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Lag0032526 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0032526
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionUnknown protein
Genome locationchr11:34022980..34023342
RNA-Seq ExpressionLag0032526
SyntenyLag0032526
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_010666463.1 PREDICTED: chloride channel protein F-like [Beta vulgaris subsp. vulgaris]1.1e-0843.8Show/hide
Query:  RLEKLTQSQRGALDKFFAKESHTPIESNNVVDIDNENILSENCDNLNDNADSCVNLD-ENVSFDNEN-PS-SDVPIQNTNPITDNHTSQPENNDALNVEN
        R+E+LTQSQRGALDKF  KESH   +SNN V +++E +L +NC   NDN    V LD +N+SFD  N PS +D+   + +    N     ENND +  +N
Subjt:  RLEKLTQSQRGALDKFFAKESHTPIESNNVVDIDNENILSENCDNLNDNADSCVNLD-ENVSFDNEN-PS-SDVPIQNTNPITDNHTSQPENNDALNVEN

Query:  DIDVANMP----DIFDPRTWE
          + +N      D+FDPR W+
Subjt:  DIDVANMP----DIFDPRTWE

XP_010677688.1 PREDICTED: zinc finger MYM-type protein 5-like [Beta vulgaris subsp. vulgaris]6.2e-0739.53Show/hide
Query:  RLEKLTQSQRGALDKFFAKESHTPIESNNVVDIDNENILSENCDNLNDNADSCVNLDENVSFDNENPSS----DVPIQNTNPITDNHTSQPE-NNDALNV
        RLE+LTQS++GALDKF  KE H        + +DN+NI  EN  NL+D        +ENV  +N+N  S    D+PI+N N    N  S  + + D  + 
Subjt:  RLEKLTQSQRGALDKFFAKESHTPIESNNVVDIDNENILSENCDNLNDNADSCVNLDENVSFDNENPSS----DVPIQNTNPITDNHTSQPE-NNDALNV

Query:  ENDIDVANMP-----DIFDPRTWEVLVPK
         ND +    P     DIFDPR W+ L  K
Subjt:  ENDIDVANMP-----DIFDPRTWEVLVPK

XP_010684557.1 PREDICTED: zinc finger MYM-type protein 1-like [Beta vulgaris subsp. vulgaris]4.0e-0635.48Show/hide
Query:  RLEKLTQSQRGALDKFFAKESHTPIESNNVVDIDNE----NILSENCDNLNDNADSCVNLDENVSFDNENPSSDVPIQNTNPITDN-HTSQPENNDALNV
        RLE+LTQSQRGALDKF  KE H  +++ N+  +++E     + ++N D  N N DS    D ++  DN        + N N +++N +    E+N   N 
Subjt:  RLEKLTQSQRGALDKFFAKESHTPIESNNVVDIDNE----NILSENCDNLNDNADSCVNLDENVSFDNENPSSDVPIQNTNPITDN-HTSQPENNDALNV

Query:  ENDIDVANMPDIFDPRTWEVLVPK
        + +     + DIFDPR W+ L  K
Subjt:  ENDIDVANMPDIFDPRTWEVLVPK

XP_010692630.1 PREDICTED: zinc finger MYM-type protein 1-like [Beta vulgaris subsp. vulgaris]2.4e-1147.5Show/hide
Query:  RLEKLTQSQRGALDKFFAKESHTPIESNNVVDIDNENILSENCDNLNDNADSCVNLD-ENVSFDNENPSSDVPIQNTNPITDNHTSQPENNDALNVENDI
        R+E+LTQSQRGALDKF  KESH   +SN  V +++E  L +NC N NDN    V LD +N+SFD   PS +  I + NP+ +N+ +  ENN  L+  ND 
Subjt:  RLEKLTQSQRGALDKFFAKESHTPIESNNVVDIDNENILSENCDNLNDNADSCVNLD-ENVSFDNENPSSDVPIQNTNPITDNHTSQPENNDALNVENDI

Query:  DVANMPDIFDPRTWEVLVPK
              DIFDPR W+ L  K
Subjt:  DVANMPDIFDPRTWEVLVPK

XP_034197984.1 suppressor of Mek1-like [Prunus dulcis]3.1e-0635.54Show/hide
Query:  RLEKLTQSQRGALDKFFAKESHTPIESNNVVDIDNENILSENCDNLNDNADSCV-NLDENVSFDNENPSSDVPIQNTNPITDNHTSQPENNDALNVENDI
        ++E+LTQSQRGALD+F  +ESH  I+ N   + + E    E   ++ +N D CV N ++N + DNEN   D    +   + D       N +  N+ N+ 
Subjt:  RLEKLTQSQRGALDKFFAKESHTPIESNNVVDIDNENILSENCDNLNDNADSCV-NLDENVSFDNENPSSDVPIQNTNPITDNHTSQPENNDALNVENDI

Query:  DVANMP-DIFDPRTWEVLVPK
           ++P DI+DPR W+ + PK
Subjt:  DVANMP-DIFDPRTWEVLVPK

TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGACTAGAAAAGTTAACTCAATCTCAAAGAGGAGCTCTTGATAAGTTCTTTGCGAAGGAATCACACACTCCTATTGAAAGTAATAATGTTGTTGATATTGATAATGA
AAATATTTTGAGTGAAAATTGTGATAATTTGAATGATAATGCTGATAGTTGTGTTAATTTGGATGAAAATGTGTCTTTTGACAATGAAAACCCTTCTAGTGATGTTCCCA
TTCAAAATACTAATCCTATTACCGATAATCACACTAGTCAGCCTGAGAACAACGATGCTTTAAATGTTGAAAATGATATTGATGTTGCAAATATGCCTGATATATTTGAT
CCTAGAACTTGGGAGGTCTTAGTGCCAAAATGA
mRNA sequenceShow/hide mRNA sequence
ATGAGACTAGAAAAGTTAACTCAATCTCAAAGAGGAGCTCTTGATAAGTTCTTTGCGAAGGAATCACACACTCCTATTGAAAGTAATAATGTTGTTGATATTGATAATGA
AAATATTTTGAGTGAAAATTGTGATAATTTGAATGATAATGCTGATAGTTGTGTTAATTTGGATGAAAATGTGTCTTTTGACAATGAAAACCCTTCTAGTGATGTTCCCA
TTCAAAATACTAATCCTATTACCGATAATCACACTAGTCAGCCTGAGAACAACGATGCTTTAAATGTTGAAAATGATATTGATGTTGCAAATATGCCTGATATATTTGAT
CCTAGAACTTGGGAGGTCTTAGTGCCAAAATGA
Protein sequenceShow/hide protein sequence
MRLEKLTQSQRGALDKFFAKESHTPIESNNVVDIDNENILSENCDNLNDNADSCVNLDENVSFDNENPSSDVPIQNTNPITDNHTSQPENNDALNVENDIDVANMPDIFD
PRTWEVLVPK