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Lag0032524 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0032524
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionF-box/kelch-repeat protein At1g23390
Genome locationchr11:34005164..34005541
RNA-Seq ExpressionLag0032524
SyntenyLag0032524
Gene Ontology termsGO:0043161 - proteasome-mediated ubiquitin-dependent protein catabolic process (biological process)
GO:0005634 - nucleus (cellular component)
GO:0005829 - cytosol (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6601515.1 F-box/kelch-repeat protein, partial [Cucurbita argyrosperma subsp. sororia]3.9e-0470.59Show/hide
Query:  EIYDMKSKACDTCDELSSIFADYATATWFSVAVD
        EI+D+KS   DTC+EL SIFA+YATA WFS+AVD
Subjt:  EIYDMKSKACDTCDELSSIFADYATATWFSVAVD
XP_022956902.1 F-box/kelch-repeat protein At1g23390 [Cucurbita moschata]3.9e-0470.59Show/hide
Query:  EIYDMKSKACDTCDELSSIFADYATATWFSVAVD
        EI+D+KS   DTC+EL SIFA+YATA WFS+AVD
Subjt:  EIYDMKSKACDTCDELSSIFADYATATWFSVAVD
XP_022994769.1 F-box/kelch-repeat protein At1g23390 [Cucurbita maxima]7.9e-0573.53Show/hide
Query:  EIYDMKSKACDTCDELSSIFADYATATWFSVAVD
        EIY++KSK  DTC+EL SIFA+YATA WFS+AVD
Subjt:  EIYDMKSKACDTCDELSSIFADYATATWFSVAVD
XP_023552273.1 F-box/kelch-repeat protein At1g23390 [Cucurbita pepo subsp. pepo]3.9e-0470.59Show/hide
Query:  EIYDMKSKACDTCDELSSIFADYATATWFSVAVD
        EI+D+KS   DTC+EL SIFA+YATA WFS+AVD
Subjt:  EIYDMKSKACDTCDELSSIFADYATATWFSVAVD
XP_038891457.1 LOW QUALITY PROTEIN: F-box/kelch-repeat protein At1g23390 [Benincasa hispida]1.0e-0469.44Show/hide
Query:  EIYDMKSKACDTCDELSSIFADYATATWFSVAVDKF
        EIYD++SK  DTC EL SIFA++ TATWFSVAVD++
Subjt:  EIYDMKSKACDTCDELSSIFADYATATWFSVAVDKF
TrEMBL top hitse value%identityAlignment
A0A0A0KQ77 F-box domain-containing protein4.2e-0467.65Show/hide
Query:  EIYDMKSKACDTCDELSSIFADYATATWFSVAVD
        EIYD++S   DTC++L SIFA+YATA W+SVAVD
Subjt:  EIYDMKSKACDTCDELSSIFADYATATWFSVAVD
A0A6J1GXN4 F-box/kelch-repeat protein At1g233901.9e-0470.59Show/hide
Query:  EIYDMKSKACDTCDELSSIFADYATATWFSVAVD
        EI+D+KS   DTC+EL SIFA+YATA WFS+AVD
Subjt:  EIYDMKSKACDTCDELSSIFADYATATWFSVAVD
A0A6J1K3T3 F-box/kelch-repeat protein At1g233903.8e-0573.53Show/hide
Query:  EIYDMKSKACDTCDELSSIFADYATATWFSVAVD
        EIY++KSK  DTC+EL SIFA+YATA WFS+AVD
Subjt:  EIYDMKSKACDTCDELSSIFADYATATWFSVAVD
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGCATGTGGGAGAGTAAAAACAAAGCTAGAGGGAAAAGGGAGAGAGAGAATGAAATGAGAAGAAGAGGAAGAGAGGAAATTTACGACATGAAATCCAAAGCCTGTGA
TACGTGCGACGAACTGTCTTCGATCTTCGCCGATTACGCCACTGCCACATGGTTCTCGGTTGCCGTCGACAAATTCGGCGGCAATGTTTTTGTTCGACCCAATAGAGAAA
TCGTGGGTCAGATCGTATGGCATCGATTCAGATGTCTTTTCGGCGATAATCGGTTTTGCCAGCGGCGGGATGGTGGTTGTGGGGCTATTGGGGTCGCCGGCGGCGACGGG
GAGGAGTGCCGGCGGTGGAGAGAAAAAGAGGGAGGAGGTGGGGGATGA
mRNA sequenceShow/hide mRNA sequence
ATGGGCATGTGGGAGAGTAAAAACAAAGCTAGAGGGAAAAGGGAGAGAGAGAATGAAATGAGAAGAAGAGGAAGAGAGGAAATTTACGACATGAAATCCAAAGCCTGTGA
TACGTGCGACGAACTGTCTTCGATCTTCGCCGATTACGCCACTGCCACATGGTTCTCGGTTGCCGTCGACAAATTCGGCGGCAATGTTTTTGTTCGACCCAATAGAGAAA
TCGTGGGTCAGATCGTATGGCATCGATTCAGATGTCTTTTCGGCGATAATCGGTTTTGCCAGCGGCGGGATGGTGGTTGTGGGGCTATTGGGGTCGCCGGCGGCGACGGG
GAGGAGTGCCGGCGGTGGAGAGAAAAAGAGGGAGGAGGTGGGGGATGA
Protein sequenceShow/hide protein sequence
MGMWESKNKARGKRERENEMRRRGREEIYDMKSKACDTCDELSSIFADYATATWFSVAVDKFGGNVFVRPNREIVGQIVWHRFRCLFGDNRFCQRRDGGCGAIGVAGGDG
EECRRWREKEGGGGG