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Lag0032510 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0032510
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRNase H domain-containing protein
Genome locationchr11:33781980..33782363
RNA-Seq ExpressionLag0032510
SyntenyLag0032510
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsIPR002156 - Ribonuclease H domain
IPR036397 - Ribonuclease H superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF7008908.1 hypothetical protein CFC21_023557 [Triticum aestivum]4.0e-0445.76Show/hide
Query:  LEVESDASELVKCIQGTSSDLSETGLIMRELKDFTA--GSNISFAFCPRSNNVLAHSLA
        ++VE D   LVK ++GT +DL+  GL+ RE++ F      N+SF+F PR+ N LAH+LA
Subjt:  LEVESDASELVKCIQGTSSDLSETGLIMRELKDFTA--GSNISFAFCPRSNNVLAHSLA

KAF8650267.1 hypothetical protein HU200_064026 [Digitaria exilis]5.2e-0435Show/hide
Query:  AMLEGLKAFQRMIVNLADRGDGIPLEVESDASELVKCIQGTSSDLSETGLIMRELKDFTA--GSNISFAFCPRSNNVLAHSLARLAVER---SNFVFLEP
        A+   + A  R +   +D+G    +EVESD + LV  +  +S DLS  G++ +E + F +    ++ F FCPRS+N  AH LAR  + R    + V+L+P
Subjt:  AMLEGLKAFQRMIVNLADRGDGIPLEVESDASELVKCIQGTSSDLSETGLIMRELKDFTA--GSNISFAFCPRSNNVLAHSLARLAVER---SNFVFLEP

XP_015387358.1 uncharacterized protein LOC107177672 [Citrus sinensis]8.9e-0429.46Show/hide
Query:  MGAGGKKMVRKWSIKSLEGFAMLEGLKAFQRMIVNLADRGDGIPLEVESDASELVKCIQGTSSDLSETGLIMRELKDFTAGSNI-SFAFCPRSNNVLAHS
        + A  KK+  + ++ S+E  A+L G++  Q++        + +P+ +ESD++E+V+ +    S L+E    + E+K     SN  S  + PR  NV+AH+
Subjt:  MGAGGKKMVRKWSIKSLEGFAMLEGLKAFQRMIVNLADRGDGIPLEVESDASELVKCIQGTSSDLSETGLIMRELKDFTAGSNI-SFAFCPRSNNVLAHS

Query:  LARLAVERSNFV
        +A++A++  N V
Subjt:  LARLAVERSNFV

TrEMBL top hitse value%identityAlignment
A0A3B6G1V0 RNase H domain-containing protein1.9e-0445.76Show/hide
Query:  LEVESDASELVKCIQGTSSDLSETGLIMRELKDFTA--GSNISFAFCPRSNNVLAHSLA
        ++VE D   LVK ++GT +DL+  GL+ RE++ F      N+SF+F PR+ N LAH+LA
Subjt:  LEVESDASELVKCIQGTSSDLSETGLIMRELKDFTA--GSNISFAFCPRSNNVLAHSLA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTGCTGGAGGCAAGAAGATGGTTAGGAAATGGTCAATCAAAAGCCTCGAAGGTTTTGCTATGCTCGAGGGGCTAAAAGCTTTCCAGAGGATGATCGTCAACCTTGC
CGATAGGGGCGATGGAATTCCGCTCGAAGTAGAATCTGATGCTTCGGAGCTTGTTAAATGCATCCAGGGAACATCTTCGGATCTCTCTGAGACGGGCCTGATCATGAGAG
AGTTGAAAGATTTCACTGCGGGATCGAACATCTCTTTCGCCTTTTGTCCTAGGAGCAACAATGTTCTTGCTCATTCGTTAGCGCGCTTGGCTGTAGAGCGGAGTAATTTC
GTTTTTTTGGAGCCCTCTGGTTTGTTCGATGGGGTTTTTTTTGGTAAGGGATGA
mRNA sequenceShow/hide mRNA sequence
ATGGGTGCTGGAGGCAAGAAGATGGTTAGGAAATGGTCAATCAAAAGCCTCGAAGGTTTTGCTATGCTCGAGGGGCTAAAAGCTTTCCAGAGGATGATCGTCAACCTTGC
CGATAGGGGCGATGGAATTCCGCTCGAAGTAGAATCTGATGCTTCGGAGCTTGTTAAATGCATCCAGGGAACATCTTCGGATCTCTCTGAGACGGGCCTGATCATGAGAG
AGTTGAAAGATTTCACTGCGGGATCGAACATCTCTTTCGCCTTTTGTCCTAGGAGCAACAATGTTCTTGCTCATTCGTTAGCGCGCTTGGCTGTAGAGCGGAGTAATTTC
GTTTTTTTGGAGCCCTCTGGTTTGTTCGATGGGGTTTTTTTTGGTAAGGGATGA
Protein sequenceShow/hide protein sequence
MGAGGKKMVRKWSIKSLEGFAMLEGLKAFQRMIVNLADRGDGIPLEVESDASELVKCIQGTSSDLSETGLIMRELKDFTAGSNISFAFCPRSNNVLAHSLARLAVERSNF
VFLEPSGLFDGVFFGKG