; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0032619 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0032619
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionCCHC-type domain-containing protein
Genome locationchr11:35332141..35333507
RNA-Seq ExpressionLag0032619
SyntenyLag0032619
Gene Ontology termsNA
InterPro domainsIPR025558 - Domain of unknown function DUF4283


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_006484927.1 uncharacterized protein LOC102626623 [Citrus sinensis]3.9e-2133.33Show/hide
Query:  DELTERWKSLSLTTEETDVIALSGSEPLFSMESINLCLVDKVLTSRKINAEAFRNVMKNVWRTHRDTRVDFLGENVFVAKFKTTLEKNRVLRTGPWAFDK
        +EL  R K+++L  EE D +   G            CLV K+L +R +N E  R  M+  W+T ++ +V+ LG+N+FV KF T  +K RVL  GPW FDK
Subjt:  DELTERWKSLSLTTEETDVIALSGSEPLFSMESINLCLVDKVLTSRKINAEAFRNVMKNVWRTHRDTRVDFLGENVFVAKFKTTLEKNRVLRTGPWAFDK

Query:  SLIVLVTPTATDDPR----------------------------------QMREVETVAGGGADDWIGPVMRVRVSLDLNKPLQRGLMVRDTGDDEFVVPM
        +LIVLV P      +                                  Q+ EVET   G   + IGP  RVR+S+D+ KPL+R L+++  G+++ V+ +
Subjt:  SLIVLVTPTATDDPR----------------------------------QMREVETVAGGGADDWIGPVMRVRVSLDLNKPLQRGLMVRDTGDDEFVVPM

Query:  SSGSAPD
             PD
Subjt:  SSGSAPD

XP_022149484.1 uncharacterized protein LOC111017902 [Momordica charantia]1.2e-3534.41Show/hide
Query:  MDELTERWKSLSLTTEETDVIALSGSEPLFSMESINLCLVDKVLTSRKINAEAFRNVMKNVWRTHRDTRVDFLGENVFVAKFKTTLEKNRVLRTGPWAFD
        MDE+T+ W+    T +E + + +   +P+ + +++ LC+V K+ TS++I+AEA R+VMK+VWR H  TR + LG N++V  FK+  EK+RVL +GPW F+
Subjt:  MDELTERWKSLSLTTEETDVIALSGSEPLFSMESINLCLVDKVLTSRKINAEAFRNVMKNVWRTHRDTRVDFLGENVFVAKFKTTLEKNRVLRTGPWAFD

Query:  KSLIVLVTPTATDDPRQMR-------------------------------EVETVAGGGADDWIGPVMRVRVSLDLNKPLQRGLMVRDTGDDEFVVPMSS
        KSL+VL +PTAT+ P  M                                +VE + G GAD W GP +RVRV +D++KPL+RG+ ++++   +   P+  
Subjt:  KSLIVLVTPTATDDPRQMR-------------------------------EVETVAGGGADDWIGPVMRVRVSLDLNKPLQRGLMVRDTGDDEFVVPMSS

Query:  GSAPD-------------------------RSEQYGSWLRADYIDGS
           PD                           EQYG WLRA  +  S
Subjt:  GSAPD-------------------------RSEQYGSWLRADYIDGS

XP_022155933.1 uncharacterized protein LOC111022932 [Momordica charantia]7.5e-3339.9Show/hide
Query:  MDELTERWKSLSLTTEETDVIALSGSEPLFSMESINLCLVDKVLTSRKINAEAFRNVMKNVWRTHRDTRVDFLGENVFVAKFKTTLEKNRVLRTGPWAFD
        MDE+TE W++ +LT E+ + I +   +PL + E++    V K+ TS++I+ EAFR+VMK++W+ H  T ++  G N++V  FK+  EKNRVL +GPW+F+
Subjt:  MDELTERWKSLSLTTEETDVIALSGSEPLFSMESINLCLVDKVLTSRKINAEAFRNVMKNVWRTHRDTRVDFLGENVFVAKFKTTLEKNRVLRTGPWAFD

Query:  KSLIVLVTPTATDDPRQMR-------------------------------EVETVAGGGADDWIGPVMRVRVSLDLNKPLQRGLMVRDTGDDE
         SL+VL +PTATD PR M                                EVE +   G+ +W GP +RVRV +D++KP +RGL VR TGD++
Subjt:  KSLIVLVTPTATDDPRQMR-------------------------------EVETVAGGGADDWIGPVMRVRVSLDLNKPLQRGLMVRDTGDDE

XP_022156711.1 uncharacterized protein LOC111023555 [Momordica charantia]1.1e-2835.12Show/hide
Query:  MDELTERWKSLSLTTEETDVIALSGSEPLFSMESINLCLVDKVLTSRKINAEAFRNVMKNVWRTHRDTRVDFLGENVFVAKFKTTLEKNRVLRTGPWAFD
        MD++T+ W++ +L  EE D I +   +P+ ++++I LC V K+  S++I  EAF +VMK VW+ H  TR++  G N++V  FKT  EK RV   GPW FD
Subjt:  MDELTERWKSLSLTTEETDVIALSGSEPLFSMESINLCLVDKVLTSRKINAEAFRNVMKNVWRTHRDTRVDFLGENVFVAKFKTTLEKNRVLRTGPWAFD

Query:  KSLIVLVTPTATDDP-------------------------------RQMREVETVAGGGADDWIGPVMRVRVSLDLNKPLQRGLMVRDTGDDEFVVPMSS
        KSL++LV  TA + P                                ++ EVE V G  + DW+ P + VRV +++ KPL+RGL V+ +   +   P+  
Subjt:  KSLIVLVTPTATDDP-------------------------------RQMREVETVAGGGADDWIGPVMRVRVSLDLNKPLQRGLMVRDTGDDEFVVPMSS

Query:  GSAPD
           PD
Subjt:  GSAPD

XP_022158119.1 uncharacterized protein LOC111024676, partial [Momordica charantia]5.8e-2549.57Show/hide
Query:  MDELTERWKSLSLTTEETDVIALSGSEPLFSMESINLCLVDKVLTSRKINAEAFRNVMKNVWRTHRDTRVDFLGENVFVAKFKTTLEKNRVLRTGPWAFD
        MDE+TE W++ +LT EE +   +   +P+ + E+I LC V K+ TS++I+A+A  +VMK VW+ H  TR++  G N++V  FKT +EK RVL +GPW FD
Subjt:  MDELTERWKSLSLTTEETDVIALSGSEPLFSMESINLCLVDKVLTSRKINAEAFRNVMKNVWRTHRDTRVDFLGENVFVAKFKTTLEKNRVLRTGPWAFD

Query:  KSLIVLVTPTATDDP
        KSL VLV+PTA D P
Subjt:  KSLIVLVTPTATDDP

TrEMBL top hitse value%identityAlignment
A0A314Z5A5 DUF4283 domain-containing protein2.1e-2027.93Show/hide
Query:  KSLSLTTEETDVIALSGSEPLFSMESINLCLVDKVLTSRKINAEAFRNVMKNVWRTHRDTRVDFLGENVFVAKFKTTLEKNRVLRTGPWAFDKSLIVLVT
        K L LT EETDV+ +  ++     E +   LV KVLT+   N EAF+  M  +W T R+ R   LGEN+F+  F T L++NRVLR GPW FDK+L++L  
Subjt:  KSLSLTTEETDVIALSGSEPLFSMESINLCLVDKVLTSRKINAEAFRNVMKNVWRTHRDTRVDFLGENVFVAKFKTTLEKNRVLRTGPWAFDKSLIVLVT

Query:  PTATDDPRQM------------------------REVETVAG-------GGADDWIGPVMRVRVSLDLNKPLQRGLMVRDTGDDEFVVPMSSGSAPDRSE
        P     P +M                        R++    G       G   + +G  +RVRV +D+ KPL+RG  +         +P        + +
Subjt:  PTATDDPRQM------------------------REVETVAG-------GGADDWIGPVMRVRVSLDLNKPLQRGLMVRDTGDDEFVVPMSSGSAPDRSE

Query:  QYGSWLRADYIDGSQTMRSNPVRENQSSPGGVNGGLADPQ---TSGPSVTDETAATGVPLPASQPPAPAVE------ESHPISTGIGTQLT-PASVLAVM
         YGS+LR  + D ++   ++P R +       N G A  Q    SG S+ D     G      + P P  E      + H +S+G G ++T P    A  
Subjt:  QYGSWLRADYIDGSQTMRSNPVRENQSSPGGVNGGLADPQ---TSGPSVTDETAATGVPLPASQPPAPAVE------ESHPISTGIGTQLT-PASVLAVM

Query:  VTVVDPLQDGARVTTKGKGKLLGPSTESGEGPMIDPLSPV-----MGLDPVVPLRKESWKRKARGSHK---DNMVVD----------SDPPSDSRKRRLP
            + LQ   R+      +  G  ++S       PLSP      + +D +    K   K K   S+    DN +            +  P D   +RLP
Subjt:  VTVVDPLQDGARVTTKGKGKLLGPSTESGEGPMIDPLSPV-----MGLDPVVPLRKESWKRKARGSHK---DNMVVD----------SDPPSDSRKRRLP

Query:  E
        +
Subjt:  E

A0A6J1D765 uncharacterized protein LOC1110179026.0e-3634.41Show/hide
Query:  MDELTERWKSLSLTTEETDVIALSGSEPLFSMESINLCLVDKVLTSRKINAEAFRNVMKNVWRTHRDTRVDFLGENVFVAKFKTTLEKNRVLRTGPWAFD
        MDE+T+ W+    T +E + + +   +P+ + +++ LC+V K+ TS++I+AEA R+VMK+VWR H  TR + LG N++V  FK+  EK+RVL +GPW F+
Subjt:  MDELTERWKSLSLTTEETDVIALSGSEPLFSMESINLCLVDKVLTSRKINAEAFRNVMKNVWRTHRDTRVDFLGENVFVAKFKTTLEKNRVLRTGPWAFD

Query:  KSLIVLVTPTATDDPRQMR-------------------------------EVETVAGGGADDWIGPVMRVRVSLDLNKPLQRGLMVRDTGDDEFVVPMSS
        KSL+VL +PTAT+ P  M                                +VE + G GAD W GP +RVRV +D++KPL+RG+ ++++   +   P+  
Subjt:  KSLIVLVTPTATDDPRQMR-------------------------------EVETVAGGGADDWIGPVMRVRVSLDLNKPLQRGLMVRDTGDDEFVVPMSS

Query:  GSAPD-------------------------RSEQYGSWLRADYIDGS
           PD                           EQYG WLRA  +  S
Subjt:  GSAPD-------------------------RSEQYGSWLRADYIDGS

A0A6J1DP89 uncharacterized protein LOC1110229323.6e-3339.9Show/hide
Query:  MDELTERWKSLSLTTEETDVIALSGSEPLFSMESINLCLVDKVLTSRKINAEAFRNVMKNVWRTHRDTRVDFLGENVFVAKFKTTLEKNRVLRTGPWAFD
        MDE+TE W++ +LT E+ + I +   +PL + E++    V K+ TS++I+ EAFR+VMK++W+ H  T ++  G N++V  FK+  EKNRVL +GPW+F+
Subjt:  MDELTERWKSLSLTTEETDVIALSGSEPLFSMESINLCLVDKVLTSRKINAEAFRNVMKNVWRTHRDTRVDFLGENVFVAKFKTTLEKNRVLRTGPWAFD

Query:  KSLIVLVTPTATDDPRQMR-------------------------------EVETVAGGGADDWIGPVMRVRVSLDLNKPLQRGLMVRDTGDDE
         SL+VL +PTATD PR M                                EVE +   G+ +W GP +RVRV +D++KP +RGL VR TGD++
Subjt:  KSLIVLVTPTATDDPRQMR-------------------------------EVETVAGGGADDWIGPVMRVRVSLDLNKPLQRGLMVRDTGDDE

A0A6J1DVS4 uncharacterized protein LOC1110235555.4e-2935.12Show/hide
Query:  MDELTERWKSLSLTTEETDVIALSGSEPLFSMESINLCLVDKVLTSRKINAEAFRNVMKNVWRTHRDTRVDFLGENVFVAKFKTTLEKNRVLRTGPWAFD
        MD++T+ W++ +L  EE D I +   +P+ ++++I LC V K+  S++I  EAF +VMK VW+ H  TR++  G N++V  FKT  EK RV   GPW FD
Subjt:  MDELTERWKSLSLTTEETDVIALSGSEPLFSMESINLCLVDKVLTSRKINAEAFRNVMKNVWRTHRDTRVDFLGENVFVAKFKTTLEKNRVLRTGPWAFD

Query:  KSLIVLVTPTATDDP-------------------------------RQMREVETVAGGGADDWIGPVMRVRVSLDLNKPLQRGLMVRDTGDDEFVVPMSS
        KSL++LV  TA + P                                ++ EVE V G  + DW+ P + VRV +++ KPL+RGL V+ +   +   P+  
Subjt:  KSLIVLVTPTATDDP-------------------------------RQMREVETVAGGGADDWIGPVMRVRVSLDLNKPLQRGLMVRDTGDDEFVVPMSS

Query:  GSAPD
           PD
Subjt:  GSAPD

A0A6J1DYG3 uncharacterized protein LOC1110246762.8e-2549.57Show/hide
Query:  MDELTERWKSLSLTTEETDVIALSGSEPLFSMESINLCLVDKVLTSRKINAEAFRNVMKNVWRTHRDTRVDFLGENVFVAKFKTTLEKNRVLRTGPWAFD
        MDE+TE W++ +LT EE +   +   +P+ + E+I LC V K+ TS++I+A+A  +VMK VW+ H  TR++  G N++V  FKT +EK RVL +GPW FD
Subjt:  MDELTERWKSLSLTTEETDVIALSGSEPLFSMESINLCLVDKVLTSRKINAEAFRNVMKNVWRTHRDTRVDFLGENVFVAKFKTTLEKNRVLRTGPWAFD

Query:  KSLIVLVTPTATDDP
        KSL VLV+PTA D P
Subjt:  KSLIVLVTPTATDDP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACGAGAGTGATGGACGAGCTTACAGAGAGATGGAAAAGTCTTTCACTTACGACGGAGGAGACAGATGTAATTGCTTTGTCTGGTTCCGAGCCCCTATTTTCGATGGA
ATCTATCAATCTTTGTTTGGTGGACAAGGTTCTGACGAGCCGAAAGATTAATGCTGAGGCTTTTCGTAACGTTATGAAAAATGTTTGGCGAACTCATCGAGATACTCGTG
TGGATTTTCTTGGTGAGAACGTCTTTGTGGCTAAGTTCAAGACTACCCTGGAAAAGAATCGTGTGCTCCGAACGGGCCCTTGGGCCTTTGACAAAAGCTTGATCGTGTTG
GTGACCCCAACGGCGACGGATGACCCTCGACAAATGAGGGAGGTCGAGACTGTTGCTGGTGGGGGTGCAGACGATTGGATTGGCCCGGTCATGCGAGTTAGGGTCTCTCT
AGATTTGAACAAGCCGCTCCAACGAGGTCTTATGGTTCGTGATACGGGTGACGACGAGTTTGTTGTGCCCATGTCGTCGGGGAGTGCACCGGATCGTTCTGAGCAGTATG
GATCGTGGCTCCGAGCGGACTACATCGACGGGTCACAAACTATGCGAAGCAATCCTGTGCGGGAAAACCAGTCGTCGCCTGGTGGGGTTAATGGCGGGCTTGCAGATCCA
CAAACTTCGGGACCGTCGGTGACAGATGAAACGGCGGCTACTGGTGTTCCACTGCCGGCTAGTCAACCGCCAGCGCCTGCTGTTGAGGAAAGTCATCCGATTTCTACGGG
TATAGGTACGCAATTGACGCCCGCGTCTGTTCTGGCGGTTATGGTTACGGTTGTTGATCCCTTGCAGGATGGAGCTCGTGTGACAACAAAGGGTAAAGGAAAGTTATTGG
GCCCATCTACTGAGTCTGGGGAGGGCCCAATGATTGACCCTTTATCTCCTGTGATGGGCTTGGACCCAGTGGTTCCCCTTCGAAAAGAAAGTTGGAAGCGTAAGGCGAGG
GGGTCCCACAAGGATAATATGGTGGTTGACTCGGATCCTCCCTCTGATTCGCGTAAACGTCGATTGCCAGAAACATTAGGACCTCATTCGGATAATGGCCAGAAGCGGCT
GCGGGGGACGACTGAAGATGTTGCATTGGGGATTACTGACACAGTTTCTATATCTTTATCGGCGGAGGCTGGATCCCAGCCCCACCGCTCAGCATGA
mRNA sequenceShow/hide mRNA sequence
ATGACGAGAGTGATGGACGAGCTTACAGAGAGATGGAAAAGTCTTTCACTTACGACGGAGGAGACAGATGTAATTGCTTTGTCTGGTTCCGAGCCCCTATTTTCGATGGA
ATCTATCAATCTTTGTTTGGTGGACAAGGTTCTGACGAGCCGAAAGATTAATGCTGAGGCTTTTCGTAACGTTATGAAAAATGTTTGGCGAACTCATCGAGATACTCGTG
TGGATTTTCTTGGTGAGAACGTCTTTGTGGCTAAGTTCAAGACTACCCTGGAAAAGAATCGTGTGCTCCGAACGGGCCCTTGGGCCTTTGACAAAAGCTTGATCGTGTTG
GTGACCCCAACGGCGACGGATGACCCTCGACAAATGAGGGAGGTCGAGACTGTTGCTGGTGGGGGTGCAGACGATTGGATTGGCCCGGTCATGCGAGTTAGGGTCTCTCT
AGATTTGAACAAGCCGCTCCAACGAGGTCTTATGGTTCGTGATACGGGTGACGACGAGTTTGTTGTGCCCATGTCGTCGGGGAGTGCACCGGATCGTTCTGAGCAGTATG
GATCGTGGCTCCGAGCGGACTACATCGACGGGTCACAAACTATGCGAAGCAATCCTGTGCGGGAAAACCAGTCGTCGCCTGGTGGGGTTAATGGCGGGCTTGCAGATCCA
CAAACTTCGGGACCGTCGGTGACAGATGAAACGGCGGCTACTGGTGTTCCACTGCCGGCTAGTCAACCGCCAGCGCCTGCTGTTGAGGAAAGTCATCCGATTTCTACGGG
TATAGGTACGCAATTGACGCCCGCGTCTGTTCTGGCGGTTATGGTTACGGTTGTTGATCCCTTGCAGGATGGAGCTCGTGTGACAACAAAGGGTAAAGGAAAGTTATTGG
GCCCATCTACTGAGTCTGGGGAGGGCCCAATGATTGACCCTTTATCTCCTGTGATGGGCTTGGACCCAGTGGTTCCCCTTCGAAAAGAAAGTTGGAAGCGTAAGGCGAGG
GGGTCCCACAAGGATAATATGGTGGTTGACTCGGATCCTCCCTCTGATTCGCGTAAACGTCGATTGCCAGAAACATTAGGACCTCATTCGGATAATGGCCAGAAGCGGCT
GCGGGGGACGACTGAAGATGTTGCATTGGGGATTACTGACACAGTTTCTATATCTTTATCGGCGGAGGCTGGATCCCAGCCCCACCGCTCAGCATGA
Protein sequenceShow/hide protein sequence
MTRVMDELTERWKSLSLTTEETDVIALSGSEPLFSMESINLCLVDKVLTSRKINAEAFRNVMKNVWRTHRDTRVDFLGENVFVAKFKTTLEKNRVLRTGPWAFDKSLIVL
VTPTATDDPRQMREVETVAGGGADDWIGPVMRVRVSLDLNKPLQRGLMVRDTGDDEFVVPMSSGSAPDRSEQYGSWLRADYIDGSQTMRSNPVRENQSSPGGVNGGLADP
QTSGPSVTDETAATGVPLPASQPPAPAVEESHPISTGIGTQLTPASVLAVMVTVVDPLQDGARVTTKGKGKLLGPSTESGEGPMIDPLSPVMGLDPVVPLRKESWKRKAR
GSHKDNMVVDSDPPSDSRKRRLPETLGPHSDNGQKRLRGTTEDVALGITDTVSISLSAEAGSQPHRSA