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Lag0032521 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0032521
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionPentraxin 4, long
Genome locationchr11:33958318..33959562
RNA-Seq ExpressionLag0032521
SyntenyLag0032521
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAE1278358.1 unnamed protein product [Sepia pharaonis]2.2e-0428.24Show/hide
Query:  FSGLLKLFPQKSVRTPRMTTMLEERLGKFPGLSKLFPQKSVRTPGMATMLEERLGKFPGLPKLFLQKSVRTPGMTMQLEERLRKFPDLPKLFPQKIVRTP
        F  L  LFP  S+  P ++ +       FP LS LFP  S+  P ++ +       FP L  LF   S+  P +++         P L  LFP   +  P
Subjt:  FSGLLKLFPQKSVRTPRMTTMLEERLGKFPGLSKLFPQKSVRTPGMATMLEERLGKFPGLPKLFLQKSVRTPGMTMQLEERLRKFPDLPKLFPQKIVRTP

Query:  GMTTMLEERLRKFLSLPKLFPQKSVRTPGMN
         ++ +       F SL  LFP  S+  P ++
Subjt:  GMTTMLEERLRKFLSLPKLFPQKSVRTPGMN

KAG9273772.1 hypothetical protein AMEX_G10521 [Astyanax mexicanus]3.8e-0430.77Show/hide
Query:  KFSGLLKLFPQKSVRTPRMTTMLEERLGKFPGLSKLFPQKSVRTPGMATMLEERLGKFPGLPKLFLQKSVRTPGMTMQLEERLRKFPDLPKLFPQKIVRT
        +F G     P  SV+ P  +  L     +FPG S   P  SV+ PG +  L     +FPG        SV+ PG + QL     +FP     FP   V+ 
Subjt:  KFSGLLKLFPQKSVRTPRMTTMLEERLGKFPGLSKLFPQKSVRTPGMATMLEERLGKFPGLPKLFLQKSVRTPGMTMQLEERLRKFPDLPKLFPQKIVRT

Query:  PGMTTMLEERLRKFLSLPKLFPQKSVRTPG
        PG +  L     +F       P  SV+ PG
Subjt:  PGMTTMLEERLRKFLSLPKLFPQKSVRTPG

XP_032924805.1 proline-rich protein 36-like [Catharus ustulatus]8.2e-0729.37Show/hide
Query:  LFPQKSVRTPRMTTMLEERLGKFPGLSKLFPQKSVRTPGMATMLEERLGKFPGLPKLFLQKSVRTPGMTMQLEERLRKFPDLPKLFPQKIVRTPGMTTML
        + P+ S+ TP  TT+L E     P  + + P+ S+ TP   T+L E     P    +    S+ TP  T  L E     P    + P   + TP  TT+L
Subjt:  LFPQKSVRTPRMTTMLEERLGKFPGLSKLFPQKSVRTPGMATMLEERLGKFPGLPKLFLQKSVRTPGMTMQLEERLRKFPDLPKLFPQKIVRTPGMTTML

Query:  EERLRKFLSLPKLFPQKSVRTPGMNT
         E      S   + P+ S+ TP   T
Subjt:  EERLRKFLSLPKLFPQKSVRTPGMNT

TrEMBL top hitse value%identityAlignment
A0A674AJW3 Pentraxin 4, long6.3e-0528.1Show/hide
Query:  LEERLGKFSGLLKLFPQKSVRTPRMTTMLEERLGKFPGLSKLFPQKSVRTPGMATMLEERLGKFPGLPKLFLQKSVRT---PGMTMQLEERLRKFPDL--
        + +R+ K   +  L PQ+ V+T  +  ++ +R+ K   +  L PQ+ V+T  +  ++ +R+ K   +P L  Q+ V+T   PG+  Q   + R  P L  
Subjt:  LEERLGKFSGLLKLFPQKSVRTPRMTTMLEERLGKFPGLSKLFPQKSVRTPGMATMLEERLGKFPGLPKLFLQKSVRT---PGMTMQLEERLRKFPDL--

Query:  --------PKLFPQKIVRTPGMTTMLEERLRKFLSLPKLFPQKSVRT---PGM
                P L PQ++V+T  +  ++ +R+ K   +P L PQ+ V+T   PG+
Subjt:  --------PKLFPQKIVRTPGMTTMLEERLRKFLSLPKLFPQKSVRT---PGM

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACGAGCAAAAGATGTCGAGGGAATGTTACTTTATGGCGCTCAGGAACATCGACAGGAAGGTTCAAGCAACGTCGGCCTCGGGAGATGGACGAGGCCGAGCCTTTGAG
GGGAGCTGGTCGGCCTCATGCCAAGGCTGAGGCCGACCACCTAGAGGCTAAGGCCAAACACCACCTTCAAGAGCTCGGTCACGAACTTGAAGAGAGGCTTGGGAAATTCT
CAGGCCTCCTCAAGCTTTTTCCCCAGAAGAGTGTACGCACCCCTAGGATGACCACGATGCTTGAAGAGAGGCTCGGGAAATTCCCAGGCCTCTCCAAGCTTTTTCCCCAG
AAGAGTGTACGCACCCCTGGGATGGCCACGATGCTTGAAGAGAGGCTCGGGAAATTCCCAGGCCTCCCCAAGCTTTTTCTCCAGAAGAGTGTACGCACCCCTGGGATGAC
CATGCAACTTGAAGAGAGGCTCAGGAAATTCCCAGACCTCCCCAAGCTTTTTCCCCAGAAGATTGTACGCACCCCTGGGATGACCACAATGCTTGAAGAGAGGCTCAGGA
AATTCCTAAGTCTCCCCAAGCTTTTTCCCCAGAAGAGTGTACGCACCCCTGGGATGAATACAGCAGCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGACGAGCAAAAGATGTCGAGGGAATGTTACTTTATGGCGCTCAGGAACATCGACAGGAAGGTTCAAGCAACGTCGGCCTCGGGAGATGGACGAGGCCGAGCCTTTGAG
GGGAGCTGGTCGGCCTCATGCCAAGGCTGAGGCCGACCACCTAGAGGCTAAGGCCAAACACCACCTTCAAGAGCTCGGTCACGAACTTGAAGAGAGGCTTGGGAAATTCT
CAGGCCTCCTCAAGCTTTTTCCCCAGAAGAGTGTACGCACCCCTAGGATGACCACGATGCTTGAAGAGAGGCTCGGGAAATTCCCAGGCCTCTCCAAGCTTTTTCCCCAG
AAGAGTGTACGCACCCCTGGGATGGCCACGATGCTTGAAGAGAGGCTCGGGAAATTCCCAGGCCTCCCCAAGCTTTTTCTCCAGAAGAGTGTACGCACCCCTGGGATGAC
CATGCAACTTGAAGAGAGGCTCAGGAAATTCCCAGACCTCCCCAAGCTTTTTCCCCAGAAGATTGTACGCACCCCTGGGATGACCACAATGCTTGAAGAGAGGCTCAGGA
AATTCCTAAGTCTCCCCAAGCTTTTTCCCCAGAAGAGTGTACGCACCCCTGGGATGAATACAGCAGCTTGA
Protein sequenceShow/hide protein sequence
MTSKRCRGNVTLWRSGTSTGRFKQRRPREMDEAEPLRGAGRPHAKAEADHLEAKAKHHLQELGHELEERLGKFSGLLKLFPQKSVRTPRMTTMLEERLGKFPGLSKLFPQ
KSVRTPGMATMLEERLGKFPGLPKLFLQKSVRTPGMTMQLEERLRKFPDLPKLFPQKIVRTPGMTTMLEERLRKFLSLPKLFPQKSVRTPGMNTAA