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Lag0032492 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0032492
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionGlycine--tRNA ligase beta subunit
Genome locationchr11:33485634..33488610
RNA-Seq ExpressionLag0032492
SyntenyLag0032492
Gene Ontology termsGO:0016874 - ligase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7017064.1 hypothetical protein SDJN02_22176, partial [Cucurbita argyrosperma subsp. argyrosperma]1.5e-1590.38Show/hide
Query:  MMLVSVVAELLEEYTVLLAEVLRQLFHSAPFPRRVRFLILHNLPFADNSSSA
        MMLVSV+AE+LEEYTVLL EVLRQLFHSAPFPRRVRFLILHNLPFA+NSSS+
Subjt:  MMLVSVVAELLEEYTVLLAEVLRQLFHSAPFPRRVRFLILHNLPFADNSSSA

XP_022159655.1 uncharacterized protein LOC111025999 [Momordica charantia]2.0e-1585.96Show/hide
Query:  MMLVSVVAELLEEYTVLLAEVLRQLFHSAPFPRRVRFLILHNLPFADNSSSARPLIR
        MMLVSVVAELLEEYTVLLAEVLRQLF+SAPFPRRVRFLILHNLP  +NS+S+ PL R
Subjt:  MMLVSVVAELLEEYTVLLAEVLRQLFHSAPFPRRVRFLILHNLPFADNSSSARPLIR

XP_022928978.1 uncharacterized protein LOC111435715 [Cucurbita moschata]1.5e-1590.38Show/hide
Query:  MMLVSVVAELLEEYTVLLAEVLRQLFHSAPFPRRVRFLILHNLPFADNSSSA
        MMLVSV+AE+LEEYTVLL EVLRQLFHSAPFPRRVRFLILHNLPFA+NSSS+
Subjt:  MMLVSVVAELLEEYTVLLAEVLRQLFHSAPFPRRVRFLILHNLPFADNSSSA

XP_022970120.1 uncharacterized protein LOC111469109 [Cucurbita maxima]1.5e-1590.38Show/hide
Query:  MMLVSVVAELLEEYTVLLAEVLRQLFHSAPFPRRVRFLILHNLPFADNSSSA
        MMLVSV+AE+LEEYTVLL EVLRQLFHSAPFPRRVRFLILHNLPFA+NSSS+
Subjt:  MMLVSVVAELLEEYTVLLAEVLRQLFHSAPFPRRVRFLILHNLPFADNSSSA

XP_023520510.1 uncharacterized protein LOC111783933 [Cucurbita pepo subsp. pepo]1.5e-1590.38Show/hide
Query:  MMLVSVVAELLEEYTVLLAEVLRQLFHSAPFPRRVRFLILHNLPFADNSSSA
        MMLVSV+AE+LEEYTVLL EVLRQLFHSAPFPRRVRFLILHNLPFA+NSSS+
Subjt:  MMLVSVVAELLEEYTVLLAEVLRQLFHSAPFPRRVRFLILHNLPFADNSSSA

TrEMBL top hitse value%identityAlignment
A0A1S3AUP0 uncharacterized protein LOC1034828834.4e-1380.39Show/hide
Query:  MMLVSVVAELLEEYTVLLAEVLRQLFHSAPFPRRVRFLILHNLPFADNSSS
        MMLVSV+AE+LEEYTV+L++VLRQLF+SAPFPRRVRFLILHNLPFAD  ++
Subjt:  MMLVSVVAELLEEYTVLLAEVLRQLFHSAPFPRRVRFLILHNLPFADNSSS

A0A2N9IEI9 Uncharacterized protein1.3e-1277.59Show/hide
Query:  MMLVSVVAELLEEYTVLLAEVLRQLFHSAPFPRRVRFLILHNLPFADNSSSARPLIRA
        M+LV++VAELLEEYTVLLA VL  LFHSAPFPRRVRFLIL +LPFA  S + RPLIRA
Subjt:  MMLVSVVAELLEEYTVLLAEVLRQLFHSAPFPRRVRFLILHNLPFADNSSSARPLIRA

A0A6J1DZC9 uncharacterized protein LOC1110259999.5e-1685.96Show/hide
Query:  MMLVSVVAELLEEYTVLLAEVLRQLFHSAPFPRRVRFLILHNLPFADNSSSARPLIR
        MMLVSVVAELLEEYTVLLAEVLRQLF+SAPFPRRVRFLILHNLP  +NS+S+ PL R
Subjt:  MMLVSVVAELLEEYTVLLAEVLRQLFHSAPFPRRVRFLILHNLPFADNSSSARPLIR

A0A6J1EQP1 uncharacterized protein LOC1114357157.3e-1690.38Show/hide
Query:  MMLVSVVAELLEEYTVLLAEVLRQLFHSAPFPRRVRFLILHNLPFADNSSSA
        MMLVSV+AE+LEEYTVLL EVLRQLFHSAPFPRRVRFLILHNLPFA+NSSS+
Subjt:  MMLVSVVAELLEEYTVLLAEVLRQLFHSAPFPRRVRFLILHNLPFADNSSSA

A0A6J1I1Z0 uncharacterized protein LOC1114691097.3e-1690.38Show/hide
Query:  MMLVSVVAELLEEYTVLLAEVLRQLFHSAPFPRRVRFLILHNLPFADNSSSA
        MMLVSV+AE+LEEYTVLL EVLRQLFHSAPFPRRVRFLILHNLPFA+NSSS+
Subjt:  MMLVSVVAELLEEYTVLLAEVLRQLFHSAPFPRRVRFLILHNLPFADNSSSA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G33055.1 unknown protein2.2e-0951.79Show/hide
Query:  MMLVSVVAELLEEYTVLLAEVLRQLFHSAPFPRRVRFLILHNLPFADNSSSARPLI
        M+LV+++AE+++EYTV+LA V+  LF  APFPRR+R  IL++LPF  +S+++ PL+
Subjt:  MMLVSVVAELLEEYTVLLAEVLRQLFHSAPFPRRVRFLILHNLPFADNSSSARPLI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGAAACCAGGGTCGCCCACGTGGAAATGTGACAAAGAGGGATTTAAAATACCTGCTCATGCTCCTAGAGTTGTTAGGAATTCGAAGGCGTTTCGGGAAGAACTAGG
CGGAACCGGGACGGCCAGAGGTTGCAGGGACCGAACGGAAGCGAACGAGCTAGGCCTGCGCAAGCGGGCCGAATGGTCGGCCGAGGCCGACCATAGCCCGACCCTTTGGT
CTGATCTTCTTTGGAGCCCTAATTTGACGCCGGAGATGATGCTCGTGTCGGTAGTGGCGGAGCTTCTGGAGGAGTACACGGTGCTGCTGGCGGAGGTGCTCCGGCAGCTC
TTCCATTCCGCGCCATTTCCTCGCCGAGTCCGATTTCTCATCCTTCACAATCTTCCTTTCGCCGATAACTCCTCCTCCGCCCGGCCCCTAATTCGCGCGGCGTAG
mRNA sequenceShow/hide mRNA sequence
ATGAAGAAACCAGGGTCGCCCACGTGGAAATGTGACAAAGAGGGATTTAAAATACCTGCTCATGCTCCTAGAGTTGTTAGGAATTCGAAGGCGTTTCGGGAAGAACTAGG
CGGAACCGGGACGGCCAGAGGTTGCAGGGACCGAACGGAAGCGAACGAGCTAGGCCTGCGCAAGCGGGCCGAATGGTCGGCCGAGGCCGACCATAGCCCGACCCTTTGGT
CTGATCTTCTTTGGAGCCCTAATTTGACGCCGGAGATGATGCTCGTGTCGGTAGTGGCGGAGCTTCTGGAGGAGTACACGGTGCTGCTGGCGGAGGTGCTCCGGCAGCTC
TTCCATTCCGCGCCATTTCCTCGCCGAGTCCGATTTCTCATCCTTCACAATCTTCCTTTCGCCGATAACTCCTCCTCCGCCCGGCCCCTAATTCGCGCGGCGTAG
Protein sequenceShow/hide protein sequence
MKKPGSPTWKCDKEGFKIPAHAPRVVRNSKAFREELGGTGTARGCRDRTEANELGLRKRAEWSAEADHSPTLWSDLLWSPNLTPEMMLVSVVAELLEEYTVLLAEVLRQL
FHSAPFPRRVRFLILHNLPFADNSSSARPLIRAA