; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0032639 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0032639
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationchr11:35560068..35562074
RNA-Seq ExpressionLag0032639
SyntenyLag0032639
Gene Ontology termsNA
InterPro domainsIPR026960 - Reverse transcriptase zinc-binding domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022150918.1 uncharacterized protein LOC111018954 [Momordica charantia]8.2e-9547.33Show/hide
Query:  VKDVLQVNYTESLGQYLGLPSQNARNKKEIFNNIKNRVWKALQGWKGRLFSAAGREILIKAVAQAIPNYAMSCFKFPVTLTNELNSMCARFWWGSGEVHR
        ++++L VN  E   QYLGLP+   RN++  FN IK+RVWK LQGWK +LFS  G+E+LIKAVAQAIP Y MSCF+ P  L  E + + ARFWWGS +  +
Subjt:  VKDVLQVNYTESLGQYLGLPSQNARNKKEIFNNIKNRVWKALQGWKGRLFSAAGREILIKAVAQAIPNYAMSCFKFPVTLTNELNSMCARFWWGSGEVHR

Query:  KIHWRSWKKLCIHKAQGGMGFRDLTIFNQAMLAKQSWRIVCNSNSLLTRVLRGRYFKTGHFLKAKLGSNPSYTWRSIIWGRELFKKGYRWRVGNGLLVEA
        KIHW +W  L + K +GGMGFRDL +FN+A+LAKQ WRI+ + NS+L+RVL+GRYFK   F++AK+  NPSY WRSI+WGR+L KKG RWR+GNG  V  
Subjt:  KIHWRSWKKLCIHKAQGGMGFRDLTIFNQAMLAKQSWRIVCNSNSLLTRVLRGRYFKTGHFLKAKLGSNPSYTWRSIIWGRELFKKGYRWRVGNGLLVEA

Query:  ATDPWIPREGPSTPILAN-RNAKNYTVAQLLDTNR-VWREDLIRDLFLDRDAADILNIPISQHNSEDSILWDPDSKGMFTVRSAYRLGFSLQNAADA-SS
          D W+P + P+  IL++ R      V+ L+D     W+ D++RD F   +A  IL+IPI +   ED ++W+ +  G+++VRS Y++         A SS
Subjt:  ATDPWIPREGPSTPILAN-RNAKNYTVAQLLDTNR-VWREDLIRDLFLDRDAADILNIPISQHNSEDSILWDPDSKGMFTVRSAYRLGFSLQNAADA-SS

Query:  SGYGFKESMWKQFWNIKAPAKIKVCGWKIYNDLLPTKTNLINRGFDINSSCLFCRNHPETLKHLLWECKLSKDL
        S        W  FW +  P KIKV  W++  D LPT  NL  RG +I + C FC  + E   HL W CK ++ L
Subjt:  SGYGFKESMWKQFWNIKAPAKIKVCGWKIYNDLLPTKTNLINRGFDINSSCLFCRNHPETLKHLLWECKLSKDL

XP_022155286.1 uncharacterized protein LOC111022423 [Momordica charantia]1.2e-9052.16Show/hide
Query:  RNKKEIFNNIKNRVWKALQGWKGRLFSAAGREILIKAVAQAIPNYAMSCFKFPVTLTNELNSMCARFWWGSGEVHRKIHWRSWKKLCIHKAQGGMGFRDL
        +++ EIF+ I +RVWK LQGWKG+LFS  G+E+LIK VAQAIPNY +SCFK PV++ NEL+ +  RFWWGS    RKIHW+SWK LCI K  GGMGFRD+
Subjt:  RNKKEIFNNIKNRVWKALQGWKGRLFSAAGREILIKAVAQAIPNYAMSCFKFPVTLTNELNSMCARFWWGSGEVHRKIHWRSWKKLCIHKAQGGMGFRDL

Query:  TIFNQAMLAKQSWRIVCNSNSLLTRVLRGRYFKTGHFLKAKLGSNPSYTWRSIIWGRELFKKGYRWRVGNGLLVEAATDPWIPREGPSTPILANRNAKNY
        +IFNQAMLAKQSWRI+ + +SLL + LRG+YFKTG FL+AKLG+ PSY WRSI+WGR+LFKKGYRW+VGNG  +  ++DPW+PR+G  +P+  + + +N+
Subjt:  TIFNQAMLAKQSWRIVCNSNSLLTRVLRGRYFKTGHFLKAKLGSNPSYTWRSIIWGRELFKKGYRWRVGNGLLVEAATDPWIPREGPSTPILANRNAKNY

Query:  TVAQLLDTNRVWREDLIRDLFLDRDAADILNIPISQHNSEDSILWDPDSKGMFTVRSAYRLGFSLQNAADASSSGYGFKESMWKQFWNIKAPAKIKVCGW
        +VA L++    W E  +R+ F+  +A  IL  P+   + +D I+W  D  G+F+VRSAY LG  L             K S+ + F  +  P K + C  
Subjt:  TVAQLLDTNRVWREDLIRDLFLDRDAADILNIPISQHNSEDSILWDPDSKGMFTVRSAYRLGFSLQNAADASSSGYGFKESMWKQFWNIKAPAKIKVCGW

Query:  K
        K
Subjt:  K

XP_030483481.1 uncharacterized protein LOC115700065 [Cannabis sativa]4.6e-9042.89Show/hide
Query:  SPNTNTDLVQRVKDVLQVNYTESLGQYLGLPSQNARNKKEIFNNIKNRVWKALQGWKGRLFSAAGREILIKAVAQAIPNYAMSCFKFPVTLTNELNSMCA
        SPNT      +   VL +  +E   +YLGLP+   R+K+++F+ IK +VW+ ++ W  ++FS  G+EIL+KAV Q+IP Y MSCFK P+TL N+L +M +
Subjt:  SPNTNTDLVQRVKDVLQVNYTESLGQYLGLPSQNARNKKEIFNNIKNRVWKALQGWKGRLFSAAGREILIKAVAQAIPNYAMSCFKFPVTLTNELNSMCA

Query:  RFWWGSGEVHRKIHWRSWKKLCIHKAQGGMGFRDLTIFNQAMLAKQSWRIVCNSNSLLTRVLRGRYFKTGHFLKAKLGSNPSYTWRSIIWGRELFKKGYR
         FWWGS E   KIHWRSWK LC  K  GGMGFR    +NQA+LAKQ+WR++ N +SLL+R+L+ RYF    FL+A  G +PS TW+ I+ GREL + G R
Subjt:  RFWWGSGEVHRKIHWRSWKKLCIHKAQGGMGFRDLTIFNQAMLAKQSWRIVCNSNSLLTRVLRGRYFKTGHFLKAKLGSNPSYTWRSIIWGRELFKKGYR

Query:  WRVGNGLLVEAATDPWIPREGPSTPILANRNAKNYTVAQLLDTNRVWREDLIRDLFLDRDAADILNIPISQHNSEDSILWDPDSKGMFTVRSAYRLGFSL
        W+VG G  +  ATDPWIP      PI       N  VA L+  +R W + L+ + F   D   IL IP+S  ++ D ++W   S G++ V S Y    SL
Subjt:  WRVGNGLLVEAATDPWIPREGPSTPILANRNAKNYTVAQLLDTNRVWREDLIRDLFLDRDAADILNIPISQHNSEDSILWDPDSKGMFTVRSAYRLGFSL

Query:  QNAADASSSGYGFKESMWKQFWNIKAPAKIKVCGWKIYNDLLPTKTNLINRGFDINSSCLFCRNHPETLKHLLWECKLSK
        +++  +S+S      + WK FW ++ P KIK+  W++++D LP  T+L+ R    +S+C  CR   E++ H L+ CK +K
Subjt:  QNAADASSSGYGFKESMWKQFWNIKAPAKIKVCGWKIYNDLLPTKTNLINRGFDINSSCLFCRNHPETLKHLLWECKLSK

XP_030508852.1 uncharacterized protein LOC115723496 [Cannabis sativa]1.0e-8943.21Show/hide
Query:  KDVLQVNYTESLGQYLGLPSQNARNKKEIFNNIKNRVWKALQGWKGRLFSAAGREILIKAVAQAIPNYAMSCFKFPVTLTNELNSMCARFWWGSGEVHRK
        KD+L +       QYLGLPS + +NKK++F  I +++WK L  WK  LFSA G+E+L+KAV QAIP YAMSCF+ PVTL +++ SM ARFWWGS    + 
Subjt:  KDVLQVNYTESLGQYLGLPSQNARNKKEIFNNIKNRVWKALQGWKGRLFSAAGREILIKAVAQAIPNYAMSCFKFPVTLTNELNSMCARFWWGSGEVHRK

Query:  IHWRSWKKLCIHKAQGGMGFRDLTIFNQAMLAKQSWRIVCNSNSLLTRVLRGRYFKTGHFLKAKLGSNPSYTWRSIIWGRELFKKGYRWRVGNGLLVEAA
        IHW++W  LC  K QGG+GFR+   FNQA+LAKQ+WRI+   NSLL+ +LR RYF  G++L A LGSNPS TWRS++WG+EL  KG RWRVG+G  +   
Subjt:  IHWRSWKKLCIHKAQGGMGFRDLTIFNQAMLAKQSWRIVCNSNSLLTRVLRGRYFKTGHFLKAKLGSNPSYTWRSIIWGRELFKKGYRWRVGNGLLVEAA

Query:  TDPWIPREGPSTPILANRNAKNYTVAQLLDTNRVWREDLIRDLFLDRDAADILNIPISQHNSEDSILWDPDSKGMFTVRSAYRLGFSLQNAADASSSGYG
        TD W+P      P        N  VA L+  +R W    +   F   D   +L+IP+S +  +D ++W+    G++ V+S Y    SL    D++ S   
Subjt:  TDPWIPREGPSTPILANRNAKNYTVAQLLDTNRVWREDLIRDLFLDRDAADILNIPISQHNSEDSILWDPDSKGMFTVRSAYRLGFSLQNAADASSSGYG

Query:  FKESMWKQFWNIKAPAKIKVCGWKIYNDLLPTKTNLINRGFDINSSCLFCRNHPETLKHLLWECKLSK
          E  W  FW +K P K+++  WK+++  LP    L  R    +  C  C +  ET+ H L+ C  +K
Subjt:  FKESMWKQFWNIKAPAKIKVCGWKIYNDLLPTKTNLINRGFDINSSCLFCRNHPETLKHLLWECKLSK

XP_030509050.1 uncharacterized protein LOC115723712 [Cannabis sativa]1.8e-8938.93Show/hide
Query:  SPNTNTDLVQRVKDVLQVNYTESLGQYLGLPSQNARNKKEIFNNIKNRVWKALQGWKGRLFSAAGREILIKAVAQAIPNYAMSCFKFPVTLTNELNSMCA
        SPNT T      + +L +       QYLGLPS + R+K ++F+ I +++WK +  W+ +LFS  G+E+L+KAV QAIP YAMSCF+ PV L N++  + +
Subjt:  SPNTNTDLVQRVKDVLQVNYTESLGQYLGLPSQNARNKKEIFNNIKNRVWKALQGWKGRLFSAAGREILIKAVAQAIPNYAMSCFKFPVTLTNELNSMCA

Query:  RFWWGSGEVHRKIHWRSWKKLCIHKAQGGMGFRDLTIFNQAMLAKQSWRIVCNSNSLLTRVLRGRYFKTGHFLKAKLGSNPSYTWRSIIWGRELFKKGYR
        RFWWG       IHW++WK LC  K  GGMGFR+   FNQA+LAKQ+WRI+ + +SL+ RVL+ RYF TG FL+A  G+ PS TW+SI+WG+EL  KG R
Subjt:  RFWWGSGEVHRKIHWRSWKKLCIHKAQGGMGFRDLTIFNQAMLAKQSWRIVCNSNSLLTRVLRGRYFKTGHFLKAKLGSNPSYTWRSIIWGRELFKKGYR

Query:  WRVGNGLLVEAATDPWIPREGPSTPILANRNAKNYTVAQLLDTNRVWREDLIRDLFLDRDAADILNIPISQHNSEDSILWDPDSKGMFTVRSAYRLGFSL
        WR+G+G  V   + PWIP      P+L     ++  VA  +  +R W    ++  F   D   IL+IP+S    ED +LW   S G +TV+S Y+L    
Subjt:  WRVGNGLLVEAATDPWIPREGPSTPILANRNAKNYTVAQLLDTNRVWREDLIRDLFLDRDAADILNIPISQHNSEDSILWDPDSKGMFTVRSAYRLGFSL

Query:  QNAADASSSGYGFKESMWKQFWNIKAPAKIKVCGWKIYNDLLPTKTNLINRGFDINSSCLFCRNHPETLKHLLWECKLSKDLVQRVKDVL--QVNYTESL
         +  D+  +     E+ W+ FW +K P+KI++  W+ Y++ LPT   L  R    +  C  C+ H ET+ H  + C  +K + +   + +   ++ T S 
Subjt:  QNAADASSSGYGFKESMWKQFWNIKAPAKIKVCGWKIYNDLLPTKTNLINRGFDINSSCLFCRNHPETLKHLLWECKLSKDLVQRVKDVL--QVNYTESL

Query:  GQYL-GLPSQNARNKKEIFNNIKNRVWKA
          +L  + SQ    K E+F      +W A
Subjt:  GQYL-GLPSQNARNKKEIFNNIKNRVWKA

TrEMBL top hitse value%identityAlignment
A0A6J1DAR4 uncharacterized protein LOC1110189544.0e-9547.33Show/hide
Query:  VKDVLQVNYTESLGQYLGLPSQNARNKKEIFNNIKNRVWKALQGWKGRLFSAAGREILIKAVAQAIPNYAMSCFKFPVTLTNELNSMCARFWWGSGEVHR
        ++++L VN  E   QYLGLP+   RN++  FN IK+RVWK LQGWK +LFS  G+E+LIKAVAQAIP Y MSCF+ P  L  E + + ARFWWGS +  +
Subjt:  VKDVLQVNYTESLGQYLGLPSQNARNKKEIFNNIKNRVWKALQGWKGRLFSAAGREILIKAVAQAIPNYAMSCFKFPVTLTNELNSMCARFWWGSGEVHR

Query:  KIHWRSWKKLCIHKAQGGMGFRDLTIFNQAMLAKQSWRIVCNSNSLLTRVLRGRYFKTGHFLKAKLGSNPSYTWRSIIWGRELFKKGYRWRVGNGLLVEA
        KIHW +W  L + K +GGMGFRDL +FN+A+LAKQ WRI+ + NS+L+RVL+GRYFK   F++AK+  NPSY WRSI+WGR+L KKG RWR+GNG  V  
Subjt:  KIHWRSWKKLCIHKAQGGMGFRDLTIFNQAMLAKQSWRIVCNSNSLLTRVLRGRYFKTGHFLKAKLGSNPSYTWRSIIWGRELFKKGYRWRVGNGLLVEA

Query:  ATDPWIPREGPSTPILAN-RNAKNYTVAQLLDTNR-VWREDLIRDLFLDRDAADILNIPISQHNSEDSILWDPDSKGMFTVRSAYRLGFSLQNAADA-SS
          D W+P + P+  IL++ R      V+ L+D     W+ D++RD F   +A  IL+IPI +   ED ++W+ +  G+++VRS Y++         A SS
Subjt:  ATDPWIPREGPSTPILAN-RNAKNYTVAQLLDTNR-VWREDLIRDLFLDRDAADILNIPISQHNSEDSILWDPDSKGMFTVRSAYRLGFSLQNAADA-SS

Query:  SGYGFKESMWKQFWNIKAPAKIKVCGWKIYNDLLPTKTNLINRGFDINSSCLFCRNHPETLKHLLWECKLSKDL
        S        W  FW +  P KIKV  W++  D LPT  NL  RG +I + C FC  + E   HL W CK ++ L
Subjt:  SGYGFKESMWKQFWNIKAPAKIKVCGWKIYNDLLPTKTNLINRGFDINSSCLFCRNHPETLKHLLWECKLSKDL

A0A6J1DRA0 uncharacterized protein LOC1110224235.9e-9152.16Show/hide
Query:  RNKKEIFNNIKNRVWKALQGWKGRLFSAAGREILIKAVAQAIPNYAMSCFKFPVTLTNELNSMCARFWWGSGEVHRKIHWRSWKKLCIHKAQGGMGFRDL
        +++ EIF+ I +RVWK LQGWKG+LFS  G+E+LIK VAQAIPNY +SCFK PV++ NEL+ +  RFWWGS    RKIHW+SWK LCI K  GGMGFRD+
Subjt:  RNKKEIFNNIKNRVWKALQGWKGRLFSAAGREILIKAVAQAIPNYAMSCFKFPVTLTNELNSMCARFWWGSGEVHRKIHWRSWKKLCIHKAQGGMGFRDL

Query:  TIFNQAMLAKQSWRIVCNSNSLLTRVLRGRYFKTGHFLKAKLGSNPSYTWRSIIWGRELFKKGYRWRVGNGLLVEAATDPWIPREGPSTPILANRNAKNY
        +IFNQAMLAKQSWRI+ + +SLL + LRG+YFKTG FL+AKLG+ PSY WRSI+WGR+LFKKGYRW+VGNG  +  ++DPW+PR+G  +P+  + + +N+
Subjt:  TIFNQAMLAKQSWRIVCNSNSLLTRVLRGRYFKTGHFLKAKLGSNPSYTWRSIIWGRELFKKGYRWRVGNGLLVEAATDPWIPREGPSTPILANRNAKNY

Query:  TVAQLLDTNRVWREDLIRDLFLDRDAADILNIPISQHNSEDSILWDPDSKGMFTVRSAYRLGFSLQNAADASSSGYGFKESMWKQFWNIKAPAKIKVCGW
        +VA L++    W E  +R+ F+  +A  IL  P+   + +D I+W  D  G+F+VRSAY LG  L             K S+ + F  +  P K + C  
Subjt:  TVAQLLDTNRVWREDLIRDLFLDRDAADILNIPISQHNSEDSILWDPDSKGMFTVRSAYRLGFSLQNAADASSSGYGFKESMWKQFWNIKAPAKIKVCGW

Query:  K
        K
Subjt:  K

A0A803QBU0 Uncharacterized protein1.3e-9344.74Show/hide
Query:  SPNTNTDLVQRVKDVLQVNYTESLGQYLGLPSQNARNKKEIFNNIKNRVWKALQGWKGRLFSAAGREILIKAVAQAIPNYAMSCFKFPVTLTNELNSMCA
        SPNT           L +  +E   +YLGLPS + R+KKE+F+NIK R+WK +Q W  +LFSA GRE+L+KAV Q+IP YAMSCF+ PV   N+L SM +
Subjt:  SPNTNTDLVQRVKDVLQVNYTESLGQYLGLPSQNARNKKEIFNNIKNRVWKALQGWKGRLFSAAGREILIKAVAQAIPNYAMSCFKFPVTLTNELNSMCA

Query:  RFWWGSGEVHRKIHWRSWKKLCIHKAQGGMGFRDLTIFNQAMLAKQSWRIVCNSNSLLTRVLRGRYFKTGHFLKAKLGSNPSYTWRSIIWGRELFKKGYR
         FWWG  E   KIHWRSW   C  K +GGMGFR    FNQA+LAKQ+WR+V N  SLL  +L+ +YF    FL A +G +PS TW+ I WGREL  KG R
Subjt:  RFWWGSGEVHRKIHWRSWKKLCIHKAQGGMGFRDLTIFNQAMLAKQSWRIVCNSNSLLTRVLRGRYFKTGHFLKAKLGSNPSYTWRSIIWGRELFKKGYR

Query:  WRVGNGLLVEAATDPWIPREGPSTPILANRNAKNYTVAQLLDTNRVWREDLIRDLFLDRDAADILNIPISQHNSEDSILWDPDSKGMFTVRSAYRLGFSL
        W++G G L+ +  DPWIP      P L      N  VA L+  +R W   L++  F   D   IL +P+S   S D ++W P S G FTV+SAY L  SL
Subjt:  WRVGNGLLVEAATDPWIPREGPSTPILANRNAKNYTVAQLLDTNRVWREDLIRDLFLDRDAADILNIPISQHNSEDSILWDPDSKGMFTVRSAYRLGFSL

Query:  QNAADASSSGYGFKESMWKQFWNIKAPAKIKVCGWKIYNDLLPTKTNLINRGFDINSSCLFCRNHPETLKHLLWECKLSK
        +    +S+S      + WK FW+++ P K+K+  W+  +D LP  T+L+ R    +S+C  C+   E+  H L+ CK +K
Subjt:  QNAADASSSGYGFKESMWKQFWNIKAPAKIKVCGWKIYNDLLPTKTNLINRGFDINSSCLFCRNHPETLKHLLWECKLSK

A0A803QEG9 Uncharacterized protein4.8e-9344.74Show/hide
Query:  SPNTNTDLVQRVKDVLQVNYTESLGQYLGLPSQNARNKKEIFNNIKNRVWKALQGWKGRLFSAAGREILIKAVAQAIPNYAMSCFKFPVTLTNELNSMCA
        SPNT           L +  +E   +YLGLPS + R+K+E+F+NIK R+WK +Q W  +LFSA GRE+L+KAV Q+IP YAMSCF+ PV   N+L SM A
Subjt:  SPNTNTDLVQRVKDVLQVNYTESLGQYLGLPSQNARNKKEIFNNIKNRVWKALQGWKGRLFSAAGREILIKAVAQAIPNYAMSCFKFPVTLTNELNSMCA

Query:  RFWWGSGEVHRKIHWRSWKKLCIHKAQGGMGFRDLTIFNQAMLAKQSWRIVCNSNSLLTRVLRGRYFKTGHFLKAKLGSNPSYTWRSIIWGRELFKKGYR
         FWWG  E   KIHWRSW  LC  K +GGMGFR    FNQA+LAKQ+WRIV   NSLL+ +L+ +YF    FL+A +G +PS TW+ I WGREL   G R
Subjt:  RFWWGSGEVHRKIHWRSWKKLCIHKAQGGMGFRDLTIFNQAMLAKQSWRIVCNSNSLLTRVLRGRYFKTGHFLKAKLGSNPSYTWRSIIWGRELFKKGYR

Query:  WRVGNGLLVEAATDPWIPREGPSTPILANRNAKNYTVAQLLDTNRVWREDLIRDLFLDRDAADILNIPISQHNSEDSILWDPDSKGMFTVRSAYRLGFSL
        W++G G  V +  DPW+P      PI  +    N  VA L+   R W   L++  F   D   IL +P+S   + D ++W   S G FTV+SAY L  SL
Subjt:  WRVGNGLLVEAATDPWIPREGPSTPILANRNAKNYTVAQLLDTNRVWREDLIRDLFLDRDAADILNIPISQHNSEDSILWDPDSKGMFTVRSAYRLGFSL

Query:  QNAADASSSGYGFKESMWKQFWNIKAPAKIKVCGWKIYNDLLPTKTNLINRGFDINSSCLFCRNHPETLKHLLWECKLSK
        +N   +SSS    +   WK FW+++ P K+K+  W++ +D LP  T+L+ R    +S+C  C+   E+  H L+ CK +K
Subjt:  QNAADASSSGYGFKESMWKQFWNIKAPAKIKVCGWKIYNDLLPTKTNLINRGFDINSSCLFCRNHPETLKHLLWECKLSK

A0A803QH07 Uncharacterized protein8.3e-9339.41Show/hide
Query:  SPNTNTDLVQRVKDVLQVNYTESLGQYLGLPSQNARNKKEIFNNIKNRVWKALQGWKGRLFSAAGREILIKAVAQAIPNYAMSCFKFPVTLTNELNSMCA
        SPNT+          LQ+  T+   +YLGLPS + R+K+E+F+NIK +VWK L  W  ++FS  G+E+L+KAV Q+IP YAMSCFK      N+L SM A
Subjt:  SPNTNTDLVQRVKDVLQVNYTESLGQYLGLPSQNARNKKEIFNNIKNRVWKALQGWKGRLFSAAGREILIKAVAQAIPNYAMSCFKFPVTLTNELNSMCA

Query:  RFWWGSGEVHRKIHWRSWKKLCIHKAQGGMGFRDLTIFNQAMLAKQSWRIVCNSNSLLTRVLRGRYFKTGHFLKAKLGSNPSYTWRSIIWGRELFKKGYR
         FWWG+ +   KIHW+ WK LC  K +GGMGFR    FNQA+LAKQ+WRI    +SLL+R+L+ RYF T  FL A +G +PSYTW+SI WGREL  KG R
Subjt:  RFWWGSGEVHRKIHWRSWKKLCIHKAQGGMGFRDLTIFNQAMLAKQSWRIVCNSNSLLTRVLRGRYFKTGHFLKAKLGSNPSYTWRSIIWGRELFKKGYR

Query:  WRVGNGLLVEAATDPWIPREGPSTPILANRNAKNYTVAQLLDTNRVWREDLIRDLFLDRDAADILNIPISQHNSEDSILWDPDSKGMFTVRSAYRLGFSL
        ++VGNG  ++ + DPWIP      P+ +        V+ L++ NR W   L+ D F   D   IL+IP+S   ++D ++W   + G + V+S + L   L
Subjt:  WRVGNGLLVEAATDPWIPREGPSTPILANRNAKNYTVAQLLDTNRVWREDLIRDLFLDRDAADILNIPISQHNSEDSILWDPDSKGMFTVRSAYRLGFSL

Query:  QNAADASSSGYGFKESMWKQFWNIKAPAKIKVCGWKIYNDLLPTKTNLINRGFDINSSCLFCRNHPETLKHLLWECKLSKDLVQRVKDVLQVNYTESL--
        ++   +SSS        WK FWN+  P KI++  WK+   +LP    L  R    +++C  C +  E++ H L+ C  +K++ +  K ++  N  +S+  
Subjt:  QNAADASSSGYGFKESMWKQFWNIKAPAKIKVCGWKIYNDLLPTKTNLINRGFDINSSCLFCRNHPETLKHLLWECKLSKDLVQRVKDVLQVNYTESL--

Query:  GQYLG-LPSQNARNKKEIFNNIKNRVW----KALQGWKGRLFSA
        G YL  L +   +   E+F  +   +W    +   G K R+ S+
Subjt:  GQYLG-LPSQNARNKKEIFNNIKNRVW----KALQGWKGRLFSA

SwissProt top hitse value%identityAlignment
P0C2F6 Putative ribonuclease H protein At1g657501.3e-3427.25Show/hide
Query:  LPSQNARNKKEIFNNIKNRVWKALQGWKGRLFSAAGREILIKAVAQAIPNYAMSCFKFPVTLTNELNSMCARFWWGSGEVHRKIHWRSWKKLCIHKAQGG
        +P    R  K+ F  I  RV   + GW+ +  S AGR  L KAV  ++P ++MS    P ++ N L+ +   F WGS    +K H   W K+C  K +GG
Subjt:  LPSQNARNKKEIFNNIKNRVWKALQGWKGRLFSAAGREILIKAVAQAIPNYAMSCFKFPVTLTNELNSMCARFWWGSGEVHRKIHWRSWKKLCIHKAQGG

Query:  MGFRDLTIFNQAMLAKQSWRIVCNSNSLLTRVLRGRY----FKTGHFLKAKLGSNPSYTWRSIIWG-RELFKKGYRWRVGNGLLVEAATDPWIPREGPST
        +G R     N+A+++K  WR++   NSL T VL+ +Y     +   +L  K   + S TWRSI  G R++   G  W  G+G  +   TD W+       
Subjt:  MGFRDLTIFNQAMLAKQSWRIVCNSNSLLTRVLRGRY----FKTGHFLKAKLGSNPSYTWRSIIWG-RELFKKGYRWRVGNGLLVEAATDPWIPREGPST

Query:  PILANRNAKNYTVAQLLDTNRVWREDLIRDLFLDRDAADILNI-PISQHN---------------SEDSILWDPDSKGMFTVRSAYRLGFSLQNAADASS
        P+L   N +  T     D + V    + +DL++     D   I P + +N               + D + W     G F+VRSAY +  ++      + 
Subjt:  PILANRNAKNYTVAQLLDTNRVWREDLIRDLFLDRDAADILNI-PISQHN---------------SEDSILWDPDSKGMFTVRSAYRLGFSLQNAADASS

Query:  SGYGFKESMWKQFWNIKAPAKIKVCGWKIYNDLLPTKTNLINRGFDINSSCLFCRNHPETLKHLLWECKLSKDLVQRV
        +      S +   W ++ P ++K   W + N  + T+     R    ++ C  C+   E++ H+L +C     +  RV
Subjt:  SGYGFKESMWKQFWNIKAPAKIKVCGWKIYNDLLPTKTNLINRGFDINSSCLFCRNHPETLKHLLWECKLSKDLVQRV

P93295 Uncharacterized mitochondrial protein AtMg003102.6e-3548.03Show/hide
Query:  AIPNYAMSCFKFPVTLTNELNSMCARFWWGSGEVHRKIHWRSWKKLCIHKA-QGGMGFRDLTIFNQAMLAKQSWRIVCNSNSLLTRVLRGRYFKTGHFLK
        A+P YAMSCF+    L  +L S    FWW S E  RKI W +W+KLC  K   GG+GFRDL  FNQA+LAKQS+RI+   ++LL+R+LR RYF     ++
Subjt:  AIPNYAMSCFKFPVTLTNELNSMCARFWWGSGEVHRKIHWRSWKKLCIHKA-QGGMGFRDLTIFNQAMLAKQSWRIVCNSNSLLTRVLRGRYFKTGHFLK

Query:  AKLGSNPSYTWRSIIWGRELFKKGYRWRVGNGLLVEAATDPWIPREGPSTPI
          +G+ PSY WRSII GREL  +G    +G+G+  +   D WI  E P  P+
Subjt:  AKLGSNPSYTWRSIIWGRELFKKGYRWRVGNGLLVEAATDPWIPREGPSTPI

Arabidopsis top hitse value%identityAlignment
AT3G24255.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein2.9e-2123.64Show/hide
Query:  QYLGLPSQNARNKKEIFNNIKNRVWKALQGWKGRLFSAAGREILIKAVAQAIPNYAMSCFKFPVTLTNELNSMCARFWWGSGEVHRKIHWRSWKKLCIHK
        +YLGLP    +     +  +  ++   +  W  R  S AGR  LI +V  ++ N+ MS F+ P     E++S+C+ F W   E++ K    +W  +C  K
Subjt:  QYLGLPSQNARNKKEIFNNIKNRVWKALQGWKGRLFSAAGREILIKAVAQAIPNYAMSCFKFPVTLTNELNSMCARFWWGSGEVHRKIHWRSWKKLCIHK

Query:  AQGGMGFRDLTIFNQAMLAKQSWRIVCNS---NSLLTRVLRGRYFKTGHFLKAKL--GSNPSY---TWRSIIWGRELFKKGYRWRVGNGLLVEAATDPWI
         +GG+G R L   N+       W I  N+   + +  ++L+ R   +G F+K  +  GSN S+    W  I  GR +   G+R  +  G+ + A+    +
Subjt:  AQGGMGFRDLTIFNQAMLAKQSWRIVCNS---NSLLTRVLRGRYFKTGHFLKAKL--GSNPSY---TWRSIIWGRELFKKGYRWRVGNGLLVEAATDPWI

Query:  PREGPSTPILANRNAKNYTVAQLLDTNRVWREDLIRDLFLDRDAADILNIPISQHNSEDSILWDPDS---KGMFTVRSAYRLGFSLQNAADASSSGYGFK
            P       R  ++ T+ ++        ED+I         A++ +  ++  + ED++ W  +    K  F  +  +           A++     K
Subjt:  PREGPSTPILANRNAKNYTVAQLLDTNRVWREDLIRDLFLDRDAADILNIPISQHNSEDSILWDPDS---KGMFTVRSAYRLGFSLQNAADASSSGYGFK

Query:  ESMWKQFWNIKAPAKIKVCGWKIYNDLLPTKTNLINRGFDINSSCLFCRNHPETLKHLLWECKLSKDL
         + +K  W   A  K  V  W    + L T   +++     +SSC+ C +  ET  HL + C  S ++
Subjt:  ESMWKQFWNIKAPAKIKVCGWKIYNDLLPTKTNLINRGFDINSSCLFCRNHPETLKHLLWECKLSKDL

AT3G25720.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein5.8e-0626.92Show/hide
Query:  LCIHKAQGGMGFRDLTIFNQAMLAKQSWRIVCNSNSLLTRVLRGRYFK------TGHFLKAKLGSNPSYTWRSIIWGRELFKKGYRWRVGNGLLVEAATD
        +C+ KA+GG+G R  + +N  +  K  WR+     SL     R  + +         F  ++   + S+ W+ ++  R L ++  R  +GNGL     TD
Subjt:  LCIHKAQGGMGFRDLTIFNQAMLAKQSWRIVCNSNSLLTRVLRGRYFK------TGHFLKAKLGSNPSYTWRSIIWGRELFKKGYRWRVGNGLLVEAATD

Query:  PWIP
         W P
Subjt:  PWIP

AT4G29090.1 Ribonuclease H-like superfamily protein1.3e-4532.08Show/hide
Query:  AIPNYAMSCFKFPVTLTNELNSMCARFWWGSGEVHRKIHWRSWKKLCIHKAQGGMGFRDLTIFNQAMLAKQSWRIVCNSNSLLTRVLRGRYFKTGHFLKA
        A+P Y M+CF  P T+  ++ S+ A FWW + +  + +HW++W  L  +KA+GG+GF+D+  FN A+L KQ WR++    SL+ +V + RYF     L A
Subjt:  AIPNYAMSCFKFPVTLTNELNSMCARFWWGSGEVHRKIHWRSWKKLCIHKAQGGMGFRDLTIFNQAMLAKQSWRIVCNSNSLLTRVLRGRYFKTGHFLKA

Query:  KLGSNPSYTWRSIIWGRELFKKGYRWRVGNGLLVEAATDPWIPREGPSTPILANR-NAKNYT-------VAQLLD-TNRVWREDLIRDLFLDRDAADILN
         LGS PS+ W+SI   +E+ ++G R  VGNG  +      W+  +  S  +   R   + Y        V+ L+D + R WR+D+I  LF + +   I  
Subjt:  KLGSNPSYTWRSIIWGRELFKKGYRWRVGNGLLVEAATDPWIPREGPSTPILANR-NAKNYT-------VAQLLD-TNRVWREDLIRDLFLDRDAADILN

Query:  IPISQHNSEDSILWDPDSKGMFTVRSAYRLGFSLQNAADASSSGYGFKE----SMWKQFWNIKAPAKIKVCGWKIYNDLLPTKTNLINRGFDINSSCLFC
        +        DS  WD  S G +TV+S Y   + L    +  SS     E     ++++ W  +   KI+   WK  ++ LP    L  R     S+C+ C
Subjt:  IPISQHNSEDSILWDPDSKGMFTVRSAYRLGFSLQNAADASSSGYGFKE----SMWKQFWNIKAPAKIKVCGWKIYNDLLPTKTNLINRGFDINSSCLFC

Query:  RNHPETLKHLLWECKLSK
         +  ET+ HLL++C  ++
Subjt:  RNHPETLKHLLWECKLSK

ATMG00310.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein1.8e-3648.03Show/hide
Query:  AIPNYAMSCFKFPVTLTNELNSMCARFWWGSGEVHRKIHWRSWKKLCIHKA-QGGMGFRDLTIFNQAMLAKQSWRIVCNSNSLLTRVLRGRYFKTGHFLK
        A+P YAMSCF+    L  +L S    FWW S E  RKI W +W+KLC  K   GG+GFRDL  FNQA+LAKQS+RI+   ++LL+R+LR RYF     ++
Subjt:  AIPNYAMSCFKFPVTLTNELNSMCARFWWGSGEVHRKIHWRSWKKLCIHKA-QGGMGFRDLTIFNQAMLAKQSWRIVCNSNSLLTRVLRGRYFKTGHFLK

Query:  AKLGSNPSYTWRSIIWGRELFKKGYRWRVGNGLLVEAATDPWIPREGPSTPI
          +G+ PSY WRSII GREL  +G    +G+G+  +   D WI  E P  P+
Subjt:  AKLGSNPSYTWRSIIWGRELFKKGYRWRVGNGLLVEAATDPWIPREGPSTPI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACTAGTCCAAACACTAATACAGATCTAGTCCAAAGGGTCAAGGATGTTTTGCAGGTTAACTATACAGAAAGCTTAGGACAATACCTTGGGCTCCCATCGCAGAATGC
GCGCAACAAGAAGGAGATCTTCAACAATATCAAAAATAGAGTGTGGAAAGCTCTTCAGGGGTGGAAAGGGAGATTGTTTTCAGCTGCAGGGCGAGAGATCCTGATTAAAG
CAGTGGCCCAAGCAATCCCAAATTATGCTATGAGCTGCTTCAAATTCCCGGTGACTTTGACTAATGAATTAAATTCAATGTGTGCTAGGTTTTGGTGGGGCTCTGGGGAG
GTCCACAGGAAGATCCATTGGAGGAGTTGGAAGAAACTATGCATTCACAAGGCTCAAGGTGGCATGGGGTTTCGAGATTTAACTATATTCAATCAGGCAATGTTAGCGAA
GCAAAGCTGGAGGATCGTTTGCAACTCGAATAGCTTATTAACAAGGGTGCTTCGGGGTCGCTATTTTAAAACGGGTCATTTCCTCAAGGCAAAACTTGGAAGCAACCCTT
CCTACACTTGGCGAAGCATCATTTGGGGGAGAGAATTGTTTAAGAAGGGCTATAGATGGCGTGTTGGCAATGGTCTCCTTGTGGAAGCGGCTACAGATCCATGGATTCCT
AGGGAAGGTCCAAGTACGCCCATTCTTGCTAACAGGAATGCTAAAAACTATACAGTGGCTCAATTGCTTGATACTAATCGGGTCTGGAGAGAGGATTTGATTCGAGATCT
GTTTTTGGATAGAGATGCAGCTGATATTCTTAATATTCCCATCAGTCAACACAATAGTGAAGATTCGATATTATGGGATCCTGATTCTAAAGGAATGTTCACAGTTAGAA
GTGCCTATCGTTTGGGTTTTAGCCTCCAAAATGCAGCTGATGCTTCAAGCTCAGGATATGGTTTTAAGGAATCCATGTGGAAACAATTTTGGAACATAAAAGCCCCAGCA
AAGATCAAAGTTTGTGGGTGGAAGATTTATAATGATCTCCTCCCAACAAAAACAAATTTGATTAACAGGGGTTTTGATATTAATTCTTCATGTTTATTTTGTAGGAACCA
TCCGGAGACTTTGAAGCATTTGCTTTGGGAATGCAAGTTATCCAAAGATCTAGTCCAAAGGGTCAAGGATGTTTTGCAGGTTAACTATACAGAAAGCTTAGGACAATACC
TTGGGCTCCCATCGCAGAATGCGCGCAACAAGAAGGAGATCTTCAACAATATCAAAAATAGAGTGTGGAAAGCTCTTCAGGGGTGGAAAGGGAGATTGTTTTCAGCTGCA
GGGCGAGAGATCCTGATTAAAGCAGTGGCCCAAGCAATCCCAAATTATGCTATGAGCTGCTTCAAATTCCCGGTGACTTTGACTAATGAATTAAATTCAATGTGTGCTAG
GTTTTGGTGGGGCTCTGGGAGGTCCACAGGAAGATCCATTGGAGGAGTTGGAAGAAACTATGCATTCACAAGGCTCAAGGTGGCATGGGGTTTCGAGATTTACTATATTC
AATCAGGCAATGCAAAACTTGGAAGCAACCCTTCCTACACTTGGCGAAGCATCATTTGGGGGAGAGAATTGTTTAAGAAGGGCTATAGATGGCGTGTTGGCAATGGTCTC
CTTGTGGAAGCGGCTACAGATCCATGGATTCCTAGGGAAGGTCCAAGTACGCCCATTCTTGCTAACAGGAATGCTAAAAACTATACAGTGGCTCAATTGCTTGATACTAA
TCGGGTCTGGAGAGAGGATTTGATTCGAGATCTGTTTTTGGATAGAGATGCAGCTGATATTCTTAATATTCCATCAGTCAACACATAG
mRNA sequenceShow/hide mRNA sequence
ATGACTAGTCCAAACACTAATACAGATCTAGTCCAAAGGGTCAAGGATGTTTTGCAGGTTAACTATACAGAAAGCTTAGGACAATACCTTGGGCTCCCATCGCAGAATGC
GCGCAACAAGAAGGAGATCTTCAACAATATCAAAAATAGAGTGTGGAAAGCTCTTCAGGGGTGGAAAGGGAGATTGTTTTCAGCTGCAGGGCGAGAGATCCTGATTAAAG
CAGTGGCCCAAGCAATCCCAAATTATGCTATGAGCTGCTTCAAATTCCCGGTGACTTTGACTAATGAATTAAATTCAATGTGTGCTAGGTTTTGGTGGGGCTCTGGGGAG
GTCCACAGGAAGATCCATTGGAGGAGTTGGAAGAAACTATGCATTCACAAGGCTCAAGGTGGCATGGGGTTTCGAGATTTAACTATATTCAATCAGGCAATGTTAGCGAA
GCAAAGCTGGAGGATCGTTTGCAACTCGAATAGCTTATTAACAAGGGTGCTTCGGGGTCGCTATTTTAAAACGGGTCATTTCCTCAAGGCAAAACTTGGAAGCAACCCTT
CCTACACTTGGCGAAGCATCATTTGGGGGAGAGAATTGTTTAAGAAGGGCTATAGATGGCGTGTTGGCAATGGTCTCCTTGTGGAAGCGGCTACAGATCCATGGATTCCT
AGGGAAGGTCCAAGTACGCCCATTCTTGCTAACAGGAATGCTAAAAACTATACAGTGGCTCAATTGCTTGATACTAATCGGGTCTGGAGAGAGGATTTGATTCGAGATCT
GTTTTTGGATAGAGATGCAGCTGATATTCTTAATATTCCCATCAGTCAACACAATAGTGAAGATTCGATATTATGGGATCCTGATTCTAAAGGAATGTTCACAGTTAGAA
GTGCCTATCGTTTGGGTTTTAGCCTCCAAAATGCAGCTGATGCTTCAAGCTCAGGATATGGTTTTAAGGAATCCATGTGGAAACAATTTTGGAACATAAAAGCCCCAGCA
AAGATCAAAGTTTGTGGGTGGAAGATTTATAATGATCTCCTCCCAACAAAAACAAATTTGATTAACAGGGGTTTTGATATTAATTCTTCATGTTTATTTTGTAGGAACCA
TCCGGAGACTTTGAAGCATTTGCTTTGGGAATGCAAGTTATCCAAAGATCTAGTCCAAAGGGTCAAGGATGTTTTGCAGGTTAACTATACAGAAAGCTTAGGACAATACC
TTGGGCTCCCATCGCAGAATGCGCGCAACAAGAAGGAGATCTTCAACAATATCAAAAATAGAGTGTGGAAAGCTCTTCAGGGGTGGAAAGGGAGATTGTTTTCAGCTGCA
GGGCGAGAGATCCTGATTAAAGCAGTGGCCCAAGCAATCCCAAATTATGCTATGAGCTGCTTCAAATTCCCGGTGACTTTGACTAATGAATTAAATTCAATGTGTGCTAG
GTTTTGGTGGGGCTCTGGGAGGTCCACAGGAAGATCCATTGGAGGAGTTGGAAGAAACTATGCATTCACAAGGCTCAAGGTGGCATGGGGTTTCGAGATTTACTATATTC
AATCAGGCAATGCAAAACTTGGAAGCAACCCTTCCTACACTTGGCGAAGCATCATTTGGGGGAGAGAATTGTTTAAGAAGGGCTATAGATGGCGTGTTGGCAATGGTCTC
CTTGTGGAAGCGGCTACAGATCCATGGATTCCTAGGGAAGGTCCAAGTACGCCCATTCTTGCTAACAGGAATGCTAAAAACTATACAGTGGCTCAATTGCTTGATACTAA
TCGGGTCTGGAGAGAGGATTTGATTCGAGATCTGTTTTTGGATAGAGATGCAGCTGATATTCTTAATATTCCATCAGTCAACACATAG
Protein sequenceShow/hide protein sequence
MTSPNTNTDLVQRVKDVLQVNYTESLGQYLGLPSQNARNKKEIFNNIKNRVWKALQGWKGRLFSAAGREILIKAVAQAIPNYAMSCFKFPVTLTNELNSMCARFWWGSGE
VHRKIHWRSWKKLCIHKAQGGMGFRDLTIFNQAMLAKQSWRIVCNSNSLLTRVLRGRYFKTGHFLKAKLGSNPSYTWRSIIWGRELFKKGYRWRVGNGLLVEAATDPWIP
REGPSTPILANRNAKNYTVAQLLDTNRVWREDLIRDLFLDRDAADILNIPISQHNSEDSILWDPDSKGMFTVRSAYRLGFSLQNAADASSSGYGFKESMWKQFWNIKAPA
KIKVCGWKIYNDLLPTKTNLINRGFDINSSCLFCRNHPETLKHLLWECKLSKDLVQRVKDVLQVNYTESLGQYLGLPSQNARNKKEIFNNIKNRVWKALQGWKGRLFSAA
GREILIKAVAQAIPNYAMSCFKFPVTLTNELNSMCARFWWGSGRSTGRSIGGVGRNYAFTRLKVAWGFEIYYIQSGNAKLGSNPSYTWRSIIWGRELFKKGYRWRVGNGL
LVEAATDPWIPREGPSTPILANRNAKNYTVAQLLDTNRVWREDLIRDLFLDRDAADILNIPSVNT