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Lag0032643 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0032643
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Descriptionglycine-rich cell wall structural protein 1-like
Genome locationchr11:35579165..35579533
RNA-Seq ExpressionLag0032643
SyntenyLag0032643
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0042689.1 uncharacterized protein E6C27_scaffold44G001870 [Cucumis melo var. makuwa]9.1e-0651.19Show/hide
Query:  MASMQCSKPGEKS---QQQKHDQHQQDHCF-GHMSDKIKGVF-RGHHHAQP-PAP-----NANCGQCK--PGPKKSEHHKNKEG
        MA  QC+KP + +    QQKHDQ    HCF GH+SDKIKGVF +GHHH Q  PA      +AN   CK     KK EH   KEG
Subjt:  MASMQCSKPGEKS---QQQKHDQHQQDHCF-GHMSDKIKGVF-RGHHHAQP-PAP-----NANCGQCK--PGPKKSEHHKNKEG

XP_008437383.1 PREDICTED: uncharacterized protein LOC103482815 [Cucumis melo]5.2e-1755.17Show/hide
Query:  MASMQCSKPGEKS---QQQKHDQHQQDHCF-GHMSDKIKGVF-RGHHHAQP-PAP-----NANCGQCK--PGPKKSEHHKNKEGGFLNKIKDAFSDH-SD
        MA  QC+KP + +    QQKHDQ    HCF GH+SDKIKGVF +GHHH Q  PA      +AN   CK     KK EH   KEGG L+KIK+AFSDH SD
Subjt:  MASMQCSKPGEKS---QQQKHDQHQQDHCF-GHMSDKIKGVF-RGHHHAQP-PAP-----NANCGQCK--PGPKKSEHHKNKEGGFLNKIKDAFSDH-SD

Query:  SSDSDDDGHKAHHKRK
        SSDS+++ HK HH +K
Subjt:  SSDSDDDGHKAHHKRK

XP_022146004.1 uncharacterized protein LOC111015315 [Momordica charantia]4.5e-2161.4Show/hide
Query:  MASMQCSKPGEK--SQQQKHDQHQQDHCFGHMSDKIKGVFRGH-HHAQPP--AP------NANCGQCKPGPKKSEHHKNKEGGFLNKIKDAFSDH-SDSS
        MAS+QCSKP ++  SQ QKHD   Q HCFGH+SDKIKGVF+GH HH Q P  AP      NAN        K+ E HKNK+G  L+KIKDAFSDH SDSS
Subjt:  MASMQCSKPGEK--SQQQKHDQHQQDHCFGHMSDKIKGVFRGH-HHAQPP--AP------NANCGQCKPGPKKSEHHKNKEGGFLNKIKDAFSDH-SDSS

Query:  DSDDDGHKAHHKRK
        DSD++GHKAH K K
Subjt:  DSDDDGHKAHHKRK

XP_022958513.1 glycine-rich cell wall structural protein 1-like [Cucurbita moschata]8.0e-1067.24Show/hide
Query:  HAQPPAPNANCGQCKP-GPKKSEHHKNKEGGFLNKIKDAFSDHSDSSDSDDDGHKAHH
        H QP +PN   G CK  G +K  HHKNKEGGFLNKIKDAFSDHSD+SDSDDD  +  H
Subjt:  HAQPPAPNANCGQCKP-GPKKSEHHKNKEGGFLNKIKDAFSDHSDSSDSDDDGHKAHH

XP_038875375.1 uncharacterized protein LOC120067846 [Benincasa hispida]2.8e-2363.39Show/hide
Query:  MASMQCSKPGEKSQQQKHDQHQQDHCF-GHMSDKIKGVFRGHHHAQPP---AP---NANCGQCKP--GPKKSEHHKNKEGGFLNKIKDAFSDH-SDSSDS
        MAS+QC+KP +   QQKHDQ Q  HCF GH+SDKIKGVF+GHHH Q P   AP   +AN   CKP    KK EHHKNKEGG L+KIKDAFSDH SDSSDS
Subjt:  MASMQCSKPGEKSQQQKHDQHQQDHCF-GHMSDKIKGVFRGHHHAQPP---AP---NANCGQCKP--GPKKSEHHKNKEGGFLNKIKDAFSDH-SDSSDS

Query:  DDDGHKAHHKRK
        +++  K HH +K
Subjt:  DDDGHKAHHKRK

TrEMBL top hitse value%identityAlignment
A0A1S3AUH3 uncharacterized protein LOC1034828152.5e-1755.17Show/hide
Query:  MASMQCSKPGEKS---QQQKHDQHQQDHCF-GHMSDKIKGVF-RGHHHAQP-PAP-----NANCGQCK--PGPKKSEHHKNKEGGFLNKIKDAFSDH-SD
        MA  QC+KP + +    QQKHDQ    HCF GH+SDKIKGVF +GHHH Q  PA      +AN   CK     KK EH   KEGG L+KIK+AFSDH SD
Subjt:  MASMQCSKPGEKS---QQQKHDQHQQDHCF-GHMSDKIKGVF-RGHHHAQP-PAP-----NANCGQCK--PGPKKSEHHKNKEGGFLNKIKDAFSDH-SD

Query:  SSDSDDDGHKAHHKRK
        SSDS+++ HK HH +K
Subjt:  SSDSDDDGHKAHHKRK

A0A5A7TMV4 Uncharacterized protein4.4e-0651.19Show/hide
Query:  MASMQCSKPGEKS---QQQKHDQHQQDHCF-GHMSDKIKGVF-RGHHHAQP-PAP-----NANCGQCK--PGPKKSEHHKNKEG
        MA  QC+KP + +    QQKHDQ    HCF GH+SDKIKGVF +GHHH Q  PA      +AN   CK     KK EH   KEG
Subjt:  MASMQCSKPGEKS---QQQKHDQHQQDHCF-GHMSDKIKGVF-RGHHHAQP-PAP-----NANCGQCK--PGPKKSEHHKNKEG

A0A6J1CWW2 uncharacterized protein LOC1110153152.2e-2161.4Show/hide
Query:  MASMQCSKPGEK--SQQQKHDQHQQDHCFGHMSDKIKGVFRGH-HHAQPP--AP------NANCGQCKPGPKKSEHHKNKEGGFLNKIKDAFSDH-SDSS
        MAS+QCSKP ++  SQ QKHD   Q HCFGH+SDKIKGVF+GH HH Q P  AP      NAN        K+ E HKNK+G  L+KIKDAFSDH SDSS
Subjt:  MASMQCSKPGEK--SQQQKHDQHQQDHCFGHMSDKIKGVFRGH-HHAQPP--AP------NANCGQCKPGPKKSEHHKNKEGGFLNKIKDAFSDH-SDSS

Query:  DSDDDGHKAHHKRK
        DSD++GHKAH K K
Subjt:  DSDDDGHKAHHKRK

A0A6J1H399 glycine-rich cell wall structural protein 1-like3.9e-1067.24Show/hide
Query:  HAQPPAPNANCGQCKP-GPKKSEHHKNKEGGFLNKIKDAFSDHSDSSDSDDDGHKAHH
        H QP +PN   G CK  G +K  HHKNKEGGFLNKIKDAFSDHSD+SDSDDD  +  H
Subjt:  HAQPPAPNANCGQCKP-GPKKSEHHKNKEGGFLNKIKDAFSDHSDSSDSDDDGHKAHH

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGTCTATGCAATGCAGCAAACCAGGTGAAAAGAGCCAGCAACAGAAGCACGACCAACACCAACAGGACCATTGCTTTGGCCACATGTCCGACAAGATCAAAGGCGT
CTTCAGAGGCCACCATCATGCCCAGCCTCCTGCGCCCAATGCCAACTGCGGTCAGTGCAAGCCAGGCCCTAAGAAGAGCGAACACCACAAGAATAAAGAAGGGGGTTTCT
TGAACAAGATCAAGGATGCCTTCTCCGACCACAGCGACAGCAGCGACAGCGACGATGACGGTCACAAAGCCCACCACAAAAGGAAGGCAAGTGTTTTGTTTTTCTTCCTC
TCTCAAGATTTGTTCAAACATTTCTCATATGGTTTTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCGTCTATGCAATGCAGCAAACCAGGTGAAAAGAGCCAGCAACAGAAGCACGACCAACACCAACAGGACCATTGCTTTGGCCACATGTCCGACAAGATCAAAGGCGT
CTTCAGAGGCCACCATCATGCCCAGCCTCCTGCGCCCAATGCCAACTGCGGTCAGTGCAAGCCAGGCCCTAAGAAGAGCGAACACCACAAGAATAAAGAAGGGGGTTTCT
TGAACAAGATCAAGGATGCCTTCTCCGACCACAGCGACAGCAGCGACAGCGACGATGACGGTCACAAAGCCCACCACAAAAGGAAGGCAAGTGTTTTGTTTTTCTTCCTC
TCTCAAGATTTGTTCAAACATTTCTCATATGGTTTTTAG
Protein sequenceShow/hide protein sequence
MASMQCSKPGEKSQQQKHDQHQQDHCFGHMSDKIKGVFRGHHHAQPPAPNANCGQCKPGPKKSEHHKNKEGGFLNKIKDAFSDHSDSSDSDDDGHKAHHKRKASVLFFFL
SQDLFKHFSYGF