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Lag0032597 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0032597
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionZinc finger, RING-type
Genome locationchr11:35111634..35116937
RNA-Seq ExpressionLag0032597
SyntenyLag0032597
Gene Ontology termsGO:0016567 - protein ubiquitination (biological process)
GO:0046872 - metal ion binding (molecular function)
GO:0061630 - ubiquitin protein ligase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6605591.1 hypothetical protein SDJN03_02908, partial [Cucurbita argyrosperma subsp. sororia]1.6e-1992.31Show/hide
Query:  MMEVGLVPSGRPEEETAEAYDINYEISDEVERCGICMDVIVDRGVLDCCQHW
        MME GLVPSGR EEETAE YDINYE+SDEVERCGICMDVIVDRGVLDCCQHW
Subjt:  MMEVGLVPSGRPEEETAEAYDINYEISDEVERCGICMDVIVDRGVLDCCQHW
KAG7035500.1 hypothetical protein SDJN02_02296 [Cucurbita argyrosperma subsp. argyrosperma]1.6e-1992.31Show/hide
Query:  MMEVGLVPSGRPEEETAEAYDINYEISDEVERCGICMDVIVDRGVLDCCQHW
        MME GLVPSGR EEETAE YDINYE+SDEVERCGICMDVIVDRGVLDCCQHW
Subjt:  MMEVGLVPSGRPEEETAEAYDINYEISDEVERCGICMDVIVDRGVLDCCQHW
XP_022957989.1 uncharacterized protein At4g10930 isoform X1 [Cucurbita moschata]1.6e-1992.31Show/hide
Query:  MMEVGLVPSGRPEEETAEAYDINYEISDEVERCGICMDVIVDRGVLDCCQHW
        MME GLVPSGR EEETAE YDINYE+SDEVERCGICMDVIVDRGVLDCCQHW
Subjt:  MMEVGLVPSGRPEEETAEAYDINYEISDEVERCGICMDVIVDRGVLDCCQHW
XP_022996229.1 uncharacterized protein At4g10930 isoform X1 [Cucurbita maxima]7.1e-2092.31Show/hide
Query:  MMEVGLVPSGRPEEETAEAYDINYEISDEVERCGICMDVIVDRGVLDCCQHW
        MME GL+PSGR EEETAEAYDINYE+SDEVERCGICMDVIVDRGVLDCCQHW
Subjt:  MMEVGLVPSGRPEEETAEAYDINYEISDEVERCGICMDVIVDRGVLDCCQHW
XP_023534362.1 uncharacterized protein At4g10930 isoform X1 [Cucurbita pepo subsp. pepo]5.4e-2094.23Show/hide
Query:  MMEVGLVPSGRPEEETAEAYDINYEISDEVERCGICMDVIVDRGVLDCCQHW
        MME GLVPSGR EEETAEAYDINYE+SDEVERCGICMDVIVDRGVLDCCQHW
Subjt:  MMEVGLVPSGRPEEETAEAYDINYEISDEVERCGICMDVIVDRGVLDCCQHW
TrEMBL top hitse value%identityAlignment
A0A0A0KME1 Uncharacterized protein1.7e-1992.31Show/hide
Query:  MMEVGLVPSGRPEEETAEAYDINYEISDEVERCGICMDVIVDRGVLDCCQHW
        MMEVG VPSG PEEETAEAYDINYEIS+ VERCGICMDVIVDRGVLDCCQHW
Subjt:  MMEVGLVPSGRPEEETAEAYDINYEISDEVERCGICMDVIVDRGVLDCCQHW
A0A1S3ATZ1 uncharacterized protein At4g10930-like1.7e-1992.31Show/hide
Query:  MMEVGLVPSGRPEEETAEAYDINYEISDEVERCGICMDVIVDRGVLDCCQHW
        MMEVG VPSG  EEETAEAYDINYEIS+EVERCGICMDVIVDRGVLDCCQHW
Subjt:  MMEVGLVPSGRPEEETAEAYDINYEISDEVERCGICMDVIVDRGVLDCCQHW
A0A5D3C421 Zinc finger, RING-type1.7e-1992.31Show/hide
Query:  MMEVGLVPSGRPEEETAEAYDINYEISDEVERCGICMDVIVDRGVLDCCQHW
        MMEVG VPSG  EEETAEAYDINYEIS+EVERCGICMDVIVDRGVLDCCQHW
Subjt:  MMEVGLVPSGRPEEETAEAYDINYEISDEVERCGICMDVIVDRGVLDCCQHW
A0A6J1H3P9 uncharacterized protein At4g10930 isoform X17.7e-2092.31Show/hide
Query:  MMEVGLVPSGRPEEETAEAYDINYEISDEVERCGICMDVIVDRGVLDCCQHW
        MME GLVPSGR EEETAE YDINYE+SDEVERCGICMDVIVDRGVLDCCQHW
Subjt:  MMEVGLVPSGRPEEETAEAYDINYEISDEVERCGICMDVIVDRGVLDCCQHW
A0A6J1K854 uncharacterized protein At4g10930 isoform X13.4e-2092.31Show/hide
Query:  MMEVGLVPSGRPEEETAEAYDINYEISDEVERCGICMDVIVDRGVLDCCQHW
        MME GL+PSGR EEETAEAYDINYE+SDEVERCGICMDVIVDRGVLDCCQHW
Subjt:  MMEVGLVPSGRPEEETAEAYDINYEISDEVERCGICMDVIVDRGVLDCCQHW
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G10940.1 RING/U-box protein7.9e-0954.9Show/hide
Query:  MEVGLVPSGRPEEETAEAYDINYEISDEVERCGICMDVIVDRGVLDCCQHW
        ME+    S   E+E  E  + N     E ERCGICMD+I+DRGVLDCCQHW
Subjt:  MEVGLVPSGRPEEETAEAYDINYEISDEVERCGICMDVIVDRGVLDCCQHW

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATGGAGGTGGGTTTGGTTCCAAGTGGGAGACCGGAGGAAGAAACTGCAGAGGCTTATGATATCAATTATGAGATTTCTGACGAGGTGGAAAGATGTGGGATATGCAT
GGATGTTATCGTTGACAGGGGTGTTCTGGACTGCTGCCAACACTGGGAAGATGAGAAGCTCTTCTCTTTGCAGCTCGTTGAAACTTCCCAGGGTGCAAAATTTAGGCTGT
CGGAGGGAACACAGGAGCTCTTCTCACATTTTCTTGGTAGAAAAGCTCTCAAATCAAAGCGTGTGGTGACTAGTTCTGAGAAGATGTCTGTTGGCCTCGGTATGAAAACT
TTTGCAGAGATGGTCAAGGCTGAGGAGTCTAGCCAGGTTGTGGCCCATCTTGGCCACAACATGCTCTGCTGCCTTTGCCTTATCACATTGGTTAATGAAGCCATAGATTT
GGTGCTGAACTTCCTTTATCCATGGGGAACAAATTTCATTGATGGGATGAAATCCATTCCCTTGGAATTACCAAAAAGGTTTCCAATGGGATGTGAGGATGACCAATTAT
TACAAATGATAAAAGAGCCGGAGGATCACCTCATAGTGCTAGAGACCAACCAAAACTGTTCAATAAGACATCCCAAAAATTGGCAGCAAAGGAGCAAGATAGGAAGAGAT
GCCTCTGTGTTTTTGAGTCCCCTTCACAAAGGATGCACCAGCTGGGAGAGAGAGAAAGCTAAGGAGAATTCCTATGCAGGAGAGGAAGTTGTGAATGTTGATGGGCAGCA
CCATGTACCAACTGAAGGTTCCAATATGGATGACCAAAAGCATCTAGCAAAGTCATGTAATGAAGAGGTGGCTTTGAGATTCAGAGGCTTTCATACACATGGTACAACAA
GGAGGAAATAG
mRNA sequenceShow/hide mRNA sequence
ATGATGGAGGTGGGTTTGGTTCCAAGTGGGAGACCGGAGGAAGAAACTGCAGAGGCTTATGATATCAATTATGAGATTTCTGACGAGGTGGAAAGATGTGGGATATGCAT
GGATGTTATCGTTGACAGGGGTGTTCTGGACTGCTGCCAACACTGGGAAGATGAGAAGCTCTTCTCTTTGCAGCTCGTTGAAACTTCCCAGGGTGCAAAATTTAGGCTGT
CGGAGGGAACACAGGAGCTCTTCTCACATTTTCTTGGTAGAAAAGCTCTCAAATCAAAGCGTGTGGTGACTAGTTCTGAGAAGATGTCTGTTGGCCTCGGTATGAAAACT
TTTGCAGAGATGGTCAAGGCTGAGGAGTCTAGCCAGGTTGTGGCCCATCTTGGCCACAACATGCTCTGCTGCCTTTGCCTTATCACATTGGTTAATGAAGCCATAGATTT
GGTGCTGAACTTCCTTTATCCATGGGGAACAAATTTCATTGATGGGATGAAATCCATTCCCTTGGAATTACCAAAAAGGTTTCCAATGGGATGTGAGGATGACCAATTAT
TACAAATGATAAAAGAGCCGGAGGATCACCTCATAGTGCTAGAGACCAACCAAAACTGTTCAATAAGACATCCCAAAAATTGGCAGCAAAGGAGCAAGATAGGAAGAGAT
GCCTCTGTGTTTTTGAGTCCCCTTCACAAAGGATGCACCAGCTGGGAGAGAGAGAAAGCTAAGGAGAATTCCTATGCAGGAGAGGAAGTTGTGAATGTTGATGGGCAGCA
CCATGTACCAACTGAAGGTTCCAATATGGATGACCAAAAGCATCTAGCAAAGTCATGTAATGAAGAGGTGGCTTTGAGATTCAGAGGCTTTCATACACATGGTACAACAA
GGAGGAAATAG
Protein sequenceShow/hide protein sequence
MMEVGLVPSGRPEEETAEAYDINYEISDEVERCGICMDVIVDRGVLDCCQHWEDEKLFSLQLVETSQGAKFRLSEGTQELFSHFLGRKALKSKRVVTSSEKMSVGLGMKT
FAEMVKAEESSQVVAHLGHNMLCCLCLITLVNEAIDLVLNFLYPWGTNFIDGMKSIPLELPKRFPMGCEDDQLLQMIKEPEDHLIVLETNQNCSIRHPKNWQQRSKIGRD
ASVFLSPLHKGCTSWEREKAKENSYAGEEVVNVDGQHHVPTEGSNMDDQKHLAKSCNEEVALRFRGFHTHGTTRRK