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Lag0032743 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0032743
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionB-like cyclin
Genome locationchr11:36972751..36973157
RNA-Seq ExpressionLag0032743
SyntenyLag0032743
Gene Ontology termsGO:0000079 - regulation of cyclin-dependent protein serine/threonine kinase activity (biological process)
GO:0044772 - mitotic cell cycle phase transition (biological process)
GO:0051301 - cell division (biological process)
GO:0000307 - cyclin-dependent protein kinase holoenzyme complex (cellular component)
GO:0005634 - nucleus (cellular component)
GO:0005737 - cytoplasm (cellular component)
GO:0016538 - cyclin-dependent protein serine/threonine kinase regulator activity (molecular function)
InterPro domainsIPR006671 - Cyclin, N-terminal
IPR013763 - Cyclin-like
IPR036915 - Cyclin-like superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8649027.1 hypothetical protein Csa_015003 [Cucumis sativus]4.2e-1239.16Show/hide
Query:  MSLSPNHYAASSSSSSGVGCHLTAHFLTSTTADYPIYDAPAIFKLFQSELEHIPR---------------TRLISLLW----------------------
        MSLSP+H++ +SSSSS      ++HFL S+  D+P+ D   IF L QS+L H+PR                R  S+ W                      
Subjt:  MSLSPNHYAASSSSSSGVGCHLTAHFLTSTTADYPIYDAPAIFKLFQSELEHIPR---------------TRLISLLW----------------------

Query:  -----------PNGWSFQLLSVACLSLATKMEEPHVPLLSDLR
                    NGW+FQLLSVACLSLA KMEEP VPLL DL+
Subjt:  -----------PNGWSFQLLSVACLSLATKMEEPHVPLLSDLR
XP_004150260.1 cyclin-D4-1 [Cucumis sativus]4.2e-1239.16Show/hide
Query:  MSLSPNHYAASSSSSSGVGCHLTAHFLTSTTADYPIYDAPAIFKLFQSELEHIPR---------------TRLISLLW----------------------
        MSLSP+H++ +SSSSS      ++HFL S+  D+P+ D   IF L QS+L H+PR                R  S+ W                      
Subjt:  MSLSPNHYAASSSSSSGVGCHLTAHFLTSTTADYPIYDAPAIFKLFQSELEHIPR---------------TRLISLLW----------------------

Query:  -----------PNGWSFQLLSVACLSLATKMEEPHVPLLSDLR
                    NGW+FQLLSVACLSLA KMEEP VPLL DL+
Subjt:  -----------PNGWSFQLLSVACLSLATKMEEPHVPLLSDLR
XP_008454410.1 PREDICTED: cyclin-D4-2-like [Cucumis melo]1.6e-1139.73Show/hide
Query:  MSLSPNHY---AASSSSSSGVGCHLTAHFLTSTTADYPIYDAPAIFKLFQSELEHIPR---------------TRLISLLW-------------------
        MSLSP+H+   ++SSSSSS      ++HFL S   D+PI D   I  L QSEL H+PR                R  S+ W                   
Subjt:  MSLSPNHY---AASSSSSSGVGCHLTAHFLTSTTADYPIYDAPAIFKLFQSELEHIPR---------------TRLISLLW-------------------

Query:  --------------PNGWSFQLLSVACLSLATKMEEPHVPLLSDLR
                       NGW+FQLLSVACLSLA KMEEP VPLL DL+
Subjt:  --------------PNGWSFQLLSVACLSLATKMEEPHVPLLSDLR
XP_023552812.1 cyclin-D2-1-like [Cucurbita pepo subsp. pepo]4.7e-1141.26Show/hide
Query:  MSLSPNHYAASSSSSSGVGCHLTAHFLTSTTADYPIYDAPAIFKLFQSELEHIPR---------------TRLISLLW----------------------
        MSLSP+  + +SSSSSG   H++A  L ST AD  I D  AIF L QSEL+H+PR                R  S+ W                      
Subjt:  MSLSPNHYAASSSSSSGVGCHLTAHFLTSTTADYPIYDAPAIFKLFQSELEHIPR---------------TRLISLLW----------------------

Query:  -----------PNGWSFQLLSVACLSLATKMEEPHVPLLSDLR
                    NGW FQLL+VACLSLA KMEEP VPLL DL+
Subjt:  -----------PNGWSFQLLSVACLSLATKMEEPHVPLLSDLR
XP_038903710.1 cyclin-D2-2-like [Benincasa hispida]4.8e-1644.06Show/hide
Query:  MSLSPNHYAASSSSSSGVGCHLTAHFLTSTTADYPIYDAPAIFKLFQSELEHIPR---------------TRLISLLW----------------------
        MSLSP H++A+SSSSSG G H+ A FL S  AD+PI D  AIF L QSEL+H+PR                R  S+ W                      
Subjt:  MSLSPNHYAASSSSSSGVGCHLTAHFLTSTTADYPIYDAPAIFKLFQSELEHIPR---------------TRLISLLW----------------------

Query:  -----------PNGWSFQLLSVACLSLATKMEEPHVPLLSDLR
                    NGW+FQLLSVACLS+A KMEEP VPLL DL+
Subjt:  -----------PNGWSFQLLSVACLSLATKMEEPHVPLLSDLR
TrEMBL top hitse value%identityAlignment
A0A0A0KSY9 B-like cyclin2.0e-1239.16Show/hide
Query:  MSLSPNHYAASSSSSSGVGCHLTAHFLTSTTADYPIYDAPAIFKLFQSELEHIPR---------------TRLISLLW----------------------
        MSLSP+H++ +SSSSS      ++HFL S+  D+P+ D   IF L QS+L H+PR                R  S+ W                      
Subjt:  MSLSPNHYAASSSSSSGVGCHLTAHFLTSTTADYPIYDAPAIFKLFQSELEHIPR---------------TRLISLLW----------------------

Query:  -----------PNGWSFQLLSVACLSLATKMEEPHVPLLSDLR
                    NGW+FQLLSVACLSLA KMEEP VPLL DL+
Subjt:  -----------PNGWSFQLLSVACLSLATKMEEPHVPLLSDLR
A0A1S3BY27 B-like cyclin7.8e-1239.73Show/hide
Query:  MSLSPNHY---AASSSSSSGVGCHLTAHFLTSTTADYPIYDAPAIFKLFQSELEHIPR---------------TRLISLLW-------------------
        MSLSP+H+   ++SSSSSS      ++HFL S   D+PI D   I  L QSEL H+PR                R  S+ W                   
Subjt:  MSLSPNHY---AASSSSSSGVGCHLTAHFLTSTTADYPIYDAPAIFKLFQSELEHIPR---------------TRLISLLW-------------------

Query:  --------------PNGWSFQLLSVACLSLATKMEEPHVPLLSDLR
                       NGW+FQLLSVACLSLA KMEEP VPLL DL+
Subjt:  --------------PNGWSFQLLSVACLSLATKMEEPHVPLLSDLR
A0A6J1EA34 B-like cyclin8.6e-1141.26Show/hide
Query:  MSLSPNHYAASSSSSSGVGCHLTAHFLTSTTADYPIYDAPAIFKLFQSELEHIPR---------------TRLISLLW----------------------
        MSLSP+   ASSSSS     H++A  L ST AD  I D  AIF L QSEL+H+PR                R  S+ W                      
Subjt:  MSLSPNHYAASSSSSSGVGCHLTAHFLTSTTADYPIYDAPAIFKLFQSELEHIPR---------------TRLISLLW----------------------

Query:  -----------PNGWSFQLLSVACLSLATKMEEPHVPLLSDLR
                    NGW FQLL+VACLSLA KMEEP VPLL DL+
Subjt:  -----------PNGWSFQLLSVACLSLATKMEEPHVPLLSDLR
A0A6J1JBE4 B-like cyclin3.0e-1141.26Show/hide
Query:  MSLSPNHYAASSSSSSGVGCHLTAHFLTSTTADYPIYDAPAIFKLFQSELEHIPR---------------TRLISLLW----------------------
        MSLSP+  + +SSSSSG   H++A  L ST AD  I D  AIF L QSEL+H+PR                R  S+ W                      
Subjt:  MSLSPNHYAASSSSSSGVGCHLTAHFLTSTTADYPIYDAPAIFKLFQSELEHIPR---------------TRLISLLW----------------------

Query:  -----------PNGWSFQLLSVACLSLATKMEEPHVPLLSDLR
                    NGW FQLL+VACLSLA KMEEP VPLL DL+
Subjt:  -----------PNGWSFQLLSVACLSLATKMEEPHVPLLSDLR
E5GBG8 B-like cyclin7.8e-1239.73Show/hide
Query:  MSLSPNHY---AASSSSSSGVGCHLTAHFLTSTTADYPIYDAPAIFKLFQSELEHIPR---------------TRLISLLW-------------------
        MSLSP+H+   ++SSSSSS      ++HFL S   D+PI D   I  L QSEL H+PR                R  S+ W                   
Subjt:  MSLSPNHY---AASSSSSSGVGCHLTAHFLTSTTADYPIYDAPAIFKLFQSELEHIPR---------------TRLISLLW-------------------

Query:  --------------PNGWSFQLLSVACLSLATKMEEPHVPLLSDLR
                       NGW+FQLLSVACLSLA KMEEP VPLL DL+
Subjt:  --------------PNGWSFQLLSVACLSLATKMEEPHVPLLSDLR
SwissProt top hitse value%identityAlignment
Q0J233 Cyclin-D2-15.7e-0449.02Show/hide
Query:  LEHIPRTRLISLLWPNGWSFQLLSVACLSLATKMEEPHVPLLSDLRCRRQR
        L H+P  +        GW+ QLL+VACLSLA KMEE  VP L DL+    R
Subjt:  LEHIPRTRLISLLWPNGWSFQLLSVACLSLATKMEEPHVPLLSDLRCRRQR
Q8H339 Cyclin-D1-29.8e-0458.33Show/hide
Query:  NGWSFQLLSVACLSLATKMEEPHVPLLSDLRCRRQR
        NGW+ QLL+V CLSLA KMEE  VP + DL+    R
Subjt:  NGWSFQLLSVACLSLATKMEEPHVPLLSDLRCRRQR
Q8LGA1 Cyclin-D4-17.5e-0466.67Show/hide
Query:  GWSFQLLSVACLSLATKMEEPHVPLLSDLR
        GW  QLL+VACLSLA K+EE  VP+L DL+
Subjt:  GWSFQLLSVACLSLATKMEEPHVPLLSDLR
Arabidopsis top hitse value%identityAlignment
AT1G70210.1 CYCLIN D1;13.5e-0464.52Show/hide
Query:  NGWSFQLLSVACLSLATKMEEPHVPLLSDLR
        +GW  QLL+VACLSLA KMEE  VP L D +
Subjt:  NGWSFQLLSVACLSLATKMEEPHVPLLSDLR
AT4G34160.1 CYCLIN D3;14.5e-0465.52Show/hide
Query:  WSFQLLSVACLSLATKMEEPHVPLLSDLR
        W  QL+SVACLSLA K+EE  VPLL D +
Subjt:  WSFQLLSVACLSLATKMEEPHVPLLSDLR
AT5G65420.1 CYCLIN D4;15.3e-0566.67Show/hide
Query:  GWSFQLLSVACLSLATKMEEPHVPLLSDLR
        GW  QLL+VACLSLA K+EE  VP+L DL+
Subjt:  GWSFQLLSVACLSLATKMEEPHVPLLSDLR
AT5G65420.2 CYCLIN D4;15.3e-0566.67Show/hide
Query:  GWSFQLLSVACLSLATKMEEPHVPLLSDLR
        GW  QLL+VACLSLA K+EE  VP+L DL+
Subjt:  GWSFQLLSVACLSLATKMEEPHVPLLSDLR
AT5G65420.3 CYCLIN D4;15.3e-0566.67Show/hide
Query:  GWSFQLLSVACLSLATKMEEPHVPLLSDLR
        GW  QLL+VACLSLA K+EE  VP+L DL+
Subjt:  GWSFQLLSVACLSLATKMEEPHVPLLSDLR

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTCTCTCTCCTAACCATTACGCCGCTTCCTCTTCTTCATCCTCCGGCGTCGGTTGCCACCTCACCGCCCACTTTCTCACTTCCACCACGGCGGACTACCCGATCTA
CGATGCTCCAGCCATTTTCAAGCTTTTCCAATCGGAGCTCGAACACATCCCTAGGACTCGATTGATTTCCTTACTGTGGCCGAATGGTTGGTCGTTTCAGCTTCTATCGG
TGGCGTGTTTGTCTCTAGCGACGAAAATGGAGGAACCTCATGTCCCACTGCTTTCGGACCTCCGCTGCAGACGACAGCGGCGATGGCGATAG
mRNA sequenceShow/hide mRNA sequence
ATGTCTCTCTCTCCTAACCATTACGCCGCTTCCTCTTCTTCATCCTCCGGCGTCGGTTGCCACCTCACCGCCCACTTTCTCACTTCCACCACGGCGGACTACCCGATCTA
CGATGCTCCAGCCATTTTCAAGCTTTTCCAATCGGAGCTCGAACACATCCCTAGGACTCGATTGATTTCCTTACTGTGGCCGAATGGTTGGTCGTTTCAGCTTCTATCGG
TGGCGTGTTTGTCTCTAGCGACGAAAATGGAGGAACCTCATGTCCCACTGCTTTCGGACCTCCGCTGCAGACGACAGCGGCGATGGCGATAG
Protein sequenceShow/hide protein sequence
MSLSPNHYAASSSSSSGVGCHLTAHFLTSTTADYPIYDAPAIFKLFQSELEHIPRTRLISLLWPNGWSFQLLSVACLSLATKMEEPHVPLLSDLRCRRQRRWR