; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0032736 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0032736
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionYqgFc domain-containing protein
Genome locationchr11:36896240..36898072
RNA-Seq ExpressionLag0032736
SyntenyLag0032736
Gene Ontology termsGO:0000967 - rRNA 5'-end processing (biological process)
InterPro domainsIPR005227 - Putative pre-16S rRNA nuclease
IPR006641 - YqgF/RNase H-like domain
IPR012337 - Ribonuclease H-like superfamily
IPR037027 - YqgF/RNase H-like domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7036046.1 hypothetical protein SDJN02_02846 [Cucurbita argyrosperma subsp. argyrosperma]1.5e-7879.38Show/hide
Query:  MKYVKPLNLFHDLLKRNALERGRFLGLDVGDKYVGLAVSDPDNKIASPLSVLLRKKTNMHLVAQDFQRLISELSLAGFIVGYPFDGKRPNAD--------
        MKYV+PLNLF DLLK NALERGRFLGLDVGDKYVGLAVSDPDNKIASPLSVL RKKTNMHL+A DFQRLISELSL+GFIVGYPFDG+R N D        
Subjt:  MKYVKPLNLFHDLLKRNALERGRFLGLDVGDKYVGLAVSDPDNKIASPLSVLLRKKTNMHLVAQDFQRLISELSLAGFIVGYPFDGKRPNAD--------

Query:  -----------------AVQVKIFIDDLCKTGKLEGVKYTFWNECFTSKNVELLIKPLKLPPILSKTIIDKFAAVGILQGYLDYFNRKSDLEER
                         AVQVKIFIDDLCKTGKLEGVKYTFW+ECFTSKNVELLIKPLKLPPILSKTIIDKFAAVGILQGYLD+FNR+ +LEER
Subjt:  -----------------AVQVKIFIDDLCKTGKLEGVKYTFWNECFTSKNVELLIKPLKLPPILSKTIIDKFAAVGILQGYLDYFNRKSDLEER

XP_022159849.1 uncharacterized protein LOC111026145 [Momordica charantia]1.6e-7787.35Show/hide
Query:  MKYVKPLNLFHDLLKRNALERGRFLGLDVGDKYVGLAVSDPDNKIASPLSVLLRKKTNMHLVAQDFQRLISELSLAGFIVGYPFDGKRPNADAVQVKIFI
        MKYVKPLN+F DLL RN LERGRFLGLDVGDKYVGLAVSDPDN IASPLSVLLRKKT MHL+A+D QRLISELSLAGFIVGYPFD +R NADAVQVKIFI
Subjt:  MKYVKPLNLFHDLLKRNALERGRFLGLDVGDKYVGLAVSDPDNKIASPLSVLLRKKTNMHLVAQDFQRLISELSLAGFIVGYPFDGKRPNADAVQVKIFI

Query:  DDLCKTGKLEGVKYTFWNECFTSKNVELLIKPLKLPPILSKTIIDKFAAVGILQGYLDYFNRKSDL
        DDLCKTG LEGVKYTFW+ECFTSKNVELLIKPL+LPP+LSKTI+DKFAAVGILQGYLDY NR+ +L
Subjt:  DDLCKTGKLEGVKYTFWNECFTSKNVELLIKPLKLPPILSKTIIDKFAAVGILQGYLDYFNRKSDL

XP_022957830.1 uncharacterized protein LOC111459253 [Cucurbita moschata]7.5e-8391.12Show/hide
Query:  MKYVKPLNLFHDLLKRNALERGRFLGLDVGDKYVGLAVSDPDNKIASPLSVLLRKKTNMHLVAQDFQRLISELSLAGFIVGYPFDGKRPNADAVQVKIFI
        MKYV+PLNLF DLLK NALERGRFLGLDVGDKYVGLAVSDPDNKIASPLSVL RKKTNMHL+A DFQRLISELSL+GFIVGYPFDG+R NADAVQVKIFI
Subjt:  MKYVKPLNLFHDLLKRNALERGRFLGLDVGDKYVGLAVSDPDNKIASPLSVLLRKKTNMHLVAQDFQRLISELSLAGFIVGYPFDGKRPNADAVQVKIFI

Query:  DDLCKTGKLEGVKYTFWNECFTSKNVELLIKPLKLPPILSKTIIDKFAAVGILQGYLDYFNRKSDLEER
        DDLCKTGKLEGVKYTFW+ECFTSKNVELLIKPLKLPPILSKTIIDKFAAVGILQGYLD+FNR+ +L+ER
Subjt:  DDLCKTGKLEGVKYTFWNECFTSKNVELLIKPLKLPPILSKTIIDKFAAVGILQGYLDYFNRKSDLEER

XP_022995255.1 uncharacterized protein LOC111490857 [Cucurbita maxima]3.4e-8391.72Show/hide
Query:  MKYVKPLNLFHDLLKRNALERGRFLGLDVGDKYVGLAVSDPDNKIASPLSVLLRKKTNMHLVAQDFQRLISELSLAGFIVGYPFDGKRPNADAVQVKIFI
        MKYV+PLNLF DLLK NALERGRFLGLDVGDKYVGLAVSDPDNKIASPLSVL RKKTNMHL+A DFQRLISELSL+GFIVGYPFDG+R NADAVQVKIFI
Subjt:  MKYVKPLNLFHDLLKRNALERGRFLGLDVGDKYVGLAVSDPDNKIASPLSVLLRKKTNMHLVAQDFQRLISELSLAGFIVGYPFDGKRPNADAVQVKIFI

Query:  DDLCKTGKLEGVKYTFWNECFTSKNVELLIKPLKLPPILSKTIIDKFAAVGILQGYLDYFNRKSDLEER
        DDLCKTGKLEGVKYTFW+ECFTSKNVELLIKPLKLPPILSKTIIDKFAAVGILQGYLD+FNR+ +LEER
Subjt:  DDLCKTGKLEGVKYTFWNECFTSKNVELLIKPLKLPPILSKTIIDKFAAVGILQGYLDYFNRKSDLEER

XP_023533829.1 uncharacterized protein LOC111795559 [Cucurbita pepo subsp. pepo]1.7e-8291.12Show/hide
Query:  MKYVKPLNLFHDLLKRNALERGRFLGLDVGDKYVGLAVSDPDNKIASPLSVLLRKKTNMHLVAQDFQRLISELSLAGFIVGYPFDGKRPNADAVQVKIFI
        MKYV+PLNLF DLLK NALERGRFLGLDVGDKYVGLAVSDPDNKIASPLSVL RKKTNMHL+A DFQRLISELSL+GFIVGYPFDG+R NADAVQVKIFI
Subjt:  MKYVKPLNLFHDLLKRNALERGRFLGLDVGDKYVGLAVSDPDNKIASPLSVLLRKKTNMHLVAQDFQRLISELSLAGFIVGYPFDGKRPNADAVQVKIFI

Query:  DDLCKTGKLEGVKYTFWNECFTSKNVELLIKPLKLPPILSKTIIDKFAAVGILQGYLDYFNRKSDLEER
        DDLCKTGKLEGVKYTFW+ECFTSKNVELLIKPLKLPPILSKTIIDKFAAVGILQ YLD+FNR+ +LEER
Subjt:  DDLCKTGKLEGVKYTFWNECFTSKNVELLIKPLKLPPILSKTIIDKFAAVGILQGYLDYFNRKSDLEER

TrEMBL top hitse value%identityAlignment
A0A0A0KMK7 YqgFc domain-containing protein1.5e-7383.33Show/hide
Query:  MKYVKPLNLFHDLLKRNALERGRFLGLDVGDKYVGLAVSDPDNKIASPLSVLLRKKTNMHLVAQDFQRLISELSLAGFIVGYPFDGKRPNADAVQVKIFI
        MKYV+PL LF DL KR+ALE GR LGLDVGDKYVGLAVSDPDNKIA PLSVLLRKKT M L+AQDFQ++ISE SLAGFIVGYPFD  R N DA+QVKIFI
Subjt:  MKYVKPLNLFHDLLKRNALERGRFLGLDVGDKYVGLAVSDPDNKIASPLSVLLRKKTNMHLVAQDFQRLISELSLAGFIVGYPFDGKRPNADAVQVKIFI

Query:  DDLCKTGKLEGVKYTFWNECFTSKNVELLIKPLKLPPILSKTIIDKFAAVGILQGYLDYFNRKSDLEE
        DDLCKTGKLEGVKYTFW+ECFTSKNVELLIKPL L P +SKTIIDKFAAVGILQGYLDYFNR+ +L E
Subjt:  DDLCKTGKLEGVKYTFWNECFTSKNVELLIKPLKLPPILSKTIIDKFAAVGILQGYLDYFNRKSDLEE

A0A1S3ATQ4 putative pre-16S rRNA nuclease isoform X13.9e-6978.57Show/hide
Query:  MKYVKPLNLFHDLLKRNALERGRFLGLDVGDKYVGLAVSDPDNKIASPLSVLLRKKTNMHLVAQDFQRLISELSLAGFIVGYPFDGKRPNADAVQVKIFI
        MKYVKP  LF DLLKR+ L+  R LGLDVGDKYVGLAVSDPDNKIASPLSVLLRKK  M L+A+DFQ+LISE SLAGFIVGYPFD  R N +A+QVKIFI
Subjt:  MKYVKPLNLFHDLLKRNALERGRFLGLDVGDKYVGLAVSDPDNKIASPLSVLLRKKTNMHLVAQDFQRLISELSLAGFIVGYPFDGKRPNADAVQVKIFI

Query:  DDLCKTGKLEGVKYTFWNECFTSKNVELLIKPLKLPPILSKTIIDKFAAVGILQGYLDYFNRKSDLEE
        DDLCKTGKLEGVKYTFW+E FTSKNVE +IKPL L P +SKT++DKFAAVGILQGYLDYFNR+ +L E
Subjt:  DDLCKTGKLEGVKYTFWNECFTSKNVELLIKPLKLPPILSKTIIDKFAAVGILQGYLDYFNRKSDLEE

A0A6J1E3H7 uncharacterized protein LOC1110261457.8e-7887.35Show/hide
Query:  MKYVKPLNLFHDLLKRNALERGRFLGLDVGDKYVGLAVSDPDNKIASPLSVLLRKKTNMHLVAQDFQRLISELSLAGFIVGYPFDGKRPNADAVQVKIFI
        MKYVKPLN+F DLL RN LERGRFLGLDVGDKYVGLAVSDPDN IASPLSVLLRKKT MHL+A+D QRLISELSLAGFIVGYPFD +R NADAVQVKIFI
Subjt:  MKYVKPLNLFHDLLKRNALERGRFLGLDVGDKYVGLAVSDPDNKIASPLSVLLRKKTNMHLVAQDFQRLISELSLAGFIVGYPFDGKRPNADAVQVKIFI

Query:  DDLCKTGKLEGVKYTFWNECFTSKNVELLIKPLKLPPILSKTIIDKFAAVGILQGYLDYFNRKSDL
        DDLCKTG LEGVKYTFW+ECFTSKNVELLIKPL+LPP+LSKTI+DKFAAVGILQGYLDY NR+ +L
Subjt:  DDLCKTGKLEGVKYTFWNECFTSKNVELLIKPLKLPPILSKTIIDKFAAVGILQGYLDYFNRKSDL

A0A6J1H0B7 uncharacterized protein LOC1114592533.6e-8391.12Show/hide
Query:  MKYVKPLNLFHDLLKRNALERGRFLGLDVGDKYVGLAVSDPDNKIASPLSVLLRKKTNMHLVAQDFQRLISELSLAGFIVGYPFDGKRPNADAVQVKIFI
        MKYV+PLNLF DLLK NALERGRFLGLDVGDKYVGLAVSDPDNKIASPLSVL RKKTNMHL+A DFQRLISELSL+GFIVGYPFDG+R NADAVQVKIFI
Subjt:  MKYVKPLNLFHDLLKRNALERGRFLGLDVGDKYVGLAVSDPDNKIASPLSVLLRKKTNMHLVAQDFQRLISELSLAGFIVGYPFDGKRPNADAVQVKIFI

Query:  DDLCKTGKLEGVKYTFWNECFTSKNVELLIKPLKLPPILSKTIIDKFAAVGILQGYLDYFNRKSDLEER
        DDLCKTGKLEGVKYTFW+ECFTSKNVELLIKPLKLPPILSKTIIDKFAAVGILQGYLD+FNR+ +L+ER
Subjt:  DDLCKTGKLEGVKYTFWNECFTSKNVELLIKPLKLPPILSKTIIDKFAAVGILQGYLDYFNRKSDLEER

A0A6J1K3L4 uncharacterized protein LOC1114908571.6e-8391.72Show/hide
Query:  MKYVKPLNLFHDLLKRNALERGRFLGLDVGDKYVGLAVSDPDNKIASPLSVLLRKKTNMHLVAQDFQRLISELSLAGFIVGYPFDGKRPNADAVQVKIFI
        MKYV+PLNLF DLLK NALERGRFLGLDVGDKYVGLAVSDPDNKIASPLSVL RKKTNMHL+A DFQRLISELSL+GFIVGYPFDG+R NADAVQVKIFI
Subjt:  MKYVKPLNLFHDLLKRNALERGRFLGLDVGDKYVGLAVSDPDNKIASPLSVLLRKKTNMHLVAQDFQRLISELSLAGFIVGYPFDGKRPNADAVQVKIFI

Query:  DDLCKTGKLEGVKYTFWNECFTSKNVELLIKPLKLPPILSKTIIDKFAAVGILQGYLDYFNRKSDLEER
        DDLCKTGKLEGVKYTFW+ECFTSKNVELLIKPLKLPPILSKTIIDKFAAVGILQGYLD+FNR+ +LEER
Subjt:  DDLCKTGKLEGVKYTFWNECFTSKNVELLIKPLKLPPILSKTIIDKFAAVGILQGYLDYFNRKSDLEER

SwissProt top hitse value%identityAlignment
A4XKC6 Putative pre-16S rRNA nuclease3.8e-1332.14Show/hide
Query:  RFLGLDVGDKYVGLAVSDPDNKIASPLSVLLRKKTNMHLVAQDFQRLISELSLAGFIVGYPFDGKRPNADAVQVKIFIDDLC-KTGKLEGVKYTFWNECF
        R L LD+G + +G+A+SDP    A P  VL  +K +++       ++ +E  +   ++GYP     P+  A +    ID++C +  +   V    W+E F
Subjt:  RFLGLDVGDKYVGLAVSDPDNKIASPLSVLLRKKTNMHLVAQDFQRLISELSLAGFIVGYPFDGKRPNADAVQVKIFIDDLC-KTGKLEGVKYTFWNECF

Query:  TSKNVELLIKPLKLPPILSKTIIDKFAAVGILQGYLDYFN
        ++K VE +++   +     K ++DK AAV ILQGYLD+ N
Subjt:  TSKNVELLIKPLKLPPILSKTIIDKFAAVGILQGYLDYFN

B6IN25 Putative pre-16S rRNA nuclease2.5e-1232.43Show/hide
Query:  LKRNALERGRFLGLDVGDKYVGLAVSDPDNKIASPLSVLLRKKTNMHLVAQDFQRLISELSLAGFIVGYPFDGKRPNADAVQ-VKIFIDDLCKTGKLEGV
        LK +    GR +GLD+G+K +GLAVSDP   +ASP+  + R K      AQ+  R + +  +   +VG P +         Q V+ F   L +  +L G 
Subjt:  LKRNALERGRFLGLDVGDKYVGLAVSDPDNKIASPLSVLLRKKTNMHLVAQDFQRLISELSLAGFIVGYPFDGKRPNADAVQ-VKIFIDDLCKTGKLEGV

Query:  --KYTFWNECFTSKNVELLIKPLKLPPILSKTIIDKFAAVGILQGYLD
          +  FW+E  ++  VE ++    +       ++DK AA  ILQG LD
Subjt:  --KYTFWNECFTSKNVELLIKPLKLPPILSKTIIDKFAAVGILQGYLD

B8I4S7 Putative pre-16S rRNA nuclease1.6e-1130.61Show/hide
Query:  RFLGLDVGDKYVGLAVSDPDNKIASPLSVLLRKKTNMHLVAQDFQRLISELSLAGFIVGYPFD---GKRPNADAVQVKIFIDDLCKTGKLEGVKYTFWNE
        R LG+D GD  +G+A+SDP    A  L  +++ K ++         +I+E S+   ++GYP +    K P  +  + + FI  +   G+   +K   W+E
Subjt:  RFLGLDVGDKYVGLAVSDPDNKIASPLSVLLRKKTNMHLVAQDFQRLISELSLAGFIVGYPFD---GKRPNADAVQVKIFIDDLCKTGKLEGVKYTFWNE

Query:  CFTSKNVELLIKPLKLPPILSKTIIDKFAAVGILQGYLDYF--NRKS
          T+ +    +  L +     K I+D  +AV ILQGYLD    N+KS
Subjt:  CFTSKNVELLIKPLKLPPILSKTIIDKFAAVGILQGYLDYF--NRKS

B9MRK7 Putative pre-16S rRNA nuclease2.2e-1334.29Show/hide
Query:  RFLGLDVGDKYVGLAVSDPDNKIASP-LSVLLRKKTNMHLVAQDFQRLISELSLAGFIVGYPFDGKRPNADAVQVKIFIDDLCKTGKLEGVKYTFWNECF
        R L LD+G+  VG+A+SDP    A P +++ LR K     + ++  ++    ++   ++GYP     P+    ++K   +   K G    V+   W+E F
Subjt:  RFLGLDVGDKYVGLAVSDPDNKIASP-LSVLLRKKTNMHLVAQDFQRLISELSLAGFIVGYPFDGKRPNADAVQVKIFIDDLCKTGKLEGVKYTFWNECF

Query:  TSKNVELLIKPLKLPPILSKTIIDKFAAVGILQGYLDYFN
        ++K VE +I   +L     K IIDK AAV ILQGYLD++N
Subjt:  TSKNVELLIKPLKLPPILSKTIIDKFAAVGILQGYLDYFN

C4Z578 Putative pre-16S rRNA nuclease5.5e-1230.66Show/hide
Query:  RFLGLDVGDKYVGLAVSDPDNKIASPLSVLLRKKTN-MHLVAQDFQRLISELSLAGFIVGYPFDGKRPNADAVQVKIFIDDLCKTGKLEGVKYTFWNECF
        R +GLDVG K VG+A+SDP    A P   + RK+ N +       +++ISE  +   +VGYP      +    + K   +      +  G+  T W+E  
Subjt:  RFLGLDVGDKYVGLAVSDPDNKIASPLSVLLRKKTN-MHLVAQDFQRLISELSLAGFIVGYPFDGKRPNADAVQVKIFIDDLCKTGKLEGVKYTFWNECF

Query:  TSKNVELLIKPLKLPPILSKTIIDKFAAVGILQGYLD
        T+   + +++   +     KT+ID+ AAV IL+GY++
Subjt:  TSKNVELLIKPLKLPPILSKTIIDKFAAVGILQGYLD

Arabidopsis top hitse value%identityAlignment
AT3G52905.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein2.8e-5158.68Show/hide
Query:  MKYVKPLNLFHDLLKRNALERGRFLGLDVGDKYVGLAVSDPDNKIASPLSVLLRKKTNMHLVAQDFQRLISELSLAGFIVGYPFDGKRPNADAVQVKIFI
        MKYVKPL+L  + LK      GRFLGLDVGDKYVGLA+SDP N +ASPLSVLLRKK+N+ L+A DFQ L+   S++G +VGYPF       D V V +FI
Subjt:  MKYVKPLNLFHDLLKRNALERGRFLGLDVGDKYVGLAVSDPDNKIASPLSVLLRKKTNMHLVAQDFQRLISELSLAGFIVGYPFDGKRPNADAVQVKIFI

Query:  DDLCKTGKLEGVKYTFWNECFTSKNVELLIKPLKLPPILSKTIIDKFAAVGILQGYLDYFNRKSDLE
        ++L KT KL+ VKYT+W+E  +SK VEL++KPL L P+  KT++DK AAV ILQ YLDY NR  + E
Subjt:  DDLCKTGKLEGVKYTFWNECFTSKNVELLIKPLKLPPILSKTIIDKFAAVGILQGYLDYFNRKSDLE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGTACGTGAAGCCATTGAACTTGTTTCACGATTTATTGAAGAGAAATGCCCTTGAACGTGGCCGTTTTCTCGGTTTGGATGTTGGTGATAAGTATGTTGGTTTGGC
CGTCTCTGACCCGGATAATAAAATCGCCTCACCTCTTAGTGTTTTGCTCAGGAAGAAAACAAACATGCATTTGGTGGCTCAGGATTTTCAGAGATTGATCTCTGAACTCT
CTTTGGCGGGGTTCATTGTTGGGTACCCTTTCGATGGAAAACGACCCAACGCCGATGCTGTGCAAGTGAAGATCTTCATTGACGACCTTTGTAAAACTGGAAAACTTGAA
GGTGTAAAATATACCTTTTGGAATGAGTGCTTTACATCAAAGAATGTGGAACTACTGATAAAGCCATTGAAACTGCCTCCTATTTTGTCAAAGACAATAATTGACAAGTT
TGCTGCTGTTGGAATACTTCAGGGTTACTTGGATTATTTTAACAGAAAATCAGATTTGGAAGAGAGGTAG
mRNA sequenceShow/hide mRNA sequence
ATGAAGTACGTGAAGCCATTGAACTTGTTTCACGATTTATTGAAGAGAAATGCCCTTGAACGTGGCCGTTTTCTCGGTTTGGATGTTGGTGATAAGTATGTTGGTTTGGC
CGTCTCTGACCCGGATAATAAAATCGCCTCACCTCTTAGTGTTTTGCTCAGGAAGAAAACAAACATGCATTTGGTGGCTCAGGATTTTCAGAGATTGATCTCTGAACTCT
CTTTGGCGGGGTTCATTGTTGGGTACCCTTTCGATGGAAAACGACCCAACGCCGATGCTGTGCAAGTGAAGATCTTCATTGACGACCTTTGTAAAACTGGAAAACTTGAA
GGTGTAAAATATACCTTTTGGAATGAGTGCTTTACATCAAAGAATGTGGAACTACTGATAAAGCCATTGAAACTGCCTCCTATTTTGTCAAAGACAATAATTGACAAGTT
TGCTGCTGTTGGAATACTTCAGGGTTACTTGGATTATTTTAACAGAAAATCAGATTTGGAAGAGAGGTAG
Protein sequenceShow/hide protein sequence
MKYVKPLNLFHDLLKRNALERGRFLGLDVGDKYVGLAVSDPDNKIASPLSVLLRKKTNMHLVAQDFQRLISELSLAGFIVGYPFDGKRPNADAVQVKIFIDDLCKTGKLE
GVKYTFWNECFTSKNVELLIKPLKLPPILSKTIIDKFAAVGILQGYLDYFNRKSDLEER