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Lag0032658 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0032658
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Descriptionarabinogalactan peptide 22-like
Genome locationchr11:35750794..35751129
RNA-Seq ExpressionLag0032658
SyntenyLag0032658
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR009424 - Arabinogalactan protein 16/20/22/41


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6579545.1 Arabinogalactan protein 16, partial [Cucurbita argyrosperma subsp. sororia]3.5e-1678.67Show/hide
Query:  MAVVAREVPFRVLFYVAFVLAMLLPSYAADPLSPAAQSPAASDGTSIDQGIAYVLMLLALVLTYIIHSADLSISF
        MAVVA ++PF V   V FVLAMLLP+  A  L+P AQ PAASDGTSIDQGIAYVLMLLALVLTYIIHSADLSISF
Subjt:  MAVVAREVPFRVLFYVAFVLAMLLPSYAADPLSPAAQSPAASDGTSIDQGIAYVLMLLALVLTYIIHSADLSISF

KAG7017004.1 Arabinogalactan peptide 16 [Cucurbita argyrosperma subsp. argyrosperma]1.2e-1678.67Show/hide
Query:  MAVVAREVPFRVLFYVAFVLAMLLPSYAADPLSPAAQSPAASDGTSIDQGIAYVLMLLALVLTYIIHSADLSISF
        MAVVA ++PF V F V FVLAM+LP+  A  L+P AQ PAASDGTSIDQGIAYVLMLLALVLTYIIHSADLSISF
Subjt:  MAVVAREVPFRVLFYVAFVLAMLLPSYAADPLSPAAQSPAASDGTSIDQGIAYVLMLLALVLTYIIHSADLSISF

KAG7036000.1 Arabinogalactan peptide 20 [Cucurbita argyrosperma subsp. argyrosperma]6.2e-1369.33Show/hide
Query:  MAVVA-REVPFRVLFYVAFVLAMLLPSYAADPLSPAAQSPAASDGTSIDQGIAYVLMLLALVLTYIIHSADLSIS
        M VVA  +VP+ VL  VAF LAML P+ AADP    AQ P ASDGTS+DQGIAYVLMLLAL+LTYIIH A+L IS
Subjt:  MAVVA-REVPFRVLFYVAFVLAMLLPSYAADPLSPAAQSPAASDGTSIDQGIAYVLMLLALVLTYIIHSADLSIS

XP_022996281.1 arabinogalactan peptide 22-like [Cucurbita maxima]3.6e-1370.67Show/hide
Query:  MAVVAR-EVPFRVLFYVAFVLAMLLPSYAADPLSPAAQSPAASDGTSIDQGIAYVLMLLALVLTYIIHSADLSIS
        M VVA  +VP+ VL  VAFVLAML P+ AADP    AQ P ASDGTS+DQGIAYVLMLLAL+LTYIIH A+L IS
Subjt:  MAVVAR-EVPFRVLFYVAFVLAMLLPSYAADPLSPAAQSPAASDGTSIDQGIAYVLMLLALVLTYIIHSADLSIS

XP_023532560.1 arabinogalactan peptide 20-like [Cucurbita pepo subsp. pepo]2.1e-1370.67Show/hide
Query:  MAVVA-REVPFRVLFYVAFVLAMLLPSYAADPLSPAAQSPAASDGTSIDQGIAYVLMLLALVLTYIIHSADLSIS
        M VVA  +VP+ VL  VAFVLAML P+ AADP    AQ P ASDGTS+DQGIAYVLMLLAL+LTYIIH A+L IS
Subjt:  MAVVA-REVPFRVLFYVAFVLAMLLPSYAADPLSPAAQSPAASDGTSIDQGIAYVLMLLALVLTYIIHSADLSIS

TrEMBL top hitse value%identityAlignment
A0A0A0KK44 Uncharacterized protein5.7e-1272Show/hide
Query:  MAVVAREVPF-RVLFYVAFVLAMLLPSYAADPLSPAAQSPAASDGTSIDQGIAYVLMLLALVLTYIIHSADLSIS
        MAVVA +VPF  +LF VA VL  L  +Y A  LSP AQ PA  DGTSIDQGIAYVLMLLALVLTYIIHSADL +S
Subjt:  MAVVAREVPF-RVLFYVAFVLAMLLPSYAADPLSPAAQSPAASDGTSIDQGIAYVLMLLALVLTYIIHSADLSIS

A0A1S3ATI9 arabinogalactan peptide 22-like2.2e-1169.33Show/hide
Query:  MAVVAREVPFR-VLFYVAFVLAMLLPSYAADPLSPAAQSPAASDGTSIDQGIAYVLMLLALVLTYIIHSADLSIS
        MAVVA ++PF  +LF VA VL  L P+  A  LSP AQ PA SDGTSIDQGIAY LMLLALVLTYIIHSAD  +S
Subjt:  MAVVAREVPFR-VLFYVAFVLAMLLPSYAADPLSPAAQSPAASDGTSIDQGIAYVLMLLALVLTYIIHSADLSIS

A0A5D3C2F1 Arabinogalactan peptide 22-like2.2e-1169.33Show/hide
Query:  MAVVAREVPFR-VLFYVAFVLAMLLPSYAADPLSPAAQSPAASDGTSIDQGIAYVLMLLALVLTYIIHSADLSIS
        MAVVA ++PF  +LF VA VL  L P+  A  LSP AQ PA SDGTSIDQGIAY LMLLALVLTYIIHSAD  +S
Subjt:  MAVVAREVPFR-VLFYVAFVLAMLLPSYAADPLSPAAQSPAASDGTSIDQGIAYVLMLLALVLTYIIHSADLSIS

A0A6J1CXM0 arabinogalactan peptide 22-like4.5e-0973.02Show/hide
Query:  VAFVLAMLLPSYA---ADPLSPAAQSPAASDGTSIDQGIAYVLMLLALVLTYIIHSADLSISF
        VAFVL   LP  A    + +SP AQ  A SDGTSIDQGIAY LMLLALVLTYIIHSADLSISF
Subjt:  VAFVLAMLLPSYA---ADPLSPAAQSPAASDGTSIDQGIAYVLMLLALVLTYIIHSADLSISF

A0A6J1K4A3 arabinogalactan peptide 22-like1.8e-1370.67Show/hide
Query:  MAVVAR-EVPFRVLFYVAFVLAMLLPSYAADPLSPAAQSPAASDGTSIDQGIAYVLMLLALVLTYIIHSADLSIS
        M VVA  +VP+ VL  VAFVLAML P+ AADP    AQ P ASDGTS+DQGIAYVLMLLAL+LTYIIH A+L IS
Subjt:  MAVVAR-EVPFRVLFYVAFVLAMLLPSYAADPLSPAAQSPAASDGTSIDQGIAYVLMLLALVLTYIIHSADLSIS

SwissProt top hitse value%identityAlignment
O82337 Arabinogalactan protein 163.1e-0758.33Show/hide
Query:  AFVLAMLLPSYAADPLSPAAQSPA-ASDGTSIDQGIAYVLMLLALVLTYIIHSADLSISF
        +FV A++L    A  L+PA   PA  SDGTSIDQGIAY+LM++ALVLTY+IH  D S S+
Subjt:  AFVLAMLLPSYAADPLSPAAQSPA-ASDGTSIDQGIAYVLMLLALVLTYIIHSADLSISF

Q8L9T8 Arabinogalactan protein 412.0e-0659.32Show/hide
Query:  FRVLFYVAFVLAMLLPSYAADPLSPAAQSPA-ASDGTSIDQGIAYVLMLLALVLTYIIH
        F V   V+ + A+LLP   A   +PA   PA  SDGT+IDQGIAYVLML+ALVLTY+IH
Subjt:  FRVLFYVAFVLAMLLPSYAADPLSPAAQSPA-ASDGTSIDQGIAYVLMLLALVLTYIIH

Q9FK16 Arabinogalactan protein 223.8e-0553.33Show/hide
Query:  PFRVLFYVAFVLAMLLPSYAADPLSPAAQSPA-ASDGTSIDQGIAYVLMLLALVLTYIIH
        P  +L     +  +LLP   +   SPA   PA  SDGTSIDQGIAYVLM++AL LTY IH
Subjt:  PFRVLFYVAFVLAMLLPSYAADPLSPAAQSPA-ASDGTSIDQGIAYVLMLLALVLTYIIH

Q9M373 Arabinogalactan protein 201.4e-0758.73Show/hide
Query:  VLFYVAFVLAMLLPSYAADPLSPAAQSPAASDGTSIDQGIAYVLMLLALVLTYIIHSADLSIS
        V+   AFV A++ P   A  L+P A SP  SDGTSIDQGIAY+LM++ALVLTY+IH  D S S
Subjt:  VLFYVAFVLAMLLPSYAADPLSPAAQSPAASDGTSIDQGIAYVLMLLALVLTYIIHSADLSIS

Arabidopsis top hitse value%identityAlignment
AT2G46330.1 arabinogalactan protein 162.2e-0858.33Show/hide
Query:  AFVLAMLLPSYAADPLSPAAQSPA-ASDGTSIDQGIAYVLMLLALVLTYIIHSADLSISF
        +FV A++L    A  L+PA   PA  SDGTSIDQGIAY+LM++ALVLTY+IH  D S S+
Subjt:  AFVLAMLLPSYAADPLSPAAQSPA-ASDGTSIDQGIAYVLMLLALVLTYIIHSADLSISF

AT3G61640.1 arabinogalactan protein 209.9e-0958.73Show/hide
Query:  VLFYVAFVLAMLLPSYAADPLSPAAQSPAASDGTSIDQGIAYVLMLLALVLTYIIHSADLSIS
        V+   AFV A++ P   A  L+P A SP  SDGTSIDQGIAY+LM++ALVLTY+IH  D S S
Subjt:  VLFYVAFVLAMLLPSYAADPLSPAAQSPAASDGTSIDQGIAYVLMLLALVLTYIIHSADLSIS

AT5G24105.1 arabinogalactan protein 411.4e-0759.32Show/hide
Query:  FRVLFYVAFVLAMLLPSYAADPLSPAAQSPA-ASDGTSIDQGIAYVLMLLALVLTYIIH
        F V   V+ + A+LLP   A   +PA   PA  SDGT+IDQGIAYVLML+ALVLTY+IH
Subjt:  FRVLFYVAFVLAMLLPSYAADPLSPAAQSPA-ASDGTSIDQGIAYVLMLLALVLTYIIH

AT5G53250.1 arabinogalactan protein 222.7e-0653.33Show/hide
Query:  PFRVLFYVAFVLAMLLPSYAADPLSPAAQSPA-ASDGTSIDQGIAYVLMLLALVLTYIIH
        P  +L     +  +LLP   +   SPA   PA  SDGTSIDQGIAYVLM++AL LTY IH
Subjt:  PFRVLFYVAFVLAMLLPSYAADPLSPAAQSPA-ASDGTSIDQGIAYVLMLLALVLTYIIH


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGTCGTTGCTCGTGAAGTCCCTTTCCGTGTTCTATTTTACGTTGCTTTTGTTTTGGCTATGCTTTTGCCTTCTTATGCTGCTGATCCTTTGTCTCCGGCGGCCCA
ATCTCCTGCTGCTAGCGATGGGACAAGCATAGACCAAGGGATTGCTTATGTGTTGATGTTGTTAGCGCTGGTGCTCACTTACATTATCCATTCAGCTGATCTTTCTATCA
GTTTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCGGTCGTTGCTCGTGAAGTCCCTTTCCGTGTTCTATTTTACGTTGCTTTTGTTTTGGCTATGCTTTTGCCTTCTTATGCTGCTGATCCTTTGTCTCCGGCGGCCCA
ATCTCCTGCTGCTAGCGATGGGACAAGCATAGACCAAGGGATTGCTTATGTGTTGATGTTGTTAGCGCTGGTGCTCACTTACATTATCCATTCAGCTGATCTTTCTATCA
GTTTTTAA
Protein sequenceShow/hide protein sequence
MAVVAREVPFRVLFYVAFVLAMLLPSYAADPLSPAAQSPAASDGTSIDQGIAYVLMLLALVLTYIIHSADLSISF