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Lag0032516 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0032516
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Descriptionzf-RVT domain-containing protein
Genome locationchr11:33921312..33922886
RNA-Seq ExpressionLag0032516
SyntenyLag0032516
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsIPR002156 - Ribonuclease H domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_021801570.1 uncharacterized protein LOC110745747 isoform X2 [Prunus avium]5.0e-1844.76Show/hide
Query:  LTGARSPSGSYFWHGFLWGRELLSMGLRKRIGDGSSTYFYTDPWLPRLATFKPIHAKLSGLLT-AEDFQIIQSIPIRRMKSEDVWLWHYDKHGIYSVKTG
        L   +  + SY W   +WGRELL  GLRK IGDG  T  Y D W+P   +F+PI  ++    T  ED + I SIP+     +D W+WHY  +G YSVK+G
Subjt:  LTGARSPSGSYFWHGFLWGRELLSMGLRKRIGDGSSTYFYTDPWLPRLATFKPIHAKLSGLLT-AEDFQIIQSIPIRRMKSEDVWLWHYDKHGIYSVKTG

Query:  YKLQM
        Y+L+M
Subjt:  YKLQM

XP_021801571.1 uncharacterized protein LOC110745747 isoform X3 [Prunus avium]1.5e-1744.23Show/hide
Query:  LTGARSPSGSYFWHGFLWGRELLSMGLRKRIGDGSSTYFYTDPWLPRLATFKPIHAKLSGLLTAEDFQIIQSIPIRRMKSEDVWLWHYDKHGIYSVKTGY
        L   +  + SY W   +WGRELL  GLRK IGDG  T  Y D W+P   +F+PI  +       ED + I SIP+     +D W+WHY  +G YSVK+GY
Subjt:  LTGARSPSGSYFWHGFLWGRELLSMGLRKRIGDGSSTYFYTDPWLPRLATFKPIHAKLSGLLTAEDFQIIQSIPIRRMKSEDVWLWHYDKHGIYSVKTGY

Query:  KLQM
        +L+M
Subjt:  KLQM

XP_022131662.1 uncharacterized protein LOC111004787 [Momordica charantia]5.5e-1738.02Show/hide
Query:  VLTGARSPSGSYFWHGFLWGRELLSMGLRKRIGDGSSTYFYTDPWLPRLATFKPIHAK----------------------LSGLLTAEDFQIIQSIPIRR
        VL      + SYFW GF+WGR+LL  GLR R+G+GS+   ++DPW+PR  +F+PI A                       +S +   ED  +I S+P+  
Subjt:  VLTGARSPSGSYFWHGFLWGRELLSMGLRKRIGDGSSTYFYTDPWLPRLATFKPIHAK----------------------LSGLLTAEDFQIIQSIPIRR

Query:  MKSEDVWLWHYDKHGIYSVKT
          S D W+WH+DK G Y+VK+
Subjt:  MKSEDVWLWHYDKHGIYSVKT

XP_022158377.1 uncharacterized protein LOC111024874 [Momordica charantia]5.7e-2243.18Show/hide
Query:  VLTGARSPSGSYFWHGFLWGRELLSMGLRKRIGDGSSTYFYTDPWLPRLATFKPIH-------AKLSGLLTA---------------EDFQIIQSIPIRR
        +L  + +   SYFW GFLWGR+LL  GLR R+G+GS+   ++DPWLPR  TFKP+          ++  +TA               ED  +I S+PI  
Subjt:  VLTGARSPSGSYFWHGFLWGRELLSMGLRKRIGDGSSTYFYTDPWLPRLATFKPIH-------AKLSGLLTA---------------EDFQIIQSIPIRR

Query:  MKSEDVWLWHYDKHGIYSVKTGYKLQMLHVVC
           +D WLWHYDK G YSV++GYKL M H+ C
Subjt:  MKSEDVWLWHYDKHGIYSVKTGYKLQMLHVVC

XP_030505522.1 uncharacterized protein LOC115720515 [Cannabis sativa]1.1e-1738.28Show/hide
Query:  PHGFVLTGARSPSGSYFWHGFLWGRELLSMGLRKRIGDGSSTYFYTDPWLPRLATFKPIHAKLSGLL---------------------TAEDFQIIQSIP
        P    L    S   S  W G +WG+ELL  GLR+RIG+G++T  + DPW+PR  +F PI  ++  L+                     +  D Q+I SIP
Subjt:  PHGFVLTGARSPSGSYFWHGFLWGRELLSMGLRKRIGDGSSTYFYTDPWLPRLATFKPIHAKLSGLL---------------------TAEDFQIIQSIP

Query:  IRRMKSEDVWLWHYDKHGIYSVKTGYKL
        I   + +D WLWH+  HG YSVK+GY L
Subjt:  IRRMKSEDVWLWHYDKHGIYSVKTGYKL

TrEMBL top hitse value%identityAlignment
A0A6J1DX30 uncharacterized protein LOC1110248742.8e-2243.18Show/hide
Query:  VLTGARSPSGSYFWHGFLWGRELLSMGLRKRIGDGSSTYFYTDPWLPRLATFKPIH-------AKLSGLLTA---------------EDFQIIQSIPIRR
        +L  + +   SYFW GFLWGR+LL  GLR R+G+GS+   ++DPWLPR  TFKP+          ++  +TA               ED  +I S+PI  
Subjt:  VLTGARSPSGSYFWHGFLWGRELLSMGLRKRIGDGSSTYFYTDPWLPRLATFKPIH-------AKLSGLLTA---------------EDFQIIQSIPIRR

Query:  MKSEDVWLWHYDKHGIYSVKTGYKLQMLHVVC
           +D WLWHYDK G YSV++GYKL M H+ C
Subjt:  MKSEDVWLWHYDKHGIYSVKTGYKLQMLHVVC

A0A6P5R9I8 uncharacterized protein LOC110745747 isoform X22.4e-1844.76Show/hide
Query:  LTGARSPSGSYFWHGFLWGRELLSMGLRKRIGDGSSTYFYTDPWLPRLATFKPIHAKLSGLLT-AEDFQIIQSIPIRRMKSEDVWLWHYDKHGIYSVKTG
        L   +  + SY W   +WGRELL  GLRK IGDG  T  Y D W+P   +F+PI  ++    T  ED + I SIP+     +D W+WHY  +G YSVK+G
Subjt:  LTGARSPSGSYFWHGFLWGRELLSMGLRKRIGDGSSTYFYTDPWLPRLATFKPIHAKLSGLLT-AEDFQIIQSIPIRRMKSEDVWLWHYDKHGIYSVKTG

Query:  YKLQM
        Y+L+M
Subjt:  YKLQM

A0A6P5RL22 uncharacterized protein LOC110745747 isoform X37.0e-1844.23Show/hide
Query:  LTGARSPSGSYFWHGFLWGRELLSMGLRKRIGDGSSTYFYTDPWLPRLATFKPIHAKLSGLLTAEDFQIIQSIPIRRMKSEDVWLWHYDKHGIYSVKTGY
        L   +  + SY W   +WGRELL  GLRK IGDG  T  Y D W+P   +F+PI  +       ED + I SIP+     +D W+WHY  +G YSVK+GY
Subjt:  LTGARSPSGSYFWHGFLWGRELLSMGLRKRIGDGSSTYFYTDPWLPRLATFKPIHAKLSGLLTAEDFQIIQSIPIRRMKSEDVWLWHYDKHGIYSVKTGY

Query:  KLQM
        +L+M
Subjt:  KLQM

A0A803P9C5 Uncharacterized protein6.4e-1925.06Show/hide
Query:  SYFWHGFLWGRELLSMGLRKRIGDGSSTYFYTDPWLPRLATFKPI-----HAK----------------LSGLLTAEDFQIIQSIPIRRMKSEDVWLWHY
        S  W G +WGRELL+ GLR ++G GSS     D W+P   +FKP      H+                 L+   +  D + I +IP+  + + D W+WHY
Subjt:  SYFWHGFLWGRELLSMGLRKRIGDGSSTYFYTDPWLPRLATFKPI-----HAK----------------LSGLLTAEDFQIIQSIPIRRMKSEDVWLWHY

Query:  DKHGIYSVKTGYKL------------------------QMLHVV--CKRAKLFWKTLLPQVDWSTDFNNSFLDQCIFLHGLLSDFEFRLWCFGYWVLWND
        D  G YSV TGY                           + H +  C  AK  W      +D+S   + S  D  + L  + S  +        W +W++
Subjt:  DKHGIYSVKTGYKL------------------------QMLHVV--CKRAKLFWKTLLPQVDWSTDFNNSFLDQCIFLHGLLSDFEFRLWCFGYWVLWND

Query:  QNAFSN----------DKVLPDVSFKADWVGNYVASFLSLEDHRNVGLHGVGVVVRTVVGCLHVAQMEWFFLWFPTPLIEKAQAILVGLNLAQSLGLLWI
        +N++ +             +P   ++     NY  +  +  D     + G+GV+VR   G +  A  +     F +  +E A+A+ VGL+ A+   +   
Subjt:  QNAFSN----------DKVLPDVSFKADWVGNYVASFLSLEDHRNVGLHGVGVVVRTVVGCLHVAQMEWFFLWFPTPLIEKAQAILVGLNLAQSLGLLWI

Query:  EMEFDCFNLISMLNGTSFSLHEDDSWVENVLELASRFEEMVFRHVLPGGGGDCPTHVLASHA-YYEGSIVWCSSFPIWLTSVVLQDS
         +E DC  L++ LNG           V +V    S F  +   HV      +   H LA  A   +   +W    P  + SVV+ +S
Subjt:  EMEFDCFNLISMLNGTSFSLHEDDSWVENVLELASRFEEMVFRHVLPGGGGDCPTHVLASHA-YYEGSIVWCSSFPIWLTSVVLQDS

M5XJH9 Uncharacterized protein (Fragment)2.4e-1839.69Show/hide
Query:  PHGFVLTGARSPSGSYFWHGFLWGRELLSMGLRKRIGDGSSTYFYTDPWLPRLATFKPI-------HAKLSGLL---------------TAEDFQIIQSI
        P+   L   +  + SYFW   +WG ELL  GLRKRIGDG  T  Y D W+PR  +F+PI         K+S  +                 ED + I SI
Subjt:  PHGFVLTGARSPSGSYFWHGFLWGRELLSMGLRKRIGDGSSTYFYTDPWLPRLATFKPI-------HAKLSGLL---------------TAEDFQIIQSI

Query:  PIRRMKSEDVWLWHYDKHGIYSVKTGYKLQM
        P+     +D W+WHY  +GIYSVK+GY+L+M
Subjt:  PIRRMKSEDVWLWHYDKHGIYSVKTGYKLQM

SwissProt top hitse value%identityAlignment
P93295 Uncharacterized mitochondrial protein AtMg003107.3e-0435Show/hide
Query:  PHGFVLTGARSPSGSYFWHGFLWGRELLSMGLRKRIGDGSSTYFYTDPWLPRLATFKPIH
        PH  ++  +     SY W   + GRELLS GL + IGDG  T  + D W+       P++
Subjt:  PHGFVLTGARSPSGSYFWHGFLWGRELLSMGLRKRIGDGSSTYFYTDPWLPRLATFKPIH

Arabidopsis top hitse value%identityAlignment
ATMG00310.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein5.2e-0535Show/hide
Query:  PHGFVLTGARSPSGSYFWHGFLWGRELLSMGLRKRIGDGSSTYFYTDPWLPRLATFKPIH
        PH  ++  +     SY W   + GRELLS GL + IGDG  T  + D W+       P++
Subjt:  PHGFVLTGARSPSGSYFWHGFLWGRELLSMGLRKRIGDGSSTYFYTDPWLPRLATFKPIH


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACTATGCTGCTGAGTTGTCCTTTTAATCTGACTCGGAGAACTTCATTAAATGAGCTGGCTTTGACTGATCCACATGGTTTTGTGCTTACGGGGGCCCGCTCTCCTTC
TGGGTCTTACTTTTGGCATGGATTTCTTTGGGGTCGGGAGTTGTTGAGCATGGGTCTTCGCAAGCGTATTGGTGATGGTTCTTCAACCTACTTTTACACAGATCCATGGC
TCCCCCGACTCGCTACATTTAAGCCTATTCATGCAAAGCTGTCGGGTCTGCTTACTGCTGAAGATTTCCAAATTATTCAGAGTATTCCAATTCGAAGGATGAAATCTGAA
GATGTTTGGTTGTGGCATTATGATAAGCATGGAATTTATTCGGTTAAAACTGGGTATAAGTTACAAATGCTTCATGTGGTTTGCAAAAGAGCCAAGTTATTTTGGAAGAC
CCTGCTGCCACAGGTTGATTGGTCCACTGATTTTAATAATAGCTTTCTAGATCAGTGCATCTTTCTACATGGTTTGTTGTCTGATTTTGAGTTTCGATTGTGGTGTTTTG
GCTATTGGGTTCTCTGGAATGATCAGAATGCTTTCTCAAATGACAAGGTTCTCCCTGATGTTTCGTTTAAAGCTGATTGGGTGGGAAATTATGTGGCTTCGTTCTTATCT
CTGGAAGATCATAGGAATGTTGGTTTGCATGGGGTTGGTGTGGTTGTTCGAACTGTTGTGGGATGCCTTCATGTTGCTCAAATGGAGTGGTTCTTTCTGTGGTTTCCTAC
TCCTTTAATTGAAAAGGCTCAGGCTATTCTCGTGGGGTTGAATTTGGCTCAATCTTTGGGGCTTTTGTGGATTGAGATGGAGTTTGATTGTTTTAATCTTATTTCCATGC
TTAATGGCACATCTTTTTCCCTACATGAGGATGATTCTTGGGTAGAGAATGTCCTTGAGTTGGCTTCTCGGTTTGAGGAAATGGTTTTTCGTCATGTTCTTCCCGGGGGG
GGGGGGGATTGTCCGACGCATGTGTTGGCCTCTCACGCCTACTATGAGGGCTCTATTGTTTGGTGTTCTTCTTTCCCTATATGGTTGACGAGTGTAGTCCTTCAGGATTC
TCCTCTTGATAGTTGTAGCCCATGTGGCTCTTTGCTTCTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGACTATGCTGCTGAGTTGTCCTTTTAATCTGACTCGGAGAACTTCATTAAATGAGCTGGCTTTGACTGATCCACATGGTTTTGTGCTTACGGGGGCCCGCTCTCCTTC
TGGGTCTTACTTTTGGCATGGATTTCTTTGGGGTCGGGAGTTGTTGAGCATGGGTCTTCGCAAGCGTATTGGTGATGGTTCTTCAACCTACTTTTACACAGATCCATGGC
TCCCCCGACTCGCTACATTTAAGCCTATTCATGCAAAGCTGTCGGGTCTGCTTACTGCTGAAGATTTCCAAATTATTCAGAGTATTCCAATTCGAAGGATGAAATCTGAA
GATGTTTGGTTGTGGCATTATGATAAGCATGGAATTTATTCGGTTAAAACTGGGTATAAGTTACAAATGCTTCATGTGGTTTGCAAAAGAGCCAAGTTATTTTGGAAGAC
CCTGCTGCCACAGGTTGATTGGTCCACTGATTTTAATAATAGCTTTCTAGATCAGTGCATCTTTCTACATGGTTTGTTGTCTGATTTTGAGTTTCGATTGTGGTGTTTTG
GCTATTGGGTTCTCTGGAATGATCAGAATGCTTTCTCAAATGACAAGGTTCTCCCTGATGTTTCGTTTAAAGCTGATTGGGTGGGAAATTATGTGGCTTCGTTCTTATCT
CTGGAAGATCATAGGAATGTTGGTTTGCATGGGGTTGGTGTGGTTGTTCGAACTGTTGTGGGATGCCTTCATGTTGCTCAAATGGAGTGGTTCTTTCTGTGGTTTCCTAC
TCCTTTAATTGAAAAGGCTCAGGCTATTCTCGTGGGGTTGAATTTGGCTCAATCTTTGGGGCTTTTGTGGATTGAGATGGAGTTTGATTGTTTTAATCTTATTTCCATGC
TTAATGGCACATCTTTTTCCCTACATGAGGATGATTCTTGGGTAGAGAATGTCCTTGAGTTGGCTTCTCGGTTTGAGGAAATGGTTTTTCGTCATGTTCTTCCCGGGGGG
GGGGGGGATTGTCCGACGCATGTGTTGGCCTCTCACGCCTACTATGAGGGCTCTATTGTTTGGTGTTCTTCTTTCCCTATATGGTTGACGAGTGTAGTCCTTCAGGATTC
TCCTCTTGATAGTTGTAGCCCATGTGGCTCTTTGCTTCTTTAA
Protein sequenceShow/hide protein sequence
MTMLLSCPFNLTRRTSLNELALTDPHGFVLTGARSPSGSYFWHGFLWGRELLSMGLRKRIGDGSSTYFYTDPWLPRLATFKPIHAKLSGLLTAEDFQIIQSIPIRRMKSE
DVWLWHYDKHGIYSVKTGYKLQMLHVVCKRAKLFWKTLLPQVDWSTDFNNSFLDQCIFLHGLLSDFEFRLWCFGYWVLWNDQNAFSNDKVLPDVSFKADWVGNYVASFLS
LEDHRNVGLHGVGVVVRTVVGCLHVAQMEWFFLWFPTPLIEKAQAILVGLNLAQSLGLLWIEMEFDCFNLISMLNGTSFSLHEDDSWVENVLELASRFEEMVFRHVLPGG
GGDCPTHVLASHAYYEGSIVWCSSFPIWLTSVVLQDSPLDSCSPCGSLLL