; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0032571 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0032571
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationchr11:34809072..34809641
RNA-Seq ExpressionLag0032571
SyntenyLag0032571
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
MCH81570.1 hypothetical protein [Trifolium medium]4.5e-1132.14Show/hide
Query:  DHLQFHHSDHGPVILEINWEKQLKQGRPKKRSIKFEEA-----------------NNFNFSAKIQGGMEAMNRWNKTRLQGSIQEAIKRKEMEISSL-SN
        +HL  + SDH P++LE +     +    K  S KFE+                   N N   K+Q  + A++ W +    G I + IK+ + ++ +L  +
Subjt:  DHLQFHHSDHGPVILEINWEKQLKQGRPKKRSIKFEEA-----------------NNFNFSAKIQGGMEAMNRWNKTRLQGSIQEAIKRKEMEISSL-SN

Query:  PSNKEKFLKLSQLEKDLETLLEEEEHYWKMRLREGWLKKGDRNTKWFHSKASHRKRKNEIKGILTRME
         +++    ++   E++L+ LLE+EE +W  R R  WL  GD+NTK+FH KAS R+RKN+I+GI   M+
Subjt:  PSNKEKFLKLSQLEKDLETLLEEEEHYWKMRLREGWLKKGDRNTKWFHSKASHRKRKNEIKGILTRME

XP_023920265.1 uncharacterized protein LOC112031795 [Quercus suber]4.9e-1033.91Show/hide
Query:  KVDHLQFHHSDHGPVILEINWEKQLKQGRPKKRSIKFEEA-----------------------NNFNFSAKIQGGMEAMNRWNKTRLQGSIQEAIKRKEM
        +V HL  H SDH P++L++      +Q R K  S KFEEA                          +   KIQ     +  W        + EAIK  + 
Subjt:  KVDHLQFHHSDHGPVILEINWEKQLKQGRPKKRSIKFEEA-----------------------NNFNFSAKIQGGMEAMNRWNKTRLQGSIQEAIKRKEM

Query:  EISSLS----NPSNKEKFLKLSQLEKDLETLLEEEEHYWKMRLREGWLKKGDRNTKWFHSKASHRKRKNEIKGI
         +  L+    + ++K +FL LS   K ++ LL+++E +W  R R  WLK GD+NTK+FHSKA+ R+RKN I+GI
Subjt:  EISSLS----NPSNKEKFLKLSQLEKDLETLLEEEEHYWKMRLREGWLKKGDRNTKWFHSKASHRKRKNEIKGI

XP_030502781.1 uncharacterized protein LOC115717953 [Cannabis sativa]4.9e-1032.75Show/hide
Query:  KVDHLQFHHSDHGPVILEINWEKQLKQGRPKKRS--------IKFEEANNFNFSAKIQGGM---------------EAMNRWNKTRLQGSIQEAIKRKEM
        KV HL   +SDH P++L +N          K RS         + EE  N   SA ++                   A+ +WN+ R +  + + +     
Subjt:  KVDHLQFHHSDHGPVILEINWEKQLKQGRPKKRS--------IKFEEANNFNFSAKIQGGM---------------EAMNRWNKTRLQGSIQEAIKRKEM

Query:  EISSLSNPSNKEKFLKLSQLEKDLETLLEEEEHYWKMRLREGWLKKGDRNTKWFHSKASHRKRKNEIKGIL
        +IS L+  +N   + +L  LE     LL++EE +W+ R R  WLK+GD+NTK+FH KAS+RK KN IKG++
Subjt:  EISSLSNPSNKEKFLKLSQLEKDLETLLEEEEHYWKMRLREGWLKKGDRNTKWFHSKASHRKRKNEIKGIL

XP_030924668.1 uncharacterized protein LOC115951644 [Quercus lobata]1.7e-1030.64Show/hide
Query:  KTKGLKVDHLQFHHSDHGPVILEINWE--KQLKQGRP--------KKRSI----------KFEEANNFNFSAKIQGGMEAMNRWNKTRLQGSIQEAIKRK
        + K L + HL   HSDH P++L  + E  +  K+GRP        + RS           +  +A  + F++KI      +  WNK ++ G ++ ++K+K
Subjt:  KTKGLKVDHLQFHHSDHGPVILEINWE--KQLKQGRP--------KKRSI----------KFEEANNFNFSAKIQGGMEAMNRWNKTRLQGSIQEAIKRK

Query:  EMEIS-SLSNPSNKEKFLKLSQLEKDLETLLEEEEHYWKMRLREGWLKKGDRNTKWFHSKASHRKRKNEIKGI
          ++     N   ++  +++  L  +++ L  +EE  WK R R  WLK+GDRNTK+FH +A+ R R+N I G+
Subjt:  EMEIS-SLSNPSNKEKFLKLSQLEKDLETLLEEEEHYWKMRLREGWLKKGDRNTKWFHSKASHRKRKNEIKGI

XP_030925054.1 uncharacterized protein LOC115952115 [Quercus lobata]3.8e-1030.95Show/hide
Query:  KVDHLQFHHSDHGPVILEINWEKQ--LKQGRP--------KKRS----------IKFEEANNFNFSAKIQGGMEAMNRWNKTRLQGSIQEAIKRKEMEIS
        ++ HL   HSDH P++L  + E+    K+GRP        K RS          +   +A  + F++KI      +  WNK +  G ++ ++K+K  E+ 
Subjt:  KVDHLQFHHSDHGPVILEINWEKQ--LKQGRP--------KKRS----------IKFEEANNFNFSAKIQGGMEAMNRWNKTRLQGSIQEAIKRKEMEIS

Query:  SLSNPSN-KEKFLKLSQLEKDLETLLEEEEHYWKMRLREGWLKKGDRNTKWFHSKASHRKRKNEIKGI
        S       +    ++ +L  D++ L   EE  WK R R  WLK+GD+NT++FH +A+ R R+N I G+
Subjt:  SLSNPSN-KEKFLKLSQLEKDLETLLEEEEHYWKMRLREGWLKKGDRNTKWFHSKASHRKRKNEIKGI

TrEMBL top hitse value%identityAlignment
A0A2N9GF83 CCHC-type domain-containing protein2.0e-1232.95Show/hide
Query:  KGLKVDHLQFHHSDHGPVILEINWEKQLKQGRPKKRSIKFEE-----------------------ANNFNFSAKIQGGMEAMNRWNKTRLQGSIQEAIKR
        +GL V HL   +SDH P+ + +     L+  RPKK   +FE                        +  F    K++G   A+  W+K R  GS+  +IK 
Subjt:  KGLKVDHLQFHHSDHGPVILEINWEKQLKQGRPKKRSIKFEE-----------------------ANNFNFSAKIQGGMEAMNRWNKTRLQGSIQEAIKR

Query:  KEMEISSLSNPSNKEKFLKLSQLEKDLETLLEEEEHYWKMRLREGWLKKGDRNTKWFHSKASHRKRKNEIKGI
        K M++ SL          ++ +L+ DL  LLE+EE YW+ R R  W+K+GD+NTK+FH++ S R+  N++KG+
Subjt:  KEMEISSLSNPSNKEKFLKLSQLEKDLETLLEEEEHYWKMRLREGWLKKGDRNTKWFHSKASHRKRKNEIKGI

A0A803P4U9 Uncharacterized protein2.6e-1235.54Show/hide
Query:  LQFHHSDHGPVILEINWEKQLKQGRPKKRS-IKFEEA----------------------NNFNFSAKIQGGMEAMNRWNKTRLQGSIQEAIKRKEMEISS
        L + +SDH P+ L  +     K+ R  + S   FE+A                      N  N    +QG  E +++WNK R +  + + IK  + +I  
Subjt:  LQFHHSDHGPVILEINWEKQLKQGRPKKRS-IKFEEA----------------------NNFNFSAKIQGGMEAMNRWNKTRLQGSIQEAIKRKEMEISS

Query:  LSNPSNKEKFLKLSQLEKDLETLLEEEEHYWKMRLREGWLKKGDRNTKWFHSKASHRKRKNEIKGI
        LS    +  +L + +LE DL  + E+ E YWK R R  WLK GDRNTK+FH KAS RKRKN I+G+
Subjt:  LSNPSNKEKFLKLSQLEKDLETLLEEEEHYWKMRLREGWLKKGDRNTKWFHSKASHRKRKNEIKGI

A0A803P9M1 Uncharacterized protein3.0e-1338.26Show/hide
Query:  LQFHHSDHGPVILEINWEKQLKQ-GRPKKRS-IKFEEANNFNFSAKIQGGMEAMNRWNKTRLQGSIQEAIKRKEMEISSLSNPSNKEKFLKLSQLEKDLE
        L +  SDH P+++E+    + ++ G+ K++S   FEEA  F    K  G   A+  WNK + + ++Q   K+ +  IS LS   +   + +L  LEK L 
Subjt:  LQFHHSDHGPVILEINWEKQLKQ-GRPKKRS-IKFEEANNFNFSAKIQGGMEAMNRWNKTRLQGSIQEAIKRKEMEISSLSNPSNKEKFLKLSQLEKDLE

Query:  TLLEEEEHYWKMRLREGWLKKGDRNTKWFHSKASHRKRKNEIKGILTRM
         +LE++E YW+ R +  WLK GD NTK+F+ KAS R++KNEIKG++  M
Subjt:  TLLEEEEHYWKMRLREGWLKKGDRNTKWFHSKASHRKRKNEIKGILTRM

A0A803Q7Q3 Uncharacterized protein8.8e-1336.49Show/hide
Query:  KVDHLQFHHSDHGPVILEINWEKQLKQGRPKKRSIKFEEANNFNFSAKIQGGMEAMNRWNKTRLQGSIQEAIKRKEMEISSLSNPSNKEKFLKLSQLEKD
        KV HL+  +SDH P++L        KQ     + +++   + F+F         ++N WNK+R +  +   IK  E +I++LS  ++   + +L +LE+ 
Subjt:  KVDHLQFHHSDHGPVILEINWEKQLKQGRPKKRSIKFEEANNFNFSAKIQGGMEAMNRWNKTRLQGSIQEAIKRKEMEISSLSNPSNKEKFLKLSQLEKD

Query:  LETLLEEEEHYWKMRLREGWLKKGDRNTKWFHSKASHRKRKNEIKGIL
            L++EE +WK R R  WLK+GDRNTK+FH KA+ RK+KN I G+L
Subjt:  LETLLEEEEHYWKMRLREGWLKKGDRNTKWFHSKASHRKRKNEIKGIL

A0A803QMV0 Uncharacterized protein3.3e-1234.1Show/hide
Query:  LKVDHLQFHHSDHGPVILEINWEKQLKQGRPKKRSIKF---------EEANNFNFSA-----KIQGGMEAMNR----------WNKTRLQGSIQEAIKRK
        +KV HL   +SDH P++L + ++  +K+    +   +F         EE +N   S      KI    E  NR          WNK++ Q  +   +K  
Subjt:  LKVDHLQFHHSDHGPVILEINWEKQLKQGRPKKRSIKF---------EEANNFNFSA-----KIQGGMEAMNR----------WNKTRLQGSIQEAIKRK

Query:  EMEISSLSNPSNKEKFLKLSQLEKDLETLLEEEEHYWKMRLREGWLKKGDRNTKWFHSKASHRKRKNEIKGIL
        E +IS LS  +N + + ++ +LE+     L++EE +WK R R  WLK+GD+NTK+FH KAS+RK KN I+G++
Subjt:  EMEISSLSNPSNKEKFLKLSQLEKDLETLLEEEEHYWKMRLREGWLKKGDRNTKWFHSKASHRKRKNEIKGIL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCACACAAAAACAAAAGGGCTAAAGGTGGATCATCTTCAATTCCACCACTCGGACCACGGACCGGTTATTCTGGAGATTAATTGGGAAAAGCAGTTAAAGCAAGGGAG
GCCTAAGAAGAGATCTATCAAATTTGAAGAAGCTAATAATTTCAATTTCAGTGCAAAGATCCAAGGGGGCATGGAAGCAATGAACAGATGGAACAAAACTAGACTCCAAG
GTTCTATTCAAGAAGCCATCAAAAGAAAGGAAATGGAGATCTCTAGCCTATCAAACCCGAGTAACAAAGAAAAGTTTCTGAAGCTTAGCCAACTTGAAAAAGATCTCGAG
ACTTTACTAGAAGAAGAGGAACATTACTGGAAAATGAGATTAAGGGAAGGCTGGTTAAAGAAAGGTGATAGGAACACCAAGTGGTTCCATTCCAAGGCCTCTCATAGGAA
AAGAAAGAATGAGATAAAGGGGATACTTACAAGGATGGAATCTGGGAAGAAAGTGAGCAATGGATAG
mRNA sequenceShow/hide mRNA sequence
ATGCACACAAAAACAAAAGGGCTAAAGGTGGATCATCTTCAATTCCACCACTCGGACCACGGACCGGTTATTCTGGAGATTAATTGGGAAAAGCAGTTAAAGCAAGGGAG
GCCTAAGAAGAGATCTATCAAATTTGAAGAAGCTAATAATTTCAATTTCAGTGCAAAGATCCAAGGGGGCATGGAAGCAATGAACAGATGGAACAAAACTAGACTCCAAG
GTTCTATTCAAGAAGCCATCAAAAGAAAGGAAATGGAGATCTCTAGCCTATCAAACCCGAGTAACAAAGAAAAGTTTCTGAAGCTTAGCCAACTTGAAAAAGATCTCGAG
ACTTTACTAGAAGAAGAGGAACATTACTGGAAAATGAGATTAAGGGAAGGCTGGTTAAAGAAAGGTGATAGGAACACCAAGTGGTTCCATTCCAAGGCCTCTCATAGGAA
AAGAAAGAATGAGATAAAGGGGATACTTACAAGGATGGAATCTGGGAAGAAAGTGAGCAATGGATAG
Protein sequenceShow/hide protein sequence
MHTKTKGLKVDHLQFHHSDHGPVILEINWEKQLKQGRPKKRSIKFEEANNFNFSAKIQGGMEAMNRWNKTRLQGSIQEAIKRKEMEISSLSNPSNKEKFLKLSQLEKDLE
TLLEEEEHYWKMRLREGWLKKGDRNTKWFHSKASHRKRKNEIKGILTRMESGKKVSNG