPSK

A0A6J1K817 uncharacterized protein LOC1114914951.2e-6484.97Show/hide
Query:  WLRSIQRIGNADGGGGSAGLVFSTFARYFSRTRAENLRKINPKLTPQEASLVAQDLYGVVKQHGPLSVSNAWIKAQESGVSGLNSKTHMKLLLKWMRGRK
        WLR IQ I NADGGGGSAGLVFSTFARYFSR+RAENLRKINPKLTPQEASLVAQDLYGVVKQHGPL+VSNAWIKAQESGV GLNSKTHMKLLLKWMRGRK
Subjt:  WLRSIQRIGNADGGGGSAGLVFSTFARYFSRTRAENLRKINPKLTPQEASLVAQDLYGVVKQHGPLSVSNAWIKAQESGVSGLNSKTHMKLLLKWMRGRK

Query:  MLKLFCTQVGSNKKFLLSTPDDPQAEQLKNSSELAVQRQKRQKSPTRRRKPSK
        ML+LFC QVGSNKKFLL+TP+DP+AE+LK++SE  VQR+K+QK+  RR+K SK
Subjt:  MLKLFCTQVGSNKKFLLSTPDDPQAEQLKNSSELAVQRQKRQKSPTRRRKPSK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G73940.1 unknown protein7.3e-3354.42Show/hide
Query:  ADGGGG-----SAGLVF-------STFARYFSRTRAENLRKINPKLTPQEASLVAQDLYGVVKQHGPLSVSNAWIKAQESGVSGLNSKTHMKLLLKWMRG
        A GGGG      A  +F       S   RY SR RA N+RKINPK+  QEA  ++  LY + K HGPLSV N W++AQE+GVSGLNSKTHMKLLLKWMRG
Subjt:  ADGGGG-----SAGLVF-------STFARYFSRTRAENLRKINPKLTPQEASLVAQDLYGVVKQHGPLSVSNAWIKAQESGVSGLNSKTHMKLLLKWMRG

Query:  RKMLKLFCTQVGSNKKFLLST-PDDPQAEQLKNSSELAVQRQKRQKS
        +KMLKL C QVGS+KKF  +  P+DP  EQ     E   Q  K+++S
Subjt:  RKMLKLFCTQVGSNKKFLLST-PDDPQAEQLKNSSELAVQRQKRQKS

AT5G49410.1 unknown protein7.3e-1735.35Show/hide
Query:  VFSTFARYFSRTRAENLRKINPKLTPQEASLVAQDLYGVVKQHGPLSVSNAWIKAQESGVSGLNSKTHMKLLLKWMRGRKMLKLFCTQVGSNKKFLLST
        V     R+F+      ++ I     P++   + + ++ ++K HGPL+++  W + +E G+ GL SK HMK++L+WMR R+ LKL C  VG +K+FL +T
Subjt:  VFSTFARYFSRTRAENLRKINPKLTPQEASLVAQDLYGVVKQHGPLSVSNAWIKAQESGVSGLNSKTHMKLLLKWMRGRKMLKLFCTQVGSNKKFLLST

AT5G49410.2 unknown protein7.3e-1735.35Show/hide
Query:  VFSTFARYFSRTRAENLRKINPKLTPQEASLVAQDLYGVVKQHGPLSVSNAWIKAQESGVSGLNSKTHMKLLLKWMRGRKMLKLFCTQVGSNKKFLLST
        V     R+F+      ++ I     P++   + + ++ ++K HGPL+++  W + +E G+ GL SK HMK++L+WMR R+ LKL C  VG +K+FL +T
Subjt:  VFSTFARYFSRTRAENLRKINPKLTPQEASLVAQDLYGVVKQHGPLSVSNAWIKAQESGVSGLNSKTHMKLLLKWMRGRKMLKLFCTQVGSNKKFLLST


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGATGTCGATGGAAATGTCGAGGTCCAGATTTTATGGAAATGTCGATGTCGATGGAAATGTCGAGTGTCTTGGCGGCAGCGGCATACCAGTGCGACGGCGGCGTAG
TAGTAGCCACAGGCGAACAGTGCTAGAATTCTGTGCCACAAAATACTGCGGTAGATTAGGTATGTGGCTTCGCAGTATCCAAAGAATTGGAAATGCTGATGGAGGTGGAG
GTTCTGCTGGCCTTGTTTTCAGCACATTTGCGAGATATTTCTCGAGGACGCGAGCAGAGAATCTTAGGAAGATCAATCCCAAGTTGACGCCTCAGGAAGCTTCTTTGGTT
GCTCAAGATCTCTATGGTGTCGTCAAGCAGCATGGTCCTCTCAGCGTTTCTAATGCTTGGATTAAAGCCCAGGAATCTGGCGTGAGTGGATTGAACAGCAAAACACACAT
GAAACTATTGCTGAAATGGATGAGAGGAAGGAAGATGCTGAAGCTCTTCTGCACCCAAGTTGGTTCCAACAAGAAATTTCTGCTTTCTACTCCCGATGATCCTCAGGCAG
AGCAGTTGAAGAATTCTTCAGAATTAGCAGTCCAGAGACAGAAGAGACAGAAGTCACCAACAAGGAGAAGAAAGCCATCAAAATAG
mRNA sequenceShow/hide mRNA sequence
ATGTCGATGTCGATGGAAATGTCGAGGTCCAGATTTTATGGAAATGTCGATGTCGATGGAAATGTCGAGTGTCTTGGCGGCAGCGGCATACCAGTGCGACGGCGGCGTAG
TAGTAGCCACAGGCGAACAGTGCTAGAATTCTGTGCCACAAAATACTGCGGTAGATTAGGTATGTGGCTTCGCAGTATCCAAAGAATTGGAAATGCTGATGGAGGTGGAG
GTTCTGCTGGCCTTGTTTTCAGCACATTTGCGAGATATTTCTCGAGGACGCGAGCAGAGAATCTTAGGAAGATCAATCCCAAGTTGACGCCTCAGGAAGCTTCTTTGGTT
GCTCAAGATCTCTATGGTGTCGTCAAGCAGCATGGTCCTCTCAGCGTTTCTAATGCTTGGATTAAAGCCCAGGAATCTGGCGTGAGTGGATTGAACAGCAAAACACACAT
GAAACTATTGCTGAAATGGATGAGAGGAAGGAAGATGCTGAAGCTCTTCTGCACCCAAGTTGGTTCCAACAAGAAATTTCTGCTTTCTACTCCCGATGATCCTCAGGCAG
AGCAGTTGAAGAATTCTTCAGAATTAGCAGTCCAGAGACAGAAGAGACAGAAGTCACCAACAAGGAGAAGAAAGCCATCAAAATAG
Protein sequenceShow/hide protein sequence
MSMSMEMSRSRFYGNVDVDGNVECLGGSGIPVRRRRSSSHRRTVLEFCATKYCGRLGMWLRSIQRIGNADGGGGSAGLVFSTFARYFSRTRAENLRKINPKLTPQEASLV
AQDLYGVVKQHGPLSVSNAWIKAQESGVSGLNSKTHMKLLLKWMRGRKMLKLFCTQVGSNKKFLLSTPDDPQAEQLKNSSELAVQRQKRQKSPTRRRKPSK